Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #KO_GAQ_versus_KO_NA.greenbergcls.cls #KO_GAQ_versus_KO_NA_repos |
| Phenotype | greenbergcls.cls#KO_GAQ_versus_KO_NA_repos |
| Upregulated in class | KO_NA |
| GeneSet | CHR3P12 |
| Enrichment Score (ES) | -0.6361193 |
| Normalized Enrichment Score (NES) | -1.2776107 |
| Nominal p-value | 0.07625 |
| FDR q-value | 0.67812777 |
| FWER p-Value | 1.0 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | OSBPL9P1 | oxysterol binding protein like 9 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:48731] | 1968 | 0.903 | 0.0144 | No |
| 2 | NIPA2P2 | NIPA2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:42042] | 2654 | 0.676 | 0.0464 | No |
| 3 | THAP12P2 | THAP domain containing 12 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39566] | 4189 | 0.363 | 0.0321 | No |
| 4 | CYP51A1P1 | cytochrome P450 family 51 subfamily A member 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:20245] | 4647 | 0.289 | 0.0414 | No |
| 5 | CADM2 | cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:29849] | 5367 | 0.177 | 0.0352 | No |
| 6 | FAM86DP | family with sequence similarity 86 member D, pseudogene [Source:HGNC Symbol;Acc:HGNC:32659] | 5804 | 0.116 | 0.0322 | No |
| 7 | FRG2C | FSHD region gene 2 family member C [Source:HGNC Symbol;Acc:HGNC:33626] | 6987 | 0.000 | 0.0002 | No |
| 8 | RNU2-28P | RNA, U2 small nuclear 28, pseudogene [Source:HGNC Symbol;Acc:HGNC:48521] | 8340 | 0.000 | -0.0363 | No |
| 9 | RNU6-386P | RNA, U6 small nuclear 386, pseudogene [Source:HGNC Symbol;Acc:HGNC:47349] | 8392 | 0.000 | -0.0376 | No |
| 10 | RN7SL294P | RNA, 7SL, cytoplasmic 294, pseudogene [Source:HGNC Symbol;Acc:HGNC:46310] | 8399 | 0.000 | -0.0378 | No |
| 11 | CLUHP10 | clustered mitochondria homolog pseudogene 10 [Source:HGNC Symbol;Acc:HGNC:51574] | 8475 | 0.000 | -0.0398 | No |
| 12 | AGGF1P3 | angiogenic factor with G-patch and FHA domains 1 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:38053] | 8514 | 0.000 | -0.0409 | No |
| 13 | OR7E121P | olfactory receptor family 7 subfamily E member 121 pseudogene [Source:HGNC Symbol;Acc:HGNC:15049] | 8943 | 0.000 | -0.0524 | No |
| 14 | MYLKP1 | myosin light chain kinase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:7591] | 10741 | 0.000 | -0.1010 | No |
| 15 | LSP1P2 | LSP1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39717] | 10803 | 0.000 | -0.1026 | No |
| 16 | RN7SL647P | RNA, 7SL, cytoplasmic 647, pseudogene [Source:HGNC Symbol;Acc:HGNC:46663] | 11228 | 0.000 | -0.1140 | No |
| 17 | CADM2-AS1 | CADM2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41248] | 12271 | 0.000 | -0.1422 | No |
| 18 | CADM2-AS2 | CADM2 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:41247] | 12272 | 0.000 | -0.1422 | No |
| 19 | LINC00971 | long intergenic non-protein coding RNA 971 [Source:HGNC Symbol;Acc:HGNC:48737] | 12282 | 0.000 | -0.1424 | No |
| 20 | LINC00960 | long intergenic non-protein coding RNA 960 [Source:HGNC Symbol;Acc:HGNC:48710] | 12295 | 0.000 | -0.1428 | No |
| 21 | MIR1324 | microRNA 1324 [Source:HGNC Symbol;Acc:HGNC:35377] | 12590 | 0.000 | -0.1507 | No |
| 22 | ENPP7P2 | ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:48685] | 13420 | 0.000 | -0.1731 | No |
| 23 | MRPS17P3 | mitochondrial ribosomal protein S17 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:29736] | 14214 | 0.000 | -0.1945 | No |
| 24 | SRRM1P2 | serine/arginine repetitive matrix 1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:38163] | 14254 | 0.000 | -0.1956 | No |
| 25 | VGLL3 | vestigial like family member 3 [Source:HGNC Symbol;Acc:HGNC:24327] | 14434 | 0.000 | -0.2004 | No |
| 26 | MIR5688 | microRNA 5688 [Source:HGNC Symbol;Acc:HGNC:43463] | 15556 | 0.000 | -0.2307 | No |
| 27 | RN7SKP284 | RN7SK pseudogene 284 [Source:HGNC Symbol;Acc:HGNC:46008] | 18029 | 0.000 | -0.2974 | No |
| 28 | RNU6-217P | RNA, U6 small nuclear 217, pseudogene [Source:HGNC Symbol;Acc:HGNC:47180] | 18054 | 0.000 | -0.2981 | No |
| 29 | DUX4L26 | double homeobox 4 like 26 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:50807] | 18615 | 0.000 | -0.3132 | No |
| 30 | RN7SKP61 | RN7SK pseudogene 61 [Source:HGNC Symbol;Acc:HGNC:45785] | 18746 | 0.000 | -0.3167 | No |
| 31 | OR7E22P | olfactory receptor family 7 subfamily E member 22 pseudogene [Source:HGNC Symbol;Acc:HGNC:8394] | 20278 | 0.000 | -0.3580 | No |
| 32 | MIR3923 | microRNA 3923 [Source:HGNC Symbol;Acc:HGNC:38978] | 20818 | 0.000 | -0.3726 | No |
| 33 | LINC02027 | long intergenic non-protein coding RNA 2027 [Source:HGNC Symbol;Acc:HGNC:52862] | 21502 | 0.000 | -0.3910 | No |
| 34 | LINC02050 | long intergenic non-protein coding RNA 2050 [Source:HGNC Symbol;Acc:HGNC:52890] | 21536 | 0.000 | -0.3919 | No |
| 35 | LINC02025 | long intergenic non-protein coding RNA 2025 [Source:HGNC Symbol;Acc:HGNC:52860] | 21565 | 0.000 | -0.3927 | No |
| 36 | LINC02018 | long intergenic non-protein coding RNA 2018 [Source:HGNC Symbol;Acc:HGNC:52853] | 21581 | 0.000 | -0.3931 | No |
| 37 | LINC02008 | long intergenic non-protein coding RNA 2008 [Source:HGNC Symbol;Acc:HGNC:52844] | 21596 | 0.000 | -0.3935 | No |
| 38 | LINC02077 | long intergenic non-protein coding RNA 2077 [Source:HGNC Symbol;Acc:HGNC:52925] | 21676 | 0.000 | -0.3956 | No |
| 39 | LINC02070 | long intergenic non-protein coding RNA 2070 [Source:HGNC Symbol;Acc:HGNC:52916] | 21683 | 0.000 | -0.3958 | No |
| 40 | RNU6-1129P | RNA, U6 small nuclear 1129, pseudogene [Source:HGNC Symbol;Acc:HGNC:48092] | 22299 | 0.000 | -0.4124 | No |
| 41 | ROBO2 | roundabout guidance receptor 2 [Source:HGNC Symbol;Acc:HGNC:10250] | 22671 | 0.000 | -0.4224 | No |
| 42 | ROBO1 | roundabout guidance receptor 1 [Source:HGNC Symbol;Acc:HGNC:10249] | 22678 | 0.000 | -0.4226 | No |
| 43 | RARRES2P1 | retinoic acid receptor responder 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:48700] | 22879 | 0.000 | -0.4280 | No |
| 44 | RPL7AP23 | ribosomal protein L7a pseudogene 23 [Source:HGNC Symbol;Acc:HGNC:36884] | 23823 | 0.000 | -0.4534 | No |
| 45 | LINC00506 | long intergenic non-protein coding RNA 506 [Source:NCBI gene (formerly Entrezgene);Acc:100846978] | 24162 | 0.000 | -0.4626 | No |
| 46 | CNTN3 | contactin 3 [Source:HGNC Symbol;Acc:HGNC:2173] | 25310 | 0.000 | -0.4935 | No |
| 47 | RPL23AP49 | ribosomal protein L23a pseudogene 49 [Source:HGNC Symbol;Acc:HGNC:35689] | 25823 | 0.000 | -0.5074 | No |
| 48 | RN7SL751P | RNA, 7SL, cytoplasmic 751, pseudogene [Source:HGNC Symbol;Acc:HGNC:46767] | 25971 | 0.000 | -0.5113 | No |
| 49 | MIR4273 | microRNA 4273 [Source:HGNC Symbol;Acc:HGNC:38339] | 26335 | 0.000 | -0.5211 | No |
| 50 | ZNF717 | zinc finger protein 717 [Source:HGNC Symbol;Acc:HGNC:29448] | 27602 | -0.015 | -0.5542 | No |
| 51 | ALG1L6P | ALG1 like 6, pseudogene [Source:HGNC Symbol;Acc:HGNC:44375] | 27623 | -0.017 | -0.5535 | No |
| 52 | PPATP1 | phosphoribosyl pyrophosphate amidotransferase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:9239] | 27951 | -0.057 | -0.5581 | No |
| 53 | SETP6 | SET pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:42925] | 28086 | -0.071 | -0.5564 | No |
| 54 | UNC93B3 | unc-93 homolog B3 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:13483] | 29060 | -0.189 | -0.5685 | No |
| 55 | SNRPCP10 | small nuclear ribonucleoprotein polypeptide C pseudogene 10 [Source:HGNC Symbol;Acc:HGNC:49825] | 31564 | -0.533 | -0.5963 | Yes |
| 56 | HNRNPA3P6 | heterogeneous nuclear ribonucleoprotein A3 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:48495] | 32585 | -0.731 | -0.5692 | Yes |
| 57 | HMGB1P38 | high mobility group box 1 pseudogene 38 [Source:HGNC Symbol;Acc:HGNC:39185] | 32676 | -0.752 | -0.5153 | Yes |
| 58 | RPS3AP15 | RPS3A pseudogene 15 [Source:HGNC Symbol;Acc:HGNC:35781] | 32765 | -0.773 | -0.4599 | Yes |
| 59 | HNRNPA3P8 | heterogeneous nuclear ribonucleoprotein A3 pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:48497] | 32824 | -0.789 | -0.4025 | Yes |
| 60 | AKR1B1P2 | aldo-keto reductase family 1 member B1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:425] | 35096 | -1.563 | -0.3470 | Yes |
| 61 | VDAC1P7 | voltage dependent anion channel 1 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:37482] | 35928 | -2.074 | -0.2143 | Yes |
| 62 | GBE1 | 1,4-alpha-glucan branching enzyme 1 [Source:HGNC Symbol;Acc:HGNC:4180] | 36836 | -3.286 | 0.0069 | Yes |
