Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_GAQ_versus_KO_NA.greenbergcls.cls
#KO_GAQ_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetCHR2Q11
Enrichment Score (ES)0.4808287
Normalized Enrichment Score (NES)1.2574542
Nominal p-value0.05185185
FDR q-value0.43121803
FWER p-Value0.945
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR2Q11   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1DUSP2dual specificity phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:3068]154.6820.0974Yes
2SEMA4Csemaphorin 4C [Source:HGNC Symbol;Acc:HGNC:10731]304.4170.1894Yes
3ARID5AAT-rich interaction domain 5A [Source:HGNC Symbol;Acc:HGNC:17361]1803.0270.2486Yes
4MITD1microtubule interacting and trafficking domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25207]4002.2720.2902Yes
5ITPRIPL1ITPRIP like 1 [Source:HGNC Symbol;Acc:HGNC:29371]4172.2400.3365Yes
6RNF149ring finger protein 149 [Source:HGNC Symbol;Acc:HGNC:23137]4222.2120.3827Yes
7TMEM127transmembrane protein 127 [Source:HGNC Symbol;Acc:HGNC:26038]8281.5680.4045Yes
8TXNDC9thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]13291.1870.4157Yes
9SNORD89small nucleolar RNA, C/D box 89 [Source:HGNC Symbol;Acc:HGNC:32750]21340.8460.4117Yes
10EIF5Beukaryotic translation initiation factor 5B [Source:HGNC Symbol;Acc:HGNC:30793]23170.7780.4230Yes
11CIAO1cytosolic iron-sulfur assembly component 1 [Source:HGNC Symbol;Acc:HGNC:14280]27800.6450.4240Yes
12TMEM131transmembrane protein 131 [Source:HGNC Symbol;Acc:HGNC:30366]29310.6040.4325Yes
13BBIP1P1BBSome interacting protein 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:52781]32340.5430.4357Yes
14ZNF2zinc finger protein 2 [Source:HGNC Symbol;Acc:HGNC:12991]36460.4640.4343Yes
15COA5cytochrome c oxidase assembly factor 5 [Source:HGNC Symbol;Acc:HGNC:33848]37440.4470.4410Yes
16YWHAQP5YWHAQ pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:37684]38130.4360.4483Yes
17SNX18P14sorting nexin 18 pseudogene 14 [Source:HGNC Symbol;Acc:HGNC:39622]39270.4110.4538Yes
18HMGN2P22high mobility group nucleosomal binding domain 2 pseudogene 22 [Source:HGNC Symbol;Acc:HGNC:39387]41340.3710.4560Yes
19CRACDLCRACD like [Source:HGNC Symbol;Acc:HGNC:33454]42560.3510.4601Yes
20AC097374.1pseudogene similar to part of asparagine synthetase (ASNS)43430.3390.4648Yes
21ACTR1Bactin related protein 1B [Source:HGNC Symbol;Acc:HGNC:168]45920.2990.4643Yes
22KANSL3KAT8 regulatory NSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25473]46270.2930.4695Yes
23CNOT11CCR4-NOT transcription complex subunit 11 [Source:HGNC Symbol;Acc:HGNC:25217]47520.2710.4719Yes
24CREG2cellular repressor of E1A stimulated genes 2 [Source:HGNC Symbol;Acc:HGNC:14272]47720.2690.4770Yes
25MGAT4Aalpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:HGNC Symbol;Acc:HGNC:7047]48300.2590.4808Yes
26FAHD2Bfumarylacetoacetate hydrolase domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25318]51860.2050.4755No
27ANKRD39ankyrin repeat domain 39 [Source:HGNC Symbol;Acc:HGNC:28640]52010.2030.4794No
28MRPS5mitochondrial ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:14498]53110.1870.4803No
29ATP5F1BP1ATP synthase F1 subunit beta pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:831]60300.0880.4627No
30LONRF2LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]74750.0000.4237No
31AC013270.1novel transcript75500.0000.4217No
32ANKRD36ankyrin repeat domain 36 [Source:HGNC Symbol;Acc:HGNC:24079]79810.0000.4100No
