Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_GAQ_versus_KO_NA.greenbergcls.cls
#KO_GAQ_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetGHANDHI_BYSTANDER_IRRADIATION_UP
Enrichment Score (ES)0.80056137
Normalized Enrichment Score (NES)2.0001433
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: GHANDHI_BYSTANDER_IRRADIATION_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1Binterleukin 1 beta [Source:HGNC Symbol;Acc:HGNC:5992]04.9900.0533Yes
2PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]34.9340.1060Yes
3NFKBIZNFKB inhibitor zeta [Source:HGNC Symbol;Acc:HGNC:29805]104.7760.1569Yes
4DUSP2dual specificity phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:3068]154.6820.2068Yes
5BCL2A1BCL2 related protein A1 [Source:HGNC Symbol;Acc:HGNC:991]404.2340.2514Yes
6DUSP5dual specificity phosphatase 5 [Source:HGNC Symbol;Acc:HGNC:3071]454.1930.2961Yes
7CREB5cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]464.1920.3409Yes
8SLC7A11solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]554.0830.3844Yes
9IL1Ainterleukin 1 alpha [Source:HGNC Symbol;Acc:HGNC:5991]574.0350.4275Yes
10POU2F2POU class 2 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9213]773.7450.4670Yes
11OSGIN2oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]1003.5390.5042Yes
12GCH1GTP cyclohydrolase 1 [Source:HGNC Symbol;Acc:HGNC:4193]1653.0810.5354Yes
13SOD2superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180]2122.8710.5649Yes
14SLC39A14solute carrier family 39 member 14 [Source:HGNC Symbol;Acc:HGNC:20858]2242.7910.5944Yes
15TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]2572.6680.6220Yes
16LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]2842.5780.6489Yes
17SERPINB2serpin family B member 2 [Source:HGNC Symbol;Acc:HGNC:8584]5122.0280.6644Yes
18ZC3H12Czinc finger CCCH-type containing 12C [Source:HGNC Symbol;Acc:HGNC:29362]5132.0240.6861Yes
19IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]5491.9700.7062Yes
20GCLMglutamate-cysteine ligase modifier subunit [Source:HGNC Symbol;Acc:HGNC:4312]6731.7580.7216Yes
21MT1Emetallothionein 1E [Source:HGNC Symbol;Acc:HGNC:7397]10021.4120.7279Yes
22SAT1spermidine/spermine N1-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10540]10621.3660.7409Yes
23PTGESprostaglandin E synthase [Source:HGNC Symbol;Acc:HGNC:9599]17620.9790.7325Yes
24MT1Xmetallothionein 1X [Source:HGNC Symbol;Acc:HGNC:7405]20010.8900.7355Yes
25CXCL10C-X-C motif chemokine ligand 10 [Source:HGNC Symbol;Acc:HGNC:10637]20560.8710.7434Yes
26PPP4R3Bprotein phosphatase 4 regulatory subunit 3B [Source:HGNC Symbol;Acc:HGNC:29267]21830.8240.7488Yes
27C9orf72C9orf72-SMCR8 complex subunit [Source:HGNC Symbol;Acc:HGNC:28337]23120.7790.7537Yes
28SLC16A6solute carrier family 16 member 6 [Source:HGNC Symbol;Acc:HGNC:10927]24090.7530.7591Yes
29SLC39A8solute carrier family 39 member 8 [Source:HGNC Symbol;Acc:HGNC:20862]24820.7290.7650Yes
30ZSWIM8zinc finger SWIM-type containing 8 [Source:HGNC Symbol;Acc:HGNC:23528]25070.7200.7720Yes
31TNFSF15TNF superfamily member 15 [Source:HGNC Symbol;Acc:HGNC:11931]26740.6720.7747Yes
32AHRaryl hydrocarbon receptor [Source:HGNC Symbol;Acc:HGNC:348]27160.6620.7807Yes
33CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]27750.6460.7860Yes
34PLEK2pleckstrin 2 [Source:HGNC Symbol;Acc:HGNC:19238]28170.6360.7917Yes
35MT1Bmetallothionein 1B [Source:HGNC Symbol;Acc:HGNC:7394]28470.6300.7976Yes
36TUT7terminal uridylyl transferase 7 [Source:HGNC Symbol;Acc:HGNC:25817]30590.5780.7981Yes
37MT1Hmetallothionein 1H [Source:HGNC Symbol;Acc:HGNC:7400]32900.5310.7976Yes
38IRAK3interleukin 1 receptor associated kinase 3 [Source:HGNC Symbol;Acc:HGNC:17020]33830.5110.8006Yes
39MT1Gmetallothionein 1G [Source:HGNC Symbol;Acc:HGNC:7399]39010.4170.7910No
40INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]40220.3930.7920No
41CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]44110.3260.7850No
42DNAJB4DnaJ heat shock protein family (Hsp40) member B4 [Source:HGNC Symbol;Acc:HGNC:14886]45020.3120.7859No
