Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_GAQ_versus_KO_NA.greenbergcls.cls
#KO_GAQ_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetCHR20P11
Enrichment Score (ES)-0.64954287
Normalized Enrichment Score (NES)-1.4200438
Nominal p-value0.0034013605
FDR q-value0.3168072
FWER p-Value0.828
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR20P11   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SEC23BSEC23 homolog B, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10702]11721.2810.0033No
2POLR3FRNA polymerase III subunit F [Source:HGNC Symbol;Acc:HGNC:15763]21260.8480.0007No
3MED28P7mediator complex subunit 28 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:45084]31280.566-0.0109No
4NAA20N-alpha-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]34880.491-0.0072No
5EIF4E2P1eukaryotic translation initiation factor 4E family member 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16237]34950.4900.0060No
6RALGAPA2Ral GTPase activating protein catalytic subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:16207]46730.283-0.0181No
7NXT1nuclear transport factor 2 like export factor 1 [Source:HGNC Symbol;Acc:HGNC:15913]47370.274-0.0123No
8CD93CD93 molecule [Source:HGNC Symbol;Acc:HGNC:15855]47580.271-0.0055No
9PPIAP2peptidylprolyl isomerase A pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:16542]47770.2680.0014No
10XRN25'-3' exoribonuclease 2 [Source:HGNC Symbol;Acc:HGNC:12836]57390.126-0.0212No
11NCOR1P1NCOR1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16724]58520.114-0.0211No
12MRPS11P1mitochondrial ribosomal protein S11 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16584]60080.092-0.0228No
13THBDthrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784]62170.065-0.0266No
14EEF1A1P34eukaryotic translation elongation factor 1 alpha 1 pseudogene 34 [Source:HGNC Symbol;Acc:HGNC:37912]66080.012-0.0369No
15LINC01431long intergenic non-protein coding RNA 1431 [Source:HGNC Symbol;Acc:HGNC:50744]70580.000-0.0490No
16LINC01427long intergenic non-protein coding RNA 1427 [Source:HGNC Symbol;Acc:HGNC:50737]70680.000-0.0493No
17LINC01432long intergenic non-protein coding RNA 1432 [Source:HGNC Symbol;Acc:HGNC:50745]71290.000-0.0509No
18RNU2-56PRNA, U2 small nuclear 56, pseudogene [Source:HGNC Symbol;Acc:HGNC:48549]78650.000-0.0708No
19RNU6-192PRNA, U6 small nuclear 192, pseudogene [Source:HGNC Symbol;Acc:HGNC:47155]82200.000-0.0804No
20KIZ-AS1KIZ antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51231]86810.000-0.0928No
21ZNF133zinc finger protein 133 [Source:HGNC Symbol;Acc:HGNC:12917]96660.000-0.1194No
22BSNDP2BSND pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:51537]99690.000-0.1276No
23BSNDP1BSND pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:51536]99710.000-0.1276No
24BSNDP3BSND pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:51538]99740.000-0.1277No
25RN7SL690PRNA, 7SL, cytoplasmic 690, pseudogene [Source:HGNC Symbol;Acc:HGNC:46706]99970.000-0.1283No
26AL133464.1novel transcript102880.000-0.1361No
27CYB5AP4cytochrome b5 type A pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:2575]104020.000-0.1392No
28KRT18P3keratin 18 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:16540]105310.000-0.1426No
29RNU7-137PRNA, U7 small nuclear 137 pseudogene [Source:HGNC Symbol;Acc:HGNC:45671]106950.000-0.1471No
30SCP2D1-AS1SCP2D1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:16210]108340.000-0.1508No
