Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #KO_GAQ_versus_KO_NA.greenbergcls.cls #KO_GAQ_versus_KO_NA_repos |
| Phenotype | greenbergcls.cls#KO_GAQ_versus_KO_NA_repos |
| Upregulated in class | KO_NA |
| GeneSet | CHR6P25 |
| Enrichment Score (ES) | -0.62588537 |
| Normalized Enrichment Score (NES) | -1.2769561 |
| Nominal p-value | 0.071611255 |
| FDR q-value | 0.64435023 |
| FWER p-Value | 1.0 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | PSMC1P11 | proteasome 26S subunit, ATPase 1 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:39786] | 1376 | 1.168 | 0.0058 | No |
| 2 | FAM136BP | family with sequence similarity 136 member B, pseudogene [Source:HGNC Symbol;Acc:HGNC:21110] | 1481 | 1.119 | 0.0441 | No |
| 3 | LYRM4 | LYR motif containing 4 [Source:HGNC Symbol;Acc:HGNC:21365] | 2373 | 0.762 | 0.0480 | No |
| 4 | AL033523.1 | novel transcript | 2582 | 0.696 | 0.0680 | No |
| 5 | HMGN2P28 | high mobility group nucleosomal binding domain 2 pseudogene 28 [Source:HGNC Symbol;Acc:HGNC:39395] | 3387 | 0.510 | 0.0651 | No |
| 6 | IRF4 | interferon regulatory factor 4 [Source:HGNC Symbol;Acc:HGNC:6119] | 4996 | 0.233 | 0.0302 | No |
| 7 | PSMG4 | proteasome assembly chaperone 4 [Source:HGNC Symbol;Acc:HGNC:21108] | 5925 | 0.104 | 0.0090 | No |
| 8 | TDGF1P4 | teratocarcinoma-derived growth factor 1 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:11704] | 7499 | 0.000 | -0.0335 | No |
| 9 | LINC01600 | long intergenic non-protein coding RNA 1600 [Source:HGNC Symbol;Acc:HGNC:21600] | 7645 | 0.000 | -0.0374 | No |
| 10 | LINC01011 | long intergenic non-protein coding RNA 1011 [Source:HGNC Symbol;Acc:HGNC:33812] | 8367 | 0.000 | -0.0569 | No |
| 11 | AL159166.1 | novel transcript | 9027 | 0.000 | -0.0747 | No |
| 12 | C6orf201 | chromosome 6 open reading frame 201 [Source:HGNC Symbol;Acc:HGNC:21620] | 9270 | 0.000 | -0.0813 | No |
| 13 | LY86 | lymphocyte antigen 86 [Source:HGNC Symbol;Acc:HGNC:16837] | 9497 | 0.000 | -0.0874 | No |
| 14 | OR4F1P | olfactory receptor family 4 subfamily F member 1 pseudogene [Source:HGNC Symbol;Acc:HGNC:8298] | 11871 | 0.000 | -0.1515 | No |
| 15 | AL021328.1 | novel transcript, antisense to FARS2 | 13881 | 0.000 | -0.2057 | No |
| 16 | FAM217A | family with sequence similarity 217 member A [Source:HGNC Symbol;Acc:HGNC:21362] | 14233 | 0.000 | -0.2152 | No |
| 17 | LINC02533 | long intergenic non-protein coding RNA 2533 [Source:HGNC Symbol;Acc:HGNC:53566] | 14724 | 0.000 | -0.2284 | No |
| 18 | LINC02525 | long intergenic non-protein coding RNA 2525 [Source:HGNC Symbol;Acc:HGNC:53545] | 14738 | 0.000 | -0.2288 | No |
| 19 | LINC02521 | long intergenic non-protein coding RNA 2521 [Source:HGNC Symbol;Acc:HGNC:53560] | 14743 | 0.000 | -0.2289 | No |
| 20 | MIR5683 | microRNA 5683 [Source:HGNC Symbol;Acc:HGNC:43453] | 15558 | 0.000 | -0.2509 | No |
| 21 | PXDC1 | PX domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21361] | 15635 | 0.000 | -0.2529 | No |