33ASTLastacin like metalloendopeptidase [Source:HGNC Symbol;Acc:HGNC:31704]81290.0000.4061No
34PROM2prominin 2 [Source:HGNC Symbol;Acc:HGNC:20685]85630.0000.3943No
35OR7E102Polfactory receptor family 7 subfamily E member 102 pseudogene [Source:HGNC Symbol;Acc:HGNC:15043]86350.0000.3924No
36TBC1D8-AS1TBC1D8 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:52782]90350.0000.3816No
37LINC01104long intergenic non-protein coding RNA 1104 [Source:HGNC Symbol;Acc:HGNC:49226]91670.0000.3781No
38IGKV3OR2-5immunoglobulin kappa variable 3/OR2-5 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5832]93650.0000.3728No
39FER1L5fer-1 like family member 5 [Source:HGNC Symbol;Acc:HGNC:19044]95840.0000.3669No
40LYG1lysozyme g1 [Source:HGNC Symbol;Acc:HGNC:27014]96550.0000.3650No
41LYG2lysozyme g2 [Source:HGNC Symbol;Acc:HGNC:29615]96560.0000.3650No
42TRIM43CPtripartite motif containing 43C, pseudogene [Source:HGNC Symbol;Acc:HGNC:43981]98310.0000.3603No
43IGKV1OR2-6immunoglobulin kappa variable 1/OR2-6 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5770]101810.0000.3508No
44IGKV1OR2-9immunoglobulin kappa variable 1/OR2-9 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5771]101850.0000.3507No
45IGKV1OR2-3immunoglobulin kappa variable 1/OR2-3 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5769]101920.0000.3506No
46FAM178Bfamily with sequence similarity 178 member B [Source:HGNC Symbol;Acc:HGNC:28036]107780.0000.3347No
47FABP7P2fatty acid binding protein 7 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:41952]111410.0000.3249No
48ANKRD20A8Pankyrin repeat domain 20 family member A8, pseudogene [Source:HGNC Symbol;Acc:HGNC:23666]112380.0000.3223No
49RNU4-84PRNA, U4 small nuclear 84, pseudogene [Source:HGNC Symbol;Acc:HGNC:47020]114070.0000.3178No
50RNU6-1320PRNA, U6 small nuclear 1320, pseudogene [Source:HGNC Symbol;Acc:HGNC:48283]117270.0000.3092No
51SLC2AXP1solute carrier family 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:31077]118180.0000.3067No
52AFF3AF4/FMR2 family member 3 [Source:HGNC Symbol;Acc:HGNC:6473]118430.0000.3061No
53LINC00342long intergenic non-protein coding RNA 342 [Source:HGNC Symbol;Acc:HGNC:42470]132010.0000.2694No
54MTCO1P48MT-CO1 pseudogene 48 [Source:HGNC Symbol;Acc:HGNC:52113]133140.0000.2663No
55MTCO3P45MT-CO3 pseudogene 45 [Source:HGNC Symbol;Acc:HGNC:52148]142640.0000.2407No
56RFX8RFX family member 8, lacking RFX DNA binding domain [Source:HGNC Symbol;Acc:HGNC:37253]145530.0000.2329No
57RNU7-46PRNA, U7 small nuclear 46 pseudogene [Source:HGNC Symbol;Acc:HGNC:34142]150200.0000.2203No
58TRIM43tripartite motif containing 43 [Source:HGNC Symbol;Acc:HGNC:19015]154730.0000.2080No
59MIR5696microRNA 5696 [Source:HGNC Symbol;Acc:HGNC:43516]155410.0000.2062No
60CNN2P8calponin 2 pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:39533]156100.0000.2044No
61RN7SL575PRNA, 7SL, cytoplasmic 575, pseudogene [Source:HGNC Symbol;Acc:HGNC:46591]158710.0000.1973No
62IL1R1interleukin 1 receptor type 1 [Source:HGNC Symbol;Acc:HGNC:5993]159920.0000.1941No
63IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]159930.0000.1941No
64ZAP70zeta chain of T cell receptor associated protein kinase 70 [Source:HGNC Symbol;Acc:HGNC:12858]161210.0000.1907No
65RN7SL313PRNA, 7SL, cytoplasmic 313, pseudogene [Source:HGNC Symbol;Acc:HGNC:46329]164030.0000.1831No
66ADRA2Badrenoceptor alpha 2B [Source:HGNC Symbol;Acc:HGNC:282]165970.0000.1778No
67AL845331.1putative aquaporin-7-like protein 3 [Source:NCBI gene (formerly Entrezgene);Acc:100509620]177330.0000.1471No