31OVOL2ovo like zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:15804]109710.000-0.1545No
32FAM182Bfamily with sequence similarity 182 member B [Source:HGNC Symbol;Acc:HGNC:34503]109930.000-0.1550No
33FAM182Afamily with sequence similarity 182 member A [Source:HGNC Symbol;Acc:HGNC:16222]109940.000-0.1550No
34GGTLC1gamma-glutamyltransferase light chain 1 [Source:HGNC Symbol;Acc:HGNC:16437]111200.000-0.1584No
35GAPDHP53glyceraldehyde 3 phosphate dehydrogenase pseudogene 53 [Source:HGNC Symbol;Acc:HGNC:38559]111300.000-0.1587No
36SSTR4somatostatin receptor 4 [Source:HGNC Symbol;Acc:HGNC:11333]118570.000-0.1783No
37LNCNEFlncRNA neighboring enhancer of FOXA2 [Source:HGNC Symbol;Acc:HGNC:50656]119580.000-0.1810No
38AL035252.2novel transcript126790.000-0.2005No
39VN1R108Pvomeronasal 1 receptor 108 pseudogene [Source:HGNC Symbol;Acc:HGNC:37432]127900.000-0.2035No
40SLC25A6P1solute carrier family 25 member 6 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16554]129590.000-0.2080No
41CST13Pcystatin 13, pseudogene [Source:HGNC Symbol;Acc:HGNC:44335]131520.000-0.2132No
42CST12Pcystatin 12, pseudogene [Source:HGNC Symbol;Acc:HGNC:31920]133170.000-0.2177No
43LINC00261long intergenic non-protein coding RNA 261 [Source:HGNC Symbol;Acc:HGNC:16189]134350.000-0.2208No
44LINC00237long intergenic non-protein coding RNA 237 [Source:HGNC Symbol;Acc:HGNC:38166]135370.000-0.2236No
45VSX1visual system homeobox 1 [Source:HGNC Symbol;Acc:HGNC:12723]148120.000-0.2580No
46PAX1paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]149900.000-0.2628No
47RN7SL607PRNA, 7SL, cytoplasmic 607, pseudogene [Source:HGNC Symbol;Acc:HGNC:46623]154490.000-0.2752No
48ZNF337-AS1ZNF337 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40759]163840.000-0.3005No
49RN7SL594PRNA, 7SL, cytoplasmic 594, pseudogene [Source:HGNC Symbol;Acc:HGNC:46610]165070.000-0.3038No
50RNU6ATAC17PRNA, U6atac small nuclear 17, pseudogene [Source:HGNC Symbol;Acc:HGNC:46916]170800.000-0.3193No
51GSTM3P1glutathione S-transferase mu 3 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16606]171920.000-0.3223No
52SCP2D1SCP2 sterol binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16211]172440.000-0.3237No
53RNA5SP477RNA, 5S ribosomal pseudogene 477 [Source:HGNC Symbol;Acc:HGNC:43377]174420.000-0.3290No
54RNA5SP476RNA, 5S ribosomal pseudogene 476 [Source:HGNC Symbol;Acc:HGNC:43376]174430.000-0.3290No
55RNA5SP479RNA, 5S ribosomal pseudogene 479 [Source:HGNC Symbol;Acc:HGNC:43379]174470.000-0.3291No
56RNA5SP478RNA, 5S ribosomal pseudogene 478 [Source:HGNC Symbol;Acc:HGNC:43378]174480.000-0.3291No
57GCNT1P1glucosaminyl (N-acetyl) transferase 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16532]175110.000-0.3307No
58RNU6ATAC34PRNA, U6atac small nuclear 34, pseudogene [Source:HGNC Symbol;Acc:HGNC:46933]175450.000-0.3316No
59CST11cystatin 11 [Source:HGNC Symbol;Acc:HGNC:15959]181520.000-0.3480No
60NKX2-2-AS1NKX2-2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:37154]182750.000-0.3513No
61CSTP2cystatin pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:2487]184530.000-0.3561No
62CSTP1cystatin pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:2486]184540.000-0.3561No
63CSTL1cystatin like 1 [Source:HGNC Symbol;Acc:HGNC:15958]185010.000-0.3574No
64RN7SL14PRNA, 7SL, cytoplasmic 14, pseudogene [Source:HGNC Symbol;Acc:HGNC:46030]185720.000-0.3593No
65CST9Lcystatin 9 like [Source:HGNC Symbol;Acc:HGNC:16233]187310.000-0.3635No
66RN7SKP74RN7SK pseudogene 74 [Source:HGNC Symbol;Acc:HGNC:45798]187760.000-0.3647No