43RGS9regulator of G protein signaling 9 [Source:HGNC Symbol;Acc:HGNC:10004]54830.1620.7612No
44NAMPTnicotinamide phosphoribosyltransferase [Source:HGNC Symbol;Acc:HGNC:30092]54920.1600.7626No
45NAMPTP1nicotinamide phosphoribosyltransferase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:17633]58060.1160.7554No
46ATP6V1C1ATPase H+ transporting V1 subunit C1 [Source:HGNC Symbol;Acc:HGNC:856]58990.1070.7541No
47MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]59300.1030.7544No
48CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]60780.0830.7513No
49MCTP2multiple C2 and transmembrane domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25636]82570.0000.6924No
50POPDC3popeye domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17649]89890.0000.6727No
51SLC16A6P1SLC16A6 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:48932]106860.0000.6269No
52B3GNT5UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:15684]109980.0000.6185No
53SLC6A15solute carrier family 6 member 15 [Source:HGNC Symbol;Acc:HGNC:13621]120510.0000.5900No
54PTGFRprostaglandin F receptor [Source:HGNC Symbol;Acc:HGNC:9600]120670.0000.5896No
55IL33interleukin 33 [Source:HGNC Symbol;Acc:HGNC:16028]140060.0000.5373No
56HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]145640.0000.5222No
57EPB41L4Berythrocyte membrane protein band 4.1 like 4B [Source:HGNC Symbol;Acc:HGNC:19818]152030.0000.5050No
58PRR7-AS1PRR7 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27961]171630.0000.4520No
59SRSF12serine and arginine rich splicing factor 12 [Source:HGNC Symbol;Acc:HGNC:21220]175650.0000.4412No
60MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]190870.0000.4001No
61CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]194240.0000.3910No
62CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]194330.0000.3908No
63IFNEinterferon epsilon [Source:HGNC Symbol;Acc:HGNC:18163]207790.0000.3545No
64MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]208660.0000.3521No
65KYNUkynureninase [Source:HGNC Symbol;Acc:HGNC:6469]220570.0000.3200No
66TSLPthymic stromal lymphopoietin [Source:HGNC Symbol;Acc:HGNC:30743]221320.0000.3180No
67CD69CD69 molecule [Source:HGNC Symbol;Acc:HGNC:1694]231040.0000.2918No
68LAMB3laminin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6490]237820.0000.2735No
69C2CD4BC2 calcium dependent domain containing 4B [Source:HGNC Symbol;Acc:HGNC:33628]247090.0000.2484No
70FGF2fibroblast growth factor 2 [Source:HGNC Symbol;Acc:HGNC:3676]254340.0000.2289No
71BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]27655-0.0210.1691No
72STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]28009-0.0630.1602No
73GPR68G protein-coupled receptor 68 [Source:HGNC Symbol;Acc:HGNC:4519]28166-0.0800.1569No
74TCIMtranscriptional and immune response regulator [Source:HGNC Symbol;Acc:HGNC:1357]28537-0.1240.1482No
75G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]29220-0.2060.1320No
76TESCtescalcin [Source:HGNC Symbol;Acc:HGNC:26065]29256-0.2120.1333No
77GADD45Ggrowth arrest and DNA damage inducible gamma [Source:HGNC Symbol;Acc:HGNC:4097]29334-0.2210.1336No
78MCTP1multiple C2 and transmembrane domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26183]29456-0.2360.1328No
79PHEXphosphate regulating endopeptidase homolog X-linked [Source:HGNC Symbol;Acc:HGNC:8918]30239-0.3350.1153No
80PLA2G4Aphospholipase A2 group IVA [Source:HGNC Symbol;Acc:HGNC:9035]32235-0.6610.0685No
81RELBRELB proto-oncogene, NF-kB subunit [Source:HGNC Symbol;Acc:HGNC:9956]33196-0.8850.0520No
82RNF128ring finger protein 128 [Source:HGNC Symbol;Acc:HGNC:21153]35516-1.7810.0083No
83LRRC8Bleucine rich repeat containing 8 VRAC subunit B [Source:HGNC Symbol;Acc:HGNC:30692]36795-3.1960.0080No
Table: GSEA details [plain text format]



Fig 2: GHANDHI_BYSTANDER_IRRADIATION_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GHANDHI_BYSTANDER_IRRADIATION_UP: Random ES distribution   
Gene set null distribution of ES for GHANDHI_BYSTANDER_IRRADIATION_UP