Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_GAQ_versus_KO_NA.greenbergcls.cls
#KO_GAQ_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetCHR2Q14
Enrichment Score (ES)0.47363412
Normalized Enrichment Score (NES)1.2665619
Nominal p-value0.017094018
FDR q-value0.4473744
FWER p-Value0.933
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR2Q14   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1Binterleukin 1 beta [Source:HGNC Symbol;Acc:HGNC:5992]04.9900.0889Yes
2IL1RNinterleukin 1 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:6000]24.9340.1769Yes
3IL1Ainterleukin 1 alpha [Source:HGNC Symbol;Acc:HGNC:5991]574.0350.2473Yes
4TMEM185Btransmembrane protein 185B [Source:HGNC Symbol;Acc:HGNC:18896]5222.0100.2706Yes
5SLC20A1solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]5302.0030.3061Yes
6YWHAZP2tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:31078]7741.6170.3284Yes
7POLR1BRNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]7811.6130.3569Yes
8ACTR3actin related protein 3 [Source:HGNC Symbol;Acc:HGNC:170]8511.5480.3827Yes
9ZC3H8zinc finger CCCH-type containing 8 [Source:HGNC Symbol;Acc:HGNC:30941]11031.3270.3995Yes
10AMMECR1LAMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]12981.2020.4157Yes
11DDX18DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]13671.1710.4347Yes
12TFCP2L1transcription factor CP2 like 1 [Source:HGNC Symbol;Acc:HGNC:17925]15171.1030.4504Yes
13LIMS2LIM zinc finger domain containing 2 [Source:HGNC Symbol;Acc:HGNC:16084]18140.9560.4594Yes
14MAP3K2mitogen-activated protein kinase kinase kinase 2 [Source:HGNC Symbol;Acc:HGNC:6854]23070.7800.4600Yes
15C2orf76chromosome 2 open reading frame 76 [Source:HGNC Symbol;Acc:HGNC:27017]29930.5890.4520Yes
16PSD4pleckstrin and Sec7 domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19096]32270.5460.4554Yes
17TSNtranslin [Source:HGNC Symbol;Acc:HGNC:12379]36590.4620.4519Yes
18XIAPP3X-linked inhibitor of apoptosis pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:52377]37310.4500.4580Yes
19POLR2DRNA polymerase II subunit D [Source:HGNC Symbol;Acc:HGNC:9191]39050.4160.4608Yes
20MYO7Bmyosin VIIB [Source:HGNC Symbol;Acc:HGNC:7607]39130.4150.4680Yes
21CCDC93coiled-coil domain containing 93 [Source:HGNC Symbol;Acc:HGNC:25611]39700.4020.4736Yes
22NIFKnucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]43510.3370.4694No
23CNTNAP5contactin associated protein family member 5 [Source:HGNC Symbol;Acc:HGNC:18748]45490.3040.4694No
24IWS1interacts with SUPT6H, CTD assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:25467]48440.2560.4661No
25WDR33WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]50210.2290.4654No
26IL36Ainterleukin 36 alpha [Source:HGNC Symbol;Acc:HGNC:15562]51380.2120.4660No
27SLC35F5solute carrier family 35 member F5 [Source:HGNC Symbol;Acc:HGNC:23617]51810.2060.4686No
28NPM1P32nucleophosmin 1 pseudogene 32 [Source:HGNC Symbol;Acc:HGNC:45211]54010.1730.4657No
29ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit [Source:HGNC Symbol;Acc:HGNC:3435]54790.1620.4665No
30CDK8P2cyclin dependent kinase 8 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:52296]59490.1010.4556No
31ISCA1P6iron-sulfur cluster assembly 1 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:38027]60620.0850.4541No
32SEPHS1P7selenophosphate synthetase 1 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:42167]63730.0450.4465No