67NKX2-4NK2 homeobox 4 [Source:HGNC Symbol;Acc:HGNC:7837]191830.000-0.3757No
68NKX2-2NK2 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:7835]191850.000-0.3757No
69DUXAP7double homeobox A pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:32186]192890.000-0.3785No
70SMIM26small integral membrane protein 26 [Source:HGNC Symbol;Acc:HGNC:43430]196830.000-0.3892No
71CST2P1cystatin SA pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:45042]197170.000-0.3901No
72LINC01747long intergenic non-protein coding RNA 1747 [Source:HGNC Symbol;Acc:HGNC:52536]198460.000-0.3935No
73LINC01733long intergenic non-protein coding RNA 1733 [Source:HGNC Symbol;Acc:HGNC:52521]198640.000-0.3940No
74LINC01727long intergenic non-protein coding RNA 1727 [Source:HGNC Symbol;Acc:HGNC:52515]199350.000-0.3959No
75LINC01726long intergenic non-protein coding RNA 1726 [Source:HGNC Symbol;Acc:HGNC:52514]199360.000-0.3959No
76LINC01721long intergenic non-protein coding RNA 1721 [Source:HGNC Symbol;Acc:HGNC:52508]199440.000-0.3961No
77LLPHP1LLPH pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:50491]202320.000-0.4038No
78RN7SKP140RN7SK pseudogene 140 [Source:HGNC Symbol;Acc:HGNC:45864]204060.000-0.4085No
79MIR3192microRNA 3192 [Source:HGNC Symbol;Acc:HGNC:38202]212180.000-0.4305No
80INSM1INSM transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:6090]219000.000-0.4489No
81RN7SL638PRNA, 7SL, cytoplasmic 638, pseudogene [Source:HGNC Symbol;Acc:HGNC:46654]219250.000-0.4495No
82SYNDIG1synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]221290.000-0.4550No
83POM121L3PPOM121 transmembrane nucleoporin like 3, pseudogene [Source:HGNC Symbol;Acc:HGNC:16440]221680.000-0.4561No
84SNORD17small nucleolar RNA, C/D box 17 [Source:HGNC Symbol;Acc:HGNC:32713]223210.000-0.4602No
85MIR663AHGMIR663A host gene [Source:HGNC Symbol;Acc:HGNC:27662]224570.000-0.4638No
86ZNF337zinc finger protein 337 [Source:HGNC Symbol;Acc:HGNC:15809]225000.000-0.4650No
87RPL41P1ribosomal protein L41 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:10356]225470.000-0.4662No
88LINC00851long intergenic non-protein coding RNA 851 [Source:HGNC Symbol;Acc:HGNC:43424]231980.000-0.4838No
89CFAP61cilia and flagella associated protein 61 [Source:HGNC Symbol;Acc:HGNC:15872]234520.000-0.4906No
90FOXA2forkhead box A2 [Source:HGNC Symbol;Acc:HGNC:5022]237130.000-0.4977No
91ZNF877Pzinc finger protein 877, pseudogene [Source:HGNC Symbol;Acc:HGNC:38697]238520.000-0.5014No
92CST9cystatin 9 [Source:HGNC Symbol;Acc:HGNC:13261]247560.000-0.5258No
93CST8cystatin 8 [Source:HGNC Symbol;Acc:HGNC:2480]247570.000-0.5258No
94CST5cystatin D [Source:HGNC Symbol;Acc:HGNC:2477]247600.000-0.5259No
95CST4cystatin S [Source:HGNC Symbol;Acc:HGNC:2476]247610.000-0.5259No
96CST3cystatin C [Source:HGNC Symbol;Acc:HGNC:2475]247620.000-0.5259No
97CST2cystatin SA [Source:HGNC Symbol;Acc:HGNC:2474]247630.000-0.5259No
98CST1cystatin SN [Source:HGNC Symbol;Acc:HGNC:2473]247640.000-0.5259No
99LINC00656long intergenic non-protein coding RNA 656 [Source:HGNC Symbol;Acc:HGNC:27304]252130.000-0.5380No
100LINC00652long intergenic non-protein coding RNA 652 [Source:HGNC Symbol;Acc:HGNC:25003]252150.000-0.5380No
101RNU1-23PRNA, U1 small nuclear 23, pseudogene [Source:HGNC Symbol;Acc:HGNC:41964]257850.000-0.5534No
102AL118508.1novel transcript258790.000-0.5560No
103CST9LP1cystatin 9-like pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39552]262110.000-0.5649No
