Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #KO_GAQ_versus_KO_NA.greenbergcls.cls #KO_GAQ_versus_KO_NA_repos |
| Phenotype | greenbergcls.cls#KO_GAQ_versus_KO_NA_repos |
| Upregulated in class | KO_GAQ |
| GeneSet | CHR2P12 |
| Enrichment Score (ES) | 0.5293213 |
| Normalized Enrichment Score (NES) | 1.1895912 |
| Nominal p-value | 0.1468254 |
| FDR q-value | 0.45890647 |
| FWER p-Value | 0.992 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | POLE4 | DNA polymerase epsilon 4, accessory subunit [Source:HGNC Symbol;Acc:HGNC:18755] | 471 | 2.103 | 0.2918 | Yes |
| 2 | HK2 | hexokinase 2 [Source:HGNC Symbol;Acc:HGNC:4923] | 1561 | 1.081 | 0.4189 | Yes |
| 3 | TACR1 | tachykinin receptor 1 [Source:HGNC Symbol;Acc:HGNC:11526] | 2657 | 0.675 | 0.4871 | Yes |
| 4 | CYCSP6 | CYCS pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:24421] | 3613 | 0.469 | 0.5293 | Yes |
| 5 | SUPT4H1P1 | SPT4 homolog, DSIF elongation factor subunit pseudogene [Source:HGNC Symbol;Acc:HGNC:33981] | 6067 | 0.085 | 0.4755 | No |
| 6 | GCFC2 | GC-rich sequence DNA-binding factor 2 [Source:HGNC Symbol;Acc:HGNC:1317] | 6538 | 0.022 | 0.4660 | No |
| 7 | LYARP1 | Ly1 antibody reactive pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:50747] | 7163 | 0.000 | 0.4491 | No |
| 8 | LINC01293 | long intergenic non-protein coding RNA 1293 [Source:HGNC Symbol;Acc:HGNC:50362] | 7438 | 0.000 | 0.4418 | No |
| 9 | LINC01291 | long intergenic non-protein coding RNA 1291 [Source:HGNC Symbol;Acc:HGNC:50358] | 7440 | 0.000 | 0.4417 | No |
| 10 | RNU6-827P | RNA, U6 small nuclear 827, pseudogene [Source:HGNC Symbol;Acc:HGNC:47790] | 9559 | 0.000 | 0.3846 | No |
| 11 | GAPDHP57 | glyceraldehyde 3 phosphate dehydrogenase pseudogene 57 [Source:HGNC Symbol;Acc:HGNC:38563] | 11129 | 0.000 | 0.3422 | No |
| 12 | AC007099.1 | novel transcript, antisense to EVA1A | 11702 | 0.000 | 0.3268 | No |
| 13 | MIR5000 | microRNA 5000 [Source:HGNC Symbol;Acc:HGNC:43464] | 11840 | 0.000 | 0.3231 | No |
| 14 | DHFRP3 | dihydrofolate reductase pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:52354] | 13564 | 0.000 | 0.2766 | No |
| 15 | MTND5P27 | MT-ND5 pseudogene 27 [Source:HGNC Symbol;Acc:HGNC:42289] | 14798 | 0.000 | 0.2433 | No |
| 16 | EVA1A | eva-1 homolog A, regulator of programmed cell death [Source:HGNC Symbol;Acc:HGNC:25816] | 15631 | 0.000 | 0.2208 | No |
| 17 | RNU6-685P | RNA, U6 small nuclear 685, pseudogene [Source:HGNC Symbol;Acc:HGNC:47648] | 16513 | 0.000 | 0.1971 | No |
| 18 | RN7SKP203 | RN7SK pseudogene 203 [Source:HGNC Symbol;Acc:HGNC:45927] | 18188 | 0.000 | 0.1519 | No |
| 19 | MTND4P25 | MT-ND4 pseudogene 25 [Source:HGNC Symbol;Acc:HGNC:42212] | 18742 | 0.000 | 0.1370 | No |
| 20 | LINC01851 | long intergenic non-protein coding RNA 1851 [Source:HGNC Symbol;Acc:HGNC:52667] | 19507 | 0.000 | 0.1163 | No |
| 21 | REG1CP | regenerating family member 1 gamma, pseudogene [Source:HGNC Symbol;Acc:HGNC:9953] | 19568 | 0.000 | 0.1147 | No |
| 22 | LINC01815 | long intergenic non-protein coding RNA 1815 [Source:HGNC Symbol;Acc:HGNC:52619] | 19573 | 0.000 | 0.1146 | No |
| 23 | RN7SKP164 | RN7SK pseudogene 164 [Source:HGNC Symbol;Acc:HGNC:45888] | 20352 | 0.000 | 0.0936 | No |
| 24 | MTND6P7 | MT-ND6 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:39470] | 24155 | 0.000 | -0.0090 | No |
| 25 | RNU6-561P | RNA, U6 small nuclear 561, pseudogene [Source:HGNC Symbol;Acc:HGNC:47524] | 24178 | 0.000 | -0.0096 | No |
| 26 | RN7SL201P | RNA, 7SL, cytoplasmic 201, pseudogene [Source:HGNC Symbol;Acc:HGNC:46217] | 24475 | 0.000 | -0.0176 | No |
| 27 | LRRTM4 | leucine rich repeat transmembrane neuronal 4 [Source:HGNC Symbol;Acc:HGNC:19411] | 25703 | 0.000 | -0.0507 | No |
| 28 | LRRTM1 | leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408] | 25704 | 0.000 | -0.0507 | No |
| 29 | MIR4264 | microRNA 4264 [Source:HGNC Symbol;Acc:HGNC:38338] | 26210 | 0.000 | -0.0643 | No |
| 30 | RNA5SP99 | RNA, 5S ribosomal pseudogene 99 [Source:HGNC Symbol;Acc:HGNC:42897] | 26359 | 0.000 | -0.0683 | No |
| 31 | RNA5SP98 | RNA, 5S ribosomal pseudogene 98 [Source:HGNC Symbol;Acc:HGNC:42896] | 26360 | 0.000 | -0.0683 | No |
| 32 | REG1B | regenerating family member 1 beta [Source:HGNC Symbol;Acc:HGNC:9952] | 26413 | 0.000 | -0.0697 | No |
| 33 | REG1A | regenerating family member 1 alpha [Source:HGNC Symbol;Acc:HGNC:9951] | 26414 | 0.000 | -0.0697 | No |
| 34 | REG3A | regenerating family member 3 alpha [Source:HGNC Symbol;Acc:HGNC:8601] | 26428 | 0.000 | -0.0701 | No |
| 35 | REG3G | regenerating family member 3 gamma [Source:HGNC Symbol;Acc:HGNC:29595] | 26432 | 0.000 | -0.0702 | No |
| 36 | RNU6-812P | RNA, U6 small nuclear 812, pseudogene [Source:HGNC Symbol;Acc:HGNC:47775] | 27443 | 0.000 | -0.0974 | No |
| 37 | MTCYBP7 | MT-CYB pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:51964] | 28679 | -0.140 | -0.1105 | No |
| 38 | SUCLA2P2 | SUCLA2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:38102] | 30643 | -0.388 | -0.1074 | No |
| 39 | CTNNA2 | catenin alpha 2 [Source:HGNC Symbol;Acc:HGNC:2510] | 31087 | -0.452 | -0.0538 | No |
| 40 | MRPL19 | mitochondrial ribosomal protein L19 [Source:HGNC Symbol;Acc:HGNC:14052] | 34949 | -1.490 | 0.0578 | No |