33PTPN4protein tyrosine phosphatase non-receptor type 4 [Source:HGNC Symbol;Acc:HGNC:9656]65800.0180.4413No
34HTR5BP5-hydroxytryptamine receptor 5B, pseudogene [Source:HGNC Symbol;Acc:HGNC:16291]74670.0000.4173No
35CYP27C1cytochrome P450 family 27 subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:33480]81400.0000.3991No
36FOXD4L1forkhead box D4 like 1 [Source:HGNC Symbol;Acc:HGNC:18521]86410.0000.3856No
37RNU6-395PRNA, U6 small nuclear 395, pseudogene [Source:HGNC Symbol;Acc:HGNC:47358]86550.0000.3852No
38RNU2-41PRNA, U2 small nuclear 41, pseudogene [Source:HGNC Symbol;Acc:HGNC:48534]87160.0000.3836No
39LINC01191long intergenic non-protein coding RNA 1191 [Source:HGNC Symbol;Acc:HGNC:49595]89140.0000.3783No
40LINC01101long intergenic non-protein coding RNA 1101 [Source:HGNC Symbol;Acc:HGNC:25923]91690.0000.3714No
41MARCOmacrophage receptor with collagenous structure [Source:HGNC Symbol;Acc:HGNC:6895]92780.0000.3685No
42DPP10-AS1DPP10 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40941]94650.0000.3635No
43DPP10-AS3DPP10 antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40939]94690.0000.3634No
44DPP10-AS2DPP10 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:40940]94700.0000.3634No
45PGM5P4-AS1PGM5P4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51195]96070.0000.3597No
46MTND1P28MT-ND1 pseudogene 28 [Source:HGNC Symbol;Acc:HGNC:42077]103380.0000.3399No
47CFAP221cilia and flagella associated protein 221 [Source:HGNC Symbol;Acc:HGNC:33720]105530.0000.3342No
48PGM5P4phosphoglucomutase 5 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:49605]107670.0000.3284No
49IL1F10interleukin 1 family member 10 [Source:HGNC Symbol;Acc:HGNC:15552]112130.0000.3164No
50AC079154.1novel transcript114920.0000.3088No
51IGKV1OR2-108immunoglobulin kappa variable 1/OR2-108 (non-functional) [Source:HGNC Symbol;Acc:HGNC:5767]115020.0000.3086No
52RNU6-744PRNA, U6 small nuclear 744, pseudogene [Source:HGNC Symbol;Acc:HGNC:47707]115540.0000.3072No
53PROCprotein C, inactivator of coagulation factors Va and VIIIa [Source:HGNC Symbol;Acc:HGNC:9451]118310.0000.2997No
54RNU7-190PRNA, U7 small nuclear 190 pseudogene [Source:HGNC Symbol;Acc:HGNC:45724]123690.0000.2852No
55RNU7-182PRNA, U7 small nuclear 182 pseudogene [Source:HGNC Symbol;Acc:HGNC:45716]125610.0000.2800No
56IL36RNinterleukin 36 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:15561]127390.0000.2753No
57RNU6-1180PRNA, U6 small nuclear 1180, pseudogene [Source:HGNC Symbol;Acc:HGNC:48143]128150.0000.2732No
58MTCO1P43MT-CO1 pseudogene 43 [Source:HGNC Symbol;Acc:HGNC:52108]133120.0000.2598No
59RNU6-259PRNA, U6 small nuclear 259, pseudogene [Source:HGNC Symbol;Acc:HGNC:47222]138400.0000.2455No
60IL37interleukin 37 [Source:HGNC Symbol;Acc:HGNC:15563]140120.0000.2409No
61MTCO3P43MT-CO3 pseudogene 43 [Source:HGNC Symbol;Acc:HGNC:52146]142570.0000.2343No
62MTND5P28MT-ND5 pseudogene 28 [Source:HGNC Symbol;Acc:HGNC:42290]147970.0000.2197No
63MTND5P22MT-ND5 pseudogene 22 [Source:HGNC Symbol;Acc:HGNC:42284]148050.0000.2195No
64PAX8paired box 8 [Source:HGNC Symbol;Acc:HGNC:8622]149910.0000.2145No
65RNY4P7RNY4 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:34056]151680.0000.2098No
66NT5DC45'-nucleotidase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:27678]153230.0000.2056No
67TEX51testis expressed 51 [Source:HGNC Symbol;Acc:HGNC:52387]153470.0000.2050No