104CST9LP2cystatin 9-like pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:44337]262120.000-0.5649No
105RNU6-1257PRNA, U6 small nuclear 1257, pseudogene [Source:HGNC Symbol;Acc:HGNC:48220]265010.000-0.5727No
106CFTRP1CFTR pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16182]272840.000-0.5939No
107CRNKL1crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]28253-0.090-0.6176No
108RPS15AP1ribosomal protein S15a pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16598]28824-0.157-0.6287No
109PET117PET117 cytochrome c oxidase chaperone [Source:HGNC Symbol;Acc:HGNC:40045]29212-0.205-0.6336No
110RPL12P12ribosomal protein L12 pseudogene 12 [Source:HGNC Symbol;Acc:HGNC:15951]29234-0.208-0.6285No
111RPL21P3ribosomal protein L21 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:16533]30014-0.307-0.6412Yes
112DZANK1double zinc ribbon and ankyrin repeat domains 1 [Source:HGNC Symbol;Acc:HGNC:15858]30273-0.340-0.6389Yes
113RPS19P1ribosomal protein S19 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16534]30331-0.345-0.6310Yes
114KAT14lysine acetyltransferase 14 [Source:HGNC Symbol;Acc:HGNC:15904]30624-0.385-0.6284Yes
115RPL24P2ribosomal protein L24 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:16597]30749-0.403-0.6207Yes
116GZF1GDNF inducible zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:15808]31108-0.455-0.6180Yes
117PTMAP3prothymosin alpha pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:9626]31411-0.507-0.6123Yes
118ACSS1acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]31684-0.556-0.6044Yes
119NINLninein like [Source:HGNC Symbol;Acc:HGNC:29163]31761-0.569-0.5909Yes
120MGME1mitochondrial genome maintenance exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:16205]32297-0.673-0.5870Yes
121RPL15P1ribosomal protein L15 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16583]32365-0.686-0.5701Yes
122RPL17P1ribosomal protein L17 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16559]32384-0.692-0.5517Yes
123NAPBNSF attachment protein beta [Source:HGNC Symbol;Acc:HGNC:15751]32708-0.760-0.5397Yes
124SNX5sorting nexin 5 [Source:HGNC Symbol;Acc:HGNC:14969]32881-0.805-0.5223Yes
125APMAPadipocyte plasma membrane associated protein [Source:HGNC Symbol;Acc:HGNC:13238]33176-0.878-0.5063Yes
126ENTPD6ectonucleoside triphosphate diphosphohydrolase 6 [Source:HGNC Symbol;Acc:HGNC:3368]33693-1.029-0.4921Yes
127RBBP9RB binding protein 9, serine hydrolase [Source:HGNC Symbol;Acc:HGNC:9892]33794-1.061-0.4658Yes
128NANPN-acetylneuraminic acid phosphatase [Source:HGNC Symbol;Acc:HGNC:16140]34469-1.300-0.4485Yes
129DTD1D-aminoacyl-tRNA deacylase 1 [Source:HGNC Symbol;Acc:HGNC:16219]34905-1.477-0.4199Yes
130CST7cystatin F [Source:HGNC Symbol;Acc:HGNC:2479]34936-1.483-0.3802Yes
131SLC24A3solute carrier family 24 member 3 [Source:HGNC Symbol;Acc:HGNC:10977]35755-1.940-0.3493Yes
132ABHD12abhydrolase domain containing 12, lysophospholipase [Source:HGNC Symbol;Acc:HGNC:15868]36267-2.372-0.2983Yes
133GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]36323-2.430-0.2334Yes
134KIZkizuna centrosomal protein [Source:HGNC Symbol;Acc:HGNC:15865]36640-2.834-0.1644Yes
135PYGBglycogen phosphorylase B [Source:HGNC Symbol;Acc:HGNC:9723]36781-3.131-0.0827Yes
136RIN2Ras and Rab interactor 2 [Source:HGNC Symbol;Acc:HGNC:18750]36850-3.3290.0065Yes
Table: GSEA details [plain text format]



Fig 2: CHR20P11   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR20P11: Random ES distribution   
Gene set null distribution of ES for CHR20P11