Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_GAQ_versus_KO_NA.greenbergcls.cls
#KO_GAQ_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetKONG_E2F3_TARGETS
Enrichment Score (ES)-0.7800547
Normalized Enrichment Score (NES)-1.6659439
Nominal p-value0.0
FDR q-value0.0034921216
FWER p-Value0.07
Table: GSEA Results Summary



Fig 1: Enrichment plot: KONG_E2F3_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GAS5growth arrest specific 5 [Source:HGNC Symbol;Acc:HGNC:16355]843.6510.0224No
2NR1D1nuclear receptor subfamily 1 group D member 1 [Source:HGNC Symbol;Acc:HGNC:7962]2042.8990.0387No
3SRSF7serine and arginine rich splicing factor 7 [Source:HGNC Symbol;Acc:HGNC:10789]16571.0350.0065No
4E2F3E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]16921.0140.0124No
5MED1mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]32950.530-0.0273No
6CENPHcentromere protein H [Source:HGNC Symbol;Acc:HGNC:17268]41770.365-0.0487No
7IGF2BP1insulin like growth factor 2 mRNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:28866]46330.292-0.0590No
8TAL2TAL bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11557]54170.171-0.0790No
9FBXO45F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]54910.160-0.0799No
10H4C15H4 clustered histone 15 [Source:HGNC Symbol;Acc:HGNC:29607]128620.000-0.2791No
11CDCA5cell division cycle associated 5 [Source:HGNC Symbol;Acc:HGNC:14626]167860.000-0.3852No
12PRLprolactin [Source:HGNC Symbol;Acc:HGNC:9445]200830.000-0.4743No
13PSORS1C2psoriasis susceptibility 1 candidate 2 [Source:HGNC Symbol;Acc:HGNC:17199]207360.000-0.4919No
14F13A1coagulation factor XIII A chain [Source:HGNC Symbol;Acc:HGNC:3531]228270.000-0.5484No
15GP1BAglycoprotein Ib platelet subunit alpha [Source:HGNC Symbol;Acc:HGNC:4439]233520.000-0.5626No
16SYCE2synaptonemal complex central element protein 2 [Source:HGNC Symbol;Acc:HGNC:27411]27673-0.024-0.6792No
17MYBMYB proto-oncogene, transcription factor [Source:HGNC Symbol;Acc:HGNC:7545]28496-0.118-0.7006No
18H2AC4H2A clustered histone 4 [Source:HGNC Symbol;Acc:HGNC:4734]29088-0.192-0.7153No
19RPRD1Bregulation of nuclear pre-mRNA domain containing 1B [Source:HGNC Symbol;Acc:HGNC:16209]29528-0.244-0.7255No
20FAM111Afamily with sequence similarity 111 member A [Source:HGNC Symbol;Acc:HGNC:24725]30332-0.345-0.7449No
21MAPK8mitogen-activated protein kinase 8 [Source:HGNC Symbol;Acc:HGNC:6881]30629-0.386-0.7503No
22NUP50nucleoporin 50 [Source:HGNC Symbol;Acc:HGNC:8065]31395-0.504-0.7676No
23CENPQcentromere protein Q [Source:HGNC Symbol;Acc:HGNC:21347]31440-0.511-0.7653No
24RPL12ribosomal protein L12 [Source:HGNC Symbol;Acc:HGNC:10302]31521-0.526-0.7639No
25HJURPHolliday junction recognition protein [Source:HGNC Symbol;Acc:HGNC:25444]31702-0.560-0.7650No
26FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]32050-0.618-0.7702No
27DNA2DNA replication helicase/nuclease 2 [Source:HGNC Symbol;Acc:HGNC:2939]32315-0.677-0.7728No
28DCKdeoxycytidine kinase [Source:HGNC Symbol;Acc:HGNC:2704]32562-0.724-0.7745No
29SKP2S-phase kinase associated protein 2 [Source:HGNC Symbol;Acc:HGNC:10901]32767-0.774-0.7748Yes
30TAF1DTATA-box binding protein associated factor, RNA polymerase I subunit D [Source:HGNC Symbol;Acc:HGNC:28759]32784-0.779-0.7700Yes
31LMNB1lamin B1 [Source:HGNC Symbol;Acc:HGNC:6637]32873-0.802-0.7670Yes
32TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]33018-0.836-0.7652Yes
33ERCC6LERCC excision repair 6 like, spindle assembly checkpoint helicase [Source:HGNC Symbol;Acc:HGNC:20794]33309-0.916-0.7669Yes
34DEPDC1DEP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22949]33402-0.941-0.7630Yes
35AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]33435-0.948-0.7575Yes
36HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]33703-1.035-0.7577Yes
37RBBP8RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]33843-1.077-0.7542Yes
38TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]33875-1.087-0.7477Yes
39CDC7cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]33908-1.097-0.7412Yes
40KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]33965-1.117-0.7351Yes
41CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]33967-1.118-0.7276Yes
42TACC3transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]34258-1.217-0.7272Yes
43USP1ubiquitin specific peptidase 1 [Source:HGNC Symbol;Acc:HGNC:12607]34276-1.225-0.7194Yes
44MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]34678-1.382-0.7209Yes
45FIGNL1fidgetin like 1 [Source:HGNC Symbol;Acc:HGNC:13286]34716-1.402-0.7125Yes