68PAX8-AS1PAX8 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49271]154180.0000.2031No
69MIR1302-3microRNA 1302-3 [Source:HGNC Symbol;Acc:HGNC:35295]154890.0000.2012No
70IL36Binterleukin 36 beta [Source:HGNC Symbol;Acc:HGNC:15564]157470.0000.1942No
71IL36Ginterleukin 36 gamma [Source:HGNC Symbol;Acc:HGNC:15741]157770.0000.1935No
72HMGN2P23high mobility group nucleosomal binding domain 2 pseudogene 23 [Source:HGNC Symbol;Acc:HGNC:39388]159730.0000.1882No
73RGPD8RANBP2 like and GRIP domain containing 8 [Source:HGNC Symbol;Acc:HGNC:9849]160500.0000.1861No
74RNU6-675PRNA, U6 small nuclear 675, pseudogene [Source:HGNC Symbol;Acc:HGNC:47638]162710.0000.1802No
75EN1engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]164950.0000.1741No
76MTCYBP39MT-CYB pseudogene 39 [Source:HGNC Symbol;Acc:HGNC:52307]168100.0000.1656No
77NIFK-AS1NIFK antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27385]172430.0000.1539No
78RNU4ATACRNA, U4atac small nuclear (U12-dependent splicing) [Source:HGNC Symbol;Acc:HGNC:34016]174670.0000.1479No
79GPR17G protein-coupled receptor 17 [Source:HGNC Symbol;Acc:HGNC:4471]175170.0000.1466No
80NIFKP9nucleolar protein interacting with the FHA domain of MKI67 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:44957]181120.0000.1305No
81MTND4P26MT-ND4 pseudogene 26 [Source:HGNC Symbol;Acc:HGNC:42213]187410.0000.1135No
82RNA5SP103RNA, 5S ribosomal pseudogene 103 [Source:HGNC Symbol;Acc:HGNC:42901]189980.0000.1066No
83RNA5SP102RNA, 5S ribosomal pseudogene 102 [Source:HGNC Symbol;Acc:HGNC:42900]189990.0000.1066No
84LINC01889long intergenic non-protein coding RNA 1889 [Source:HGNC Symbol;Acc:HGNC:52708]195230.0000.0924No
85LINC01826long intergenic non-protein coding RNA 1826 [Source:HGNC Symbol;Acc:HGNC:52632]195560.0000.0916No
86LINC01823long intergenic non-protein coding RNA 1823 [Source:HGNC Symbol;Acc:HGNC:52628]195640.0000.0914No
87INHBBinhibin subunit beta B [Source:HGNC Symbol;Acc:HGNC:6067]203200.0000.0710No
88RN7SL111PRNA, 7SL, cytoplasmic 111, pseudogene [Source:HGNC Symbol;Acc:HGNC:46127]204550.0000.0673No
89LINC01941long intergenic non-protein coding RNA 1941 [Source:HGNC Symbol;Acc:HGNC:52764]204700.0000.0670No
90RN7SKP102RN7SK pseudogene 102 [Source:HGNC Symbol;Acc:HGNC:45826]205080.0000.0660No
91LINC01961long intergenic non-protein coding RNA 1961 [Source:HGNC Symbol;Acc:HGNC:52786]205230.0000.0656No
92LINC01956long intergenic non-protein coding RNA 1956 [Source:HGNC Symbol;Acc:HGNC:52777]205410.0000.0651No
93MTND2P21MT-ND2 pseudogene 21 [Source:HGNC Symbol;Acc:HGNC:42122]206980.0000.0609No
94GLI2GLI family zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:4318]217730.0000.0318No
95CBWD2COBW domain containing 2 [Source:HGNC Symbol;Acc:HGNC:17907]225710.0000.0103No
96RNU6-1147PRNA, U6 small nuclear 1147, pseudogene [Source:HGNC Symbol;Acc:HGNC:48110]225860.0000.0099No
97MTND4LP14MT-ND4L pseudogene 14 [Source:HGNC Symbol;Acc:HGNC:42248]231010.000-0.0040No
98C1QL2complement C1q like 2 [Source:HGNC Symbol;Acc:HGNC:24181]232870.000-0.0090No
99RNU4-48PRNA, U4 small nuclear 48, pseudogene [Source:HGNC Symbol;Acc:HGNC:46984]234120.000-0.0124No
100MTND3P10MT-ND3 pseudogene 10 [Source:HGNC Symbol;Acc:HGNC:42150]243710.000-0.0383No
101RN7SL468PRNA, 7SL, cytoplasmic 468, pseudogene [Source:HGNC Symbol;Acc:HGNC:46484]244490.000-0.0404No
