Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #KO_GAQ_versus_KO_NA.greenbergcls.cls #KO_GAQ_versus_KO_NA_repos |
| Phenotype | greenbergcls.cls#KO_GAQ_versus_KO_NA_repos |
| Upregulated in class | KO_GAQ |
| GeneSet | LIANG_SILENCED_BY_METHYLATION_2 |
| Enrichment Score (ES) | 0.8040214 |
| Normalized Enrichment Score (NES) | 1.935614 |
| Nominal p-value | 0.0 |
| FDR q-value | 7.2424486E-4 |
| FWER p-Value | 0.007 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | PTGS2 | prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605] | 3 | 4.934 | 0.0890 | Yes |
| 2 | CCL5 | C-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10632] | 6 | 4.903 | 0.1774 | Yes |
| 3 | SAA1 | serum amyloid A1 [Source:HGNC Symbol;Acc:HGNC:10513] | 11 | 4.769 | 0.2634 | Yes |
| 4 | IFI44 | interferon induced protein 44 [Source:HGNC Symbol;Acc:HGNC:16938] | 63 | 3.976 | 0.3338 | Yes |
| 5 | OAS1 | 2'-5'-oligoadenylate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:8086] | 143 | 3.206 | 0.3895 | Yes |
| 6 | IRF7 | interferon regulatory factor 7 [Source:HGNC Symbol;Acc:HGNC:6122] | 154 | 3.130 | 0.4457 | Yes |
| 7 | SOD2 | superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180] | