Details for gene set CHR4Q35[GSEA]

Table: GSEA Results Summary

Dataset	greenberg_collapsed_to_symbols.greenbergcls.cls #KO_GAQ_versus_KO_NA.greenbergcls.cls #KO_GAQ_versus_KO_NA_repos
Phenotype	greenbergcls.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in class	KO_NA
GeneSet	CHR4Q35
Enrichment Score (ES)	-0.66152394
Normalized Enrichment Score (NES)	-1.4120383
Nominal p-value	0.004651163
FDR q-value	0.29999897
FWER p-Value	0.864

Table: GSEA details [plain text format]
	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TLR3	toll like receptor 3 [Source:HGNC Symbol;Acc:HGNC:11849]	796	1.601	0.0254	No
2	HSP90AA4P	heat shock protein 90 alpha family class A member 4, pseudogene [Source:HGNC Symbol;Acc:HGNC:5255]	1370	1.171	0.0443	No
3	RWDD4	RWD domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23750]	1492	1.113	0.0736	No
4	VTI1BP2	vesicle transport through interaction with t-SNAREs 1B pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:43728]	3344	0.519	0.0388	No
5	WWC2	WW and C2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24148]	3528	0.485	0.0481	No
6	STOX2	storkhead box 2 [Source:HGNC Symbol;Acc:HGNC:25450]	5025	0.229	0.0143	No
7	ICE2P1	interactor of little elongation complex ELL subunit 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:48856]	5744	0.126	-0.0014	No
8	ZFP42	ZFP42 zinc finger protein [Source:HGNC Symbol;Acc:HGNC:30949]	5884	0.109	-0.0020	No
9	AGGF1P1	angiogenic factor with G-patch and FHA domains 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:38051]	5954	0.101	-0.0009	No
10	SLC25A5P6	solute carrier family 25 member 5 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:512]	6377	0.045	-0.0110	No
11	FAT1	FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]	6663	0.002	-0.0186	No
12	RNU6-335P	RNA, U6 small nuclear 335, pseudogene [Source:HGNC Symbol;Acc:HGNC:47298]	6687	0.000	-0.0192	No
13	RNU6-1053P	RNA, U6 small nuclear 1053, pseudogene [Source:HGNC Symbol;Acc:HGNC:48016]	7279	0.000	-0.0352	No
14	RNU6-1055P	RNA, U6 small nuclear 1055, pseudogene [Source:HGNC Symbol;Acc:HGNC:48018]	7339	0.000	-0.0368	No
15	RNU6-173P	RNA, U6 small nuclear 173, pseudogene [Source:HGNC Symbol;Acc:HGNC:47136]	7416	0.000	-0.0389	No
16	LINC01262	long intergenic non-protein coding RNA 1262 [Source:HGNC Symbol;Acc:HGNC:50275]	7425	0.000	-0.0391	No
17	HELT	helt bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:33783]	7476	0.000	-0.0404	No
18	LINC01596	long intergenic non-protein coding RNA 1596 [Source:HGNC Symbol;Acc:HGNC:51591]	7980	0.000	-0.0540	No
19	RNU2-34P	RNA, U2 small nuclear 34, pseudogene [Source:HGNC Symbol;Acc:HGNC:48527]	8540	0.000	-0.0691	No
20	LINC01060	long intergenic non-protein coding RNA 1060 [Source:HGNC Symbol;Acc:HGNC:49081]	9251	0.000	-0.0883	No
21	LINC01093	long intergenic non-protein coding RNA 1093 [Source:HGNC Symbol;Acc:HGNC:49218]	9266	0.000	-0.0887	No
22	LRP2BP	LRP2 binding protein [Source:HGNC Symbol;Acc:HGNC:25434]	9806	0.000	-0.1033	No
23	MIR3945HG	MIR3945 host gene [Source:HGNC Symbol;Acc:HGNC:52002]	10229	0.000	-0.1147	No
24	KLKB1	kallikrein B1 [Source:HGNC Symbol;Acc:HGNC:6371]	11375	0.000	-0.1457	No
25	ORAOV1P1	oral cancer overexpressed 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39203]	11997	0.000	-0.1624	No
26	RNU4-64P	RNA, U4 small nuclear 64, pseudogene [Source:HGNC Symbol;Acc:HGNC:47000]	12035	0.000	-0.1634	No
27	RNU7-192P	RNA, U7 small nuclear 192 pseudogene [Source:HGNC Symbol;Acc:HGNC:45726]	12268	0.000	-0.1697	No
28	WWC2-AS2	WWC2 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:26390]	12403	0.000	-0.1733	No
29	WWC2-AS1	WWC2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41041]	12407	0.000	-0.1734	No
30	ADAM20P3	ADAM metallopeptidase domain 20 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:43902]	13365	0.000	-0.1993	No
31	F11-AS1	F11 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27725]	13846	0.000	-0.2123	No
32	SORBS2	sorbin and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24098]	14458	0.000	-0.2288	No
33	MLLT10P2	MLLT10 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39141]	14649	0.000	-0.2339	No
34	LINC02515	long intergenic non-protein coding RNA 2515 [Source:HGNC Symbol;Acc:HGNC:53504]	14684	0.000	-0.2348	No
35	LINC02514	long intergenic non-protein coding RNA 2514 [Source:HGNC Symbol;Acc:HGNC:53503]	14685	0.000	-0.2348	No
36	LINC02508	long intergenic non-protein coding RNA 2508 [Source:HGNC Symbol;Acc:HGNC:53497]	14700	0.000	-0.2352	No
37	LINC02492	long intergenic non-protein coding RNA 2492 [Source:HGNC Symbol;Acc:HGNC:53476]	14876	0.000	-0.2400	No
38	LINC02437	long intergenic non-protein coding RNA 2437 [Source:HGNC Symbol;Acc:HGNC:53369]	15022	0.000	-0.2439	No
39	LINC02434	long intergenic non-protein coding RNA 2434 [Source:HGNC Symbol;Acc:HGNC:53365]	15025	0.000	-0.2439	No
40	LINC02436	long intergenic non-protein coding RNA 2436 [Source:HGNC Symbol;Acc:HGNC:53368]	15027	0.000	-0.2440	No
41	LINC02427	long intergenic non-protein coding RNA 2427 [Source:HGNC Symbol;Acc:HGNC:53358]	15033	0.000	-0.2441	No
42	DUX4L1	double homeobox 4 like 1 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:3082]	15086	0.000	-0.2455	No
43	DUX4L2	double homeobox 4 like 2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:37267]	15087	0.000	-0.2455	No
44	DUX4L3	double homeobox 4 like 3 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:38688]	15089	0.000	-0.2455	No
45	DUX4L4	double homeobox 4 like 4 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:38686]	15090	0.000	-0.2455	No
46	DUX4L5	double homeobox 4 like 5 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:38689]	15091	0.000	-0.2455	No
47	DUX4L6	double homeobox 4 like 6 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:37265]	15094	0.000	-0.2456	No
48	DUX4L7	double homeobox 4 like 7 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:37266]	15096	0.000	-0.2456	No
49	DUX4L8	double homeobox 4 like 8 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:38670]	15097	0.000	-0.2456	No
50	DUX4L9	double homeobox 4 like 9 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:33855]	15098	0.000	-0.2456	No
51	LINC02363	long intergenic non-protein coding RNA 2363 [Source:HGNC Symbol;Acc:HGNC:53286]	15196	0.000	-0.2482	No
52	LINC02365	long intergenic non-protein coding RNA 2365 [Source:HGNC Symbol;Acc:HGNC:53285]	15198	0.000	-0.2483	No
53	LINC02362	long intergenic non-protein coding RNA 2362 [Source:HGNC Symbol;Acc:HGNC:53284]	15201	0.000	-0.2483	No
54	LINC02374	long intergenic non-protein coding RNA 2374 [Source:HGNC Symbol;Acc:HGNC:53296]	15263	0.000	-0.2500	No
55	MTNR1A	melatonin receptor 1A [Source:HGNC Symbol;Acc:HGNC:7463]	15935	0.000	-0.2681	No
56	F11	coagulation factor XI [Source:HGNC Symbol;Acc:HGNC:3529]	16533	0.000	-0.2842	No
57	FRG2	FSHD region gene 2 [Source:HGNC Symbol;Acc:HGNC:19136]	16704	0.000	-0.2888	No
58	CLUHP4	clustered mitochondria homolog pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:38470]	16827	0.000	-0.2921	No
59	PDLIM3	PDZ and LIM domain 3 [Source:HGNC Symbol;Acc:HGNC:20767]	17782	0.000	-0.3179	No
60	RNU6-479P	RNA, U6 small nuclear 479, pseudogene [Source:HGNC Symbol;Acc:HGNC:47442]	18136	0.000	-0.3275	No
61	RN7SL28P	RNA, 7SL, cytoplasmic 28, pseudogene [Source:HGNC Symbol;Acc:HGNC:46044]	18369	0.000	-0.3337	No
62	RN7SKP67	RN7SK pseudogene 67 [Source:HGNC Symbol;Acc:HGNC:45791]	18743	0.000	-0.3438	No
63	RNA5SP175	RNA, 5S ribosomal pseudogene 175 [Source:HGNC Symbol;Acc:HGNC:43075]	18805	0.000	-0.3455	No
64	RNA5SP174	RNA, 5S ribosomal pseudogene 174 [Source:HGNC Symbol;Acc:HGNC:43074]	18806	0.000	-0.3455	No
65	SLED1	proteoglycan 3, pro eosinophil major basic protein 2 pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:643036]	19749	0.000	-0.3709	No