68ANKRD36Cankyrin repeat domain 36C [Source:HGNC Symbol;Acc:HGNC:32946]178620.0000.1437No
69ANKRD36Bankyrin repeat domain 36B [Source:HGNC Symbol;Acc:HGNC:29333]178680.0000.1435No
70STARD7-AS1STARD7 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40827]182550.0000.1331No
71IGKV1OR2-11immunoglobulin kappa variable 1/OR2-11 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5768]184100.0000.1289No
72IGKV2OR2-7Dimmunoglobulin kappa variable 2/OR2-7D (pseudogene) [Source:HGNC Symbol;Acc:HGNC:37489]185280.0000.1258No
73IGKV2OR2-10immunoglobulin kappa variable 2/OR2-10 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5806]185740.0000.1245No
74MALmal, T cell differentiation protein [Source:HGNC Symbol;Acc:HGNC:6817]188860.0000.1161No
75RNA5SP101RNA, 5S ribosomal pseudogene 101 [Source:HGNC Symbol;Acc:HGNC:42899]190000.0000.1131No
76NMSneuromedin S [Source:HGNC Symbol;Acc:HGNC:32203]193090.0000.1047No
77NANOGNBP1NANOGNB pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42158]193750.0000.1030No
78LINC01870long intergenic non-protein coding RNA 1870 [Source:HGNC Symbol;Acc:HGNC:52689]194830.0000.1001No
79LINC01868long intergenic non-protein coding RNA 1868 [Source:HGNC Symbol;Acc:HGNC:52688]194900.0000.0999No
80LINC01849long intergenic non-protein coding RNA 1849 [Source:HGNC Symbol;Acc:HGNC:52665]195900.0000.0972No
81TEKT4tektin 4 [Source:HGNC Symbol;Acc:HGNC:31012]197790.0000.0922No
82GPAT2P2glycerol-3-phosphate acyltransferase 2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:52331]199690.0000.0870No
83GPAT2P1glycerol-3-phosphate acyltransferase 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:52330]199730.0000.0870No
84RNU7-96PRNA, U7 small nuclear 96 pseudogene [Source:HGNC Symbol;Acc:HGNC:45630]208100.0000.0643No
85MIR3127microRNA 3127 [Source:HGNC Symbol;Acc:HGNC:38269]210760.0000.0572No
86RNU4-8PRNA, U4 small nuclear 8, pseudogene [Source:HGNC Symbol;Acc:HGNC:10195]212900.0000.0514No
87VWA3Bvon Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]213840.0000.0489No
88C2orf92chromosome 2 open reading frame 92 [Source:HGNC Symbol;Acc:HGNC:49272]214360.0000.0475No
89C2orf15chromosome 2 open reading frame 15 [Source:HGNC Symbol;Acc:HGNC:28436]215620.0000.0441No
90TRIM64FPtripartite motif containing 64F, pseudogene [Source:HGNC Symbol;Acc:HGNC:43976]216770.0000.0410No
91ZNF514zinc finger protein 514 [Source:HGNC Symbol;Acc:HGNC:25894]218800.0000.0356No
92CYP4F32Pcytochrome P450 family 4 subfamily F member 32, pseudogene [Source:HGNC Symbol;Acc:HGNC:39951]228220.0000.0101No
93KCNIP3potassium voltage-gated channel interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:15523]239190.000-0.0195No
94UBTFL3UBTF like 3 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:35402]240100.000-0.0220No
95UBTFL6UBTF like 6 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:35406]240130.000-0.0220No
96UBTFL5UBTF like 5 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:35405]240140.000-0.0220No
97RN7SL210PRNA, 7SL, cytoplasmic 210, pseudogene [Source:HGNC Symbol;Acc:HGNC:46226]240710.000-0.0235No
98HMGN1P36high mobility group nucleosome binding domain 1 pseudogene 36 [Source:HGNC Symbol;Acc:HGNC:39380]250350.000-0.0496No
99TRIM43Btripartite motif containing 43B [Source:HGNC Symbol;Acc:HGNC:37146]250540.000-0.0501No
100GPAT2glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:27168]254290.000-0.0602No