46RPL3ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]34804-1.438-0.7051Yes
47INCENPinner centromere protein [Source:HGNC Symbol;Acc:HGNC:6058]34866-1.461-0.6969Yes
48CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]34948-1.490-0.6890Yes
49PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]35100-1.565-0.6826Yes
50KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]35135-1.581-0.6728Yes
51RBL1RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]35256-1.647-0.6649Yes
52PBKPDZ binding kinase [Source:HGNC Symbol;Acc:HGNC:18282]35285-1.667-0.6544Yes
53RAD51RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:9817]35380-1.712-0.6454Yes
54CCNFcyclin F [Source:HGNC Symbol;Acc:HGNC:1591]35395-1.722-0.6342Yes
55NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]35440-1.743-0.6236Yes
56UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]35447-1.747-0.6120Yes
57SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]35471-1.761-0.6007Yes
58SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]35481-1.764-0.5891Yes
59HLXH2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]35486-1.769-0.5772Yes
60DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35498-1.774-0.5655Yes
61SPDL1spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]35578-1.826-0.5554Yes
62SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35602-1.838-0.5436Yes
63PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]35608-1.839-0.5313Yes
64ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]35653-1.875-0.5198Yes
65CDC6cell division cycle 6 [Source:HGNC Symbol;Acc:HGNC:1744]35691-1.899-0.5080Yes
66BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]35704-1.908-0.4955Yes
67PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]35709-1.910-0.4827Yes
68EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]35806-1.978-0.4719Yes
69HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]35808-1.979-0.4586Yes
70PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35905-2.049-0.4473Yes
71KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]35949-2.088-0.4344Yes
72CBX2chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]35969-2.103-0.4207Yes
73TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35971-2.105-0.4065Yes
74PSIP1PC4 and SFRS1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9527]36040-2.168-0.3938Yes
75NUF2NUF2 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:14621]36077-2.201-0.3799Yes
76NCAPGnon-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]36078-2.201-0.3650Yes
77UBE2Tubiquitin conjugating enzyme E2 T [Source:HGNC Symbol;Acc:HGNC:25009]36145-2.264-0.3515Yes
78IQGAP3IQ motif containing GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:20669]36173-2.293-0.3368Yes
79RAD54LRAD54 like [Source:HGNC Symbol;Acc:HGNC:9826]36182-2.302-0.3215Yes
80NCAPG2non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]36193-2.309-0.3061Yes
81NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36203-2.318-0.2907Yes
82MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36336-2.447-0.2778Yes
83BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36341-2.453-0.2613Yes
84CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36418-2.536-0.2463Yes
85RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36429-2.546-0.2294Yes
86NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36471-2.598-0.2129Yes
87MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36474-2.605-0.1954Yes
88H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36530-2.698-0.1787Yes
89CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]36614-2.799-0.1620Yes
90CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36617-2.804-0.1432Yes
91NCAPD2non-SMC condensin I complex subunit D2 [Source:HGNC Symbol;Acc:HGNC:24305]36642-2.836-0.1247Yes
92RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]36707-2.964-0.1064Yes
93CENPKcentromere protein K [Source:HGNC Symbol;Acc:HGNC:29479]36772-3.113-0.0871Yes
94CCNE1cyclin E1 [Source:HGNC Symbol;Acc:HGNC:1589]36823-3.251-0.0665Yes
95BRCA1BRCA1 DNA repair associated [Source:HGNC Symbol;Acc:HGNC:1100]36824-3.259-0.0445Yes
96CHAF1Bchromatin assembly factor 1 subunit B [Source:HGNC Symbol;Acc:HGNC:1911]36906-3.471-0.0233Yes
97TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]37048-4.1810.0011Yes
Table: GSEA details [plain text format]



Fig 2: KONG_E2F3_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KONG_E2F3_TARGETS: Random ES distribution   
Gene set null distribution of ES for KONG_E2F3_TARGETS