| 22 | AL035696.3 | novel transcript | 15650 | 0.000 | -0.2533 | No |
| 23 | RN7SL554P | RNA, 7SL, cytoplasmic 554, pseudogene [Source:HGNC Symbol;Acc:HGNC:46570] | 15836 | 0.000 | -0.2583 | No |
| 24 | SNAPC5P1 | small nuclear RNA activating complex polypeptide 5 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:38667] | 16144 | 0.000 | -0.2666 | No |
| 25 | WBP1LP12 | WBP1L pseudogene 12 [Source:HGNC Symbol;Acc:HGNC:51472] | 16359 | 0.000 | -0.2724 | No |
| 26 | PPP1R3G | protein phosphatase 1 regulatory subunit 3G [Source:HGNC Symbol;Acc:HGNC:14945] | 17644 | 0.000 | -0.3071 | No |
| 27 | LY86-AS1 | LY86 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:26593] | 19021 | 0.000 | -0.3442 | No |
| 28 | AL022097.1 | novel transcript, antisense to FARS2 | 19193 | 0.000 | -0.3489 | No |
| 29 | RNA5SP202 | RNA, 5S ribosomal pseudogene 202 [Source:HGNC Symbol;Acc:HGNC:43102] | 19328 | 0.000 | -0.3525 | No |
| 30 | RNA5SP201 | RNA, 5S ribosomal pseudogene 201 [Source:HGNC Symbol;Acc:HGNC:43101] | 19329 | 0.000 | -0.3525 | No |
| 31 | SERPINB9P1 | serpin family B member 9 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:28590] | 19725 | 0.000 | -0.3632 | No |
| 32 | RN7SL352P | RNA, 7SL, cytoplasmic 352, pseudogene [Source:HGNC Symbol;Acc:HGNC:46368] | 19925 | 0.000 | -0.3685 | No |
| 33 | SERPINB8P1 | serpin family B member 8 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:8953] | 20625 | 0.000 | -0.3874 | No |
| 34 | CNN3P1 | calponin 3 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:38666] | 22097 | 0.000 | -0.4271 | No |
| 35 | GMDS-DT | GMDS divergent transcript [Source:HGNC Symbol;Acc:HGNC:48993] | 22267 | 0.000 | -0.4317 | No |
| 36 | MIR3691 | microRNA 3691 [Source:HGNC Symbol;Acc:HGNC:38909] | 22577 | 0.000 | -0.4401 | No |
| 37 | F13A1 | coagulation factor XIII A chain [Source:HGNC Symbol;Acc:HGNC:3531] | 22827 | 0.000 | -0.4468 | No |
| 38 | HUS1B | HUS1 checkpoint clamp component B [Source:HGNC Symbol;Acc:HGNC:16485] | 22899 | 0.000 | -0.4487 | No |
| 39 | CICP18 | capicua transcriptional repressor pseudogene 18 [Source:HGNC Symbol;Acc:HGNC:48828] | 23054 | 0.000 | -0.4529 | No |
| 40 | FAM50B | family with sequence similarity 50 member B [Source:HGNC Symbol;Acc:HGNC:18789] | 23145 | 0.000 | -0.4553 | No |
| 41 | MYLK4 | myosin light chain kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:27972] | 23512 | 0.000 | -0.4652 | No |
| 42 | FOXQ1 | forkhead box Q1 [Source:HGNC Symbol;Acc:HGNC:20951] | 23513 | 0.000 | -0.4652 | No |
| 43 | FOXF2 | forkhead box F2 [Source:HGNC Symbol;Acc:HGNC:3810] | 23672 | 0.000 | -0.4694 | No |
| 44 | RN7SL221P | RNA, 7SL, cytoplasmic 221, pseudogene [Source:HGNC Symbol;Acc:HGNC:46237] | 24511 | 0.000 | -0.4921 | No |
| 45 | SLC22A23 | solute carrier family 22 member 23 [Source:HGNC Symbol;Acc:HGNC:21106] | 26762 | 0.000 | -0.5529 | No |
| 46 | FOXCUT | FOXC1 upstream transcript [Source:HGNC Symbol;Acc:HGNC:50650] | 26877 | 0.000 | -0.5559 | No |