102FAM138Bfamily with sequence similarity 138 member B [Source:HGNC Symbol;Acc:HGNC:33582]249420.000-0.0537No
103MTATP6P26MT-ATP6 pseudogene 26 [Source:HGNC Symbol;Acc:HGNC:52182]253480.000-0.0647No
104DDX11L2DEAD/H-box helicase 11 like 2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:37103]254820.000-0.0683No
105RABL2ARAB, member of RAS oncogene family like 2A [Source:HGNC Symbol;Acc:HGNC:9799]264400.000-0.0942No
106MIR4783microRNA 4783 [Source:HGNC Symbol;Acc:HGNC:41874]272890.000-0.1171No
107MIR4782microRNA 4782 [Source:HGNC Symbol;Acc:HGNC:41635]272950.000-0.1172No
108NDUFB4P6NADH:ubiquinone oxidoreductase subunit B4 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:45254]28055-0.067-0.1366No
109STEAP3-AS1STEAP3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41053]28122-0.075-0.1370No
110DBIdiazepam binding inhibitor, acyl-CoA binding protein [Source:HGNC Symbol;Acc:HGNC:2690]28228-0.088-0.1383No
111RALBRAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]28348-0.102-0.1397No
112SFT2D3SFT2 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28767]28490-0.117-0.1414No
113TTLtubulin tyrosine ligase [Source:HGNC Symbol;Acc:HGNC:21586]28787-0.153-0.1467No
114RPL12P15ribosomal protein L12 pseudogene 15 [Source:HGNC Symbol;Acc:HGNC:36619]28950-0.172-0.1480No
115SCTRsecretin receptor [Source:HGNC Symbol;Acc:HGNC:10608]29131-0.196-0.1494No
116TMEM37transmembrane protein 37 [Source:HGNC Symbol;Acc:HGNC:18216]29526-0.243-0.1557No
117RPL23AP7ribosomal protein L23a pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:17336]30483-0.365-0.1751No
118HS6ST1heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]30631-0.386-0.1722No
119RPSAP23ribosomal protein SA pseudogene 23 [Source:HGNC Symbol;Acc:HGNC:36742]31320-0.488-0.1821No
120WASH2PWASP family homolog 2, pseudogene [Source:HGNC Symbol;Acc:HGNC:33145]31428-0.509-0.1759No
121SAP130Sin3A associated protein 130 [Source:HGNC Symbol;Acc:HGNC:29813]31558-0.533-0.1699No
122GYPCglycophorin C (Gerbich blood group) [Source:HGNC Symbol;Acc:HGNC:4704]31742-0.566-0.1648No
123TMEM177transmembrane protein 177 [Source:HGNC Symbol;Acc:HGNC:28143]32298-0.673-0.1678No
124UGGT1UDP-glucose glycoprotein glucosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15663]32347-0.681-0.1570No
125DPP10dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]32702-0.759-0.1530No
126DYNLT3P2dynein light chain Tctex-type 3 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:37081]32734-0.765-0.1402No
127CLASP1cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]32846-0.796-0.1290No
128CKAP2Lcytoskeleton associated protein 2 like [Source:HGNC Symbol;Acc:HGNC:26877]34594-1.353-0.1522No
129ZC3H6zinc finger CCCH-type containing 6 [Source:HGNC Symbol;Acc:HGNC:24762]34877-1.465-0.1337No
130INSIG2insulin induced gene 2 [Source:HGNC Symbol;Acc:HGNC:20452]34970-1.501-0.1094No
131CHCHD5coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]35181-1.603-0.0866No
132BIN1bridging integrator 1 [Source:HGNC Symbol;Acc:HGNC:1052]35207-1.619-0.0584No
133EPB41L5erythrocyte membrane protein band 4.1 like 5 [Source:HGNC Symbol;Acc:HGNC:19819]36121-2.244-0.0431No
134STEAP3STEAP3 metalloreductase [Source:HGNC Symbol;Acc:HGNC:24592]37001-3.8880.0024No
Table: GSEA details [plain text format]



Fig 2: CHR2Q14   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR2Q14: Random ES distribution   
Gene set null distribution of ES for CHR2Q14