101TRIM51JPtripartite motif-containing 51J, pseudogene [Source:HGNC Symbol;Acc:HGNC:43978]260710.000-0.0775No
102CNN2P11calponin 2 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:39536]269060.000-0.1001No
103IGKV2OR2-2immunoglobulin kappa variable 2/OR2-2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5808]269710.000-0.1018No
104IGKV2OR2-1immunoglobulin kappa variable 2/OR2-1 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5805]269730.000-0.1019No
105IGKV2OR2-8immunoglobulin kappa variable 2/OR2-8 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5811]269850.000-0.1022No
106IGKV2OR2-7immunoglobulin kappa variable 2/OR2-7 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5810]269860.000-0.1022No
107MRPL30mitochondrial ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:14036]27774-0.037-0.1227No
108TSGA10testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]28227-0.088-0.1331No
109CHST10carbohydrate sulfotransferase 10 [Source:HGNC Symbol;Acc:HGNC:19650]28516-0.122-0.1383No
110CNGA3cyclic nucleotide gated channel subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:2150]28678-0.140-0.1398No
111CNNM4cyclin and CBS domain divalent metal cation transport mediator 4 [Source:HGNC Symbol;Acc:HGNC:105]28943-0.171-0.1433No
112PDCL3phosducin like 3 [Source:HGNC Symbol;Acc:HGNC:28860]29130-0.196-0.1443No
113UNC50unc-50 inner nuclear membrane RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16046]29326-0.220-0.1449No
114NPAS2neuronal PAS domain protein 2 [Source:HGNC Symbol;Acc:HGNC:7895]29919-0.298-0.1547No
115COX5Bcytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]29931-0.299-0.1488No
116NEURL3neuralized E3 ubiquitin protein ligase 3 [Source:HGNC Symbol;Acc:HGNC:25162]30127-0.321-0.1474No
117RPS24P6ribosomal protein S24 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:36240]30181-0.328-0.1419No
118RPL31ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]30573-0.377-0.1446No
119MAP4K4mitogen-activated protein kinase kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6866]30832-0.416-0.1429No
120LMAN2Llectin, mannose binding 2 like [Source:HGNC Symbol;Acc:HGNC:19263]31425-0.509-0.1483No
121SNRNP200small nuclear ribonucleoprotein U5 subunit 200 [Source:HGNC Symbol;Acc:HGNC:30859]31579-0.536-0.1412No
122ANKRD23ankyrin repeat domain 23 [Source:HGNC Symbol;Acc:HGNC:24470]31952-0.599-0.1388No
123STARD7StAR related lipid transfer domain containing 7 [Source:HGNC Symbol;Acc:HGNC:18063]32793-0.780-0.1452No
124FAHD2Afumarylacetoacetate hydrolase domain containing 2A [Source:HGNC Symbol;Acc:HGNC:24252]33024-0.839-0.1339No
125REV1REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060]33647-1.015-0.1295No
126LIPT1lipoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:29569]34607-1.359-0.1271No
127INPP4Ainositol polyphosphate-4-phosphatase type I A [Source:HGNC Symbol;Acc:HGNC:6074]34672-1.379-0.1000No
128TBC1D8TBC1 domain family member 8 [Source:HGNC Symbol;Acc:HGNC:17791]35381-1.712-0.0833No
129FAHD2CPfumarylacetoacetate hydrolase domain containing 2C, pseudogene [Source:HGNC Symbol;Acc:HGNC:44135]35627-1.853-0.0513No
130CNNM3cyclin and CBS domain divalent metal cation transport mediator 3 [Source:HGNC Symbol;Acc:HGNC:104]35880-2.026-0.0157No
131NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36203-2.3180.0240No
Table: GSEA details [plain text format]



Fig 2: CHR2Q11   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR2Q11: Random ES distribution   
Gene set null distribution of ES for CHR2Q11