| 47 | MIR4645 | microRNA 4645 [Source:HGNC Symbol;Acc:HGNC:41689] | 26956 | 0.000 | -0.5581 | No |
| 48 | PRPF4B | pre-mRNA processing factor 4B [Source:HGNC Symbol;Acc:HGNC:17346] | 27968 | -0.058 | -0.5832 | No |
| 49 | RIPK1 | receptor interacting serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:10019] | 28486 | -0.116 | -0.5929 | No |
| 50 | RPP40 | ribonuclease P/MRP subunit p40 [Source:HGNC Symbol;Acc:HGNC:20992] | 28681 | -0.140 | -0.5930 | No |
| 51 | HNRNPA1P37 | heterogeneous nuclear ribonucleoprotein A1 pseudogene 37 [Source:HGNC Symbol;Acc:HGNC:48766] | 29164 | -0.201 | -0.5987 | No |
| 52 | EXOC2 | exocyst complex component 2 [Source:HGNC Symbol;Acc:HGNC:24968] | 29529 | -0.244 | -0.5995 | No |
| 53 | CDYL | chromodomain Y like [Source:HGNC Symbol;Acc:HGNC:1811] | 30506 | -0.368 | -0.6123 | Yes |
| 54 | BTF3P7 | basic transcription factor 3 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:38569] | 30620 | -0.384 | -0.6013 | Yes |
| 55 | TUBB2BP1 | tubulin beta 2B class IIb pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42332] | 31273 | -0.481 | -0.6012 | Yes |
| 56 | WRNIP1 | WRN helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876] | 31405 | -0.507 | -0.5861 | Yes |
| 57 | GLRX3P2 | glutaredoxin 3 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:49788] | 32340 | -0.680 | -0.5863 | Yes |
| 58 | FOXC1 | forkhead box C1 [Source:HGNC Symbol;Acc:HGNC:3800] | 32796 | -0.781 | -0.5699 | Yes |
| 59 | SERPINB1 | serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311] | 33250 | -0.901 | -0.5490 | Yes |
| 60 | NQO2 | N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856] | 33352 | -0.927 | -0.5176 | Yes |
| 61 | TUBB2A | tubulin beta 2A class IIa [Source:HGNC Symbol;Acc:HGNC:12412] | 33749 | -1.047 | -0.4899 | Yes |
| 62 | FARS2 | phenylalanyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21062] | 33883 | -1.089 | -0.4534 | Yes |
| 63 | GMDS | GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369] | 34200 | -1.198 | -0.4179 | Yes |
| 64 | SERPINB6 | serpin family B member 6 [Source:HGNC Symbol;Acc:HGNC:8950] | 34232 | -1.207 | -0.3743 | Yes |
| 65 | TUBB2B | tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829] | 34431 | -1.281 | -0.3326 | Yes |
| 66 | PKMP5 | pyruvate kinase M1/2 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:44247] | 34537 | -1.328 | -0.2866 | Yes |
| 67 | SERPINB9 | serpin family B member 9 [Source:HGNC Symbol;Acc:HGNC:8955] | 34996 | -1.514 | -0.2433 | Yes |
| 68 | ECI2 | enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601] | 35106 | -1.567 | -0.1886 | Yes |
| 69 | NRN1 | neuritin 1 [Source:HGNC Symbol;Acc:HGNC:17972] | 35107 | -1.568 | -0.1310 | Yes |
| 70 | DUSP22 | dual specificity phosphatase 22 [Source:HGNC Symbol;Acc:HGNC:16077] | 36257 | -2.367 | -0.0750 | Yes |
| 71 | BPHL | biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094] | 36505 | -2.651 | 0.0158 | Yes |