66	DUX4	double homeobox 4 [Source:HGNC Symbol;Acc:HGNC:50800]	19774	0.000	-0.3716	No
67	MIR3945	microRNA 3945 [Source:HGNC Symbol;Acc:HGNC:38954]	20890	0.000	-0.4017	No
68	TRIML2	tripartite motif family like 2 [Source:HGNC Symbol;Acc:HGNC:26378]	21182	0.000	-0.4096	No
69	TRIML1	tripartite motif family like 1 [Source:HGNC Symbol;Acc:HGNC:26698]	21191	0.000	-0.4098	No
70	MRPS36P2	mitochondrial ribosomal protein S36 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:29772]	22125	0.000	-0.4350	No
71	RPSAP70	ribosomal protein SA pseudogene 70 [Source:HGNC Symbol;Acc:HGNC:51923]	22424	0.000	-0.4431	No
72	RARRES2P4	retinoic acid receptor responder 2 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:48703]	22889	0.000	-0.4556	No
73	CLDN22	claudin 22 [Source:HGNC Symbol;Acc:HGNC:2044]	24737	0.000	-0.5056	No
74	CLDN24	claudin 24 [Source:HGNC Symbol;Acc:HGNC:37200]	24741	0.000	-0.5057	No
75	RNU1-51P	RNA, U1 small nuclear 51, pseudogene [Source:HGNC Symbol;Acc:HGNC:48393]	25314	0.000	-0.5211	No
76	MIR4455	microRNA 4455 [Source:HGNC Symbol;Acc:HGNC:41536]	25566	0.000	-0.5279	No
77	DBET	D4Z4 binding element transcript [Source:HGNC Symbol;Acc:HGNC:43904]	25866	0.000	-0.5360	No
78	CCDC110	coiled-coil domain containing 110 [Source:HGNC Symbol;Acc:HGNC:28504]	25915	0.000	-0.5373	No
79	FLJ38576	uncharacterized LOC651430 [Source:NCBI gene (formerly Entrezgene);Acc:651430]	26753	0.000	-0.5599	No
80	RPL23AP84	ribosomal protein L23a pseudogene 84 [Source:HGNC Symbol;Acc:HGNC:51575]	27552	-0.005	-0.5813	No
81	FAM149A	family with sequence similarity 149 member A [Source:HGNC Symbol;Acc:HGNC:24527]	29692	-0.267	-0.6313	No
82	DCTD	dCMP deaminase [Source:HGNC Symbol;Acc:HGNC:2710]	30277	-0.340	-0.6371	No
83	TRAPPC11	trafficking protein particle complex 11 [Source:HGNC Symbol;Acc:HGNC:25751]	31180	-0.466	-0.6479	Yes
84	FRG1	FSHD region gene 1 [Source:HGNC Symbol;Acc:HGNC:3954]	31380	-0.499	-0.6386	Yes
85	TUBB7P	tubulin beta 7 pseudogene [Source:HGNC Symbol;Acc:HGNC:12413]	31555	-0.532	-0.6277	Yes
86	CDKN2AIP	CDKN2A interacting protein [Source:HGNC Symbol;Acc:HGNC:24325]	32431	-0.701	-0.6308	Yes
87	ENPP6	ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:HGNC Symbol;Acc:HGNC:23409]	32642	-0.745	-0.6147	Yes
88	MYL12BP2	myosin light chain 12B pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:51650]	32939	-0.816	-0.5987	Yes
89	IRF2	interferon regulatory factor 2 [Source:HGNC Symbol;Acc:HGNC:6117]	33265	-0.907	-0.5809	Yes
90	CFAP97	cilia and flagella associated protein 97 [Source:HGNC Symbol;Acc:HGNC:29276]	33350	-0.926	-0.5560	Yes
91	SLC25A4	solute carrier family 25 member 4 [Source:HGNC Symbol;Acc:HGNC:10990]	34434	-1.283	-0.5477	Yes
92	C4orf47	chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346]	34486	-1.307	-0.5107	Yes
93	UFSP2	UFM1 specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:25640]	34693	-1.387	-0.4756	Yes
94	CENPU	centromere protein U [Source:HGNC Symbol;Acc:HGNC:21348]	34917	-1.480	-0.4383	Yes
95	ACSL1	acyl-CoA synthetase long chain family member 1 [Source:HGNC Symbol;Acc:HGNC:3569]	35022	-1.526	-0.3963	Yes
96	CYP4V2	cytochrome P450 family 4 subfamily V member 2 [Source:HGNC Symbol;Acc:HGNC:23198]	35050	-1.539	-0.3519	Yes
97	CASP3	caspase 3 [Source:HGNC Symbol;Acc:HGNC:1504]	35251	-1.646	-0.3091	Yes
98	PRIMPOL	primase and DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:26575]	35436	-1.742	-0.2629	Yes
99	ING2	inhibitor of growth family member 2 [Source:HGNC Symbol;Acc:HGNC:6063]	36156	-2.280	-0.2155	Yes
100	SNX25	sorting nexin 25 [Source:HGNC Symbol;Acc:HGNC:21883]	36167	-2.286	-0.1488	Yes
101	CIBAR1P2	CIBAR1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:32287]	36337	-2.447	-0.0816	Yes
102	ANKRD37	ankyrin repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:29593]	36909	-3.476	0.0049	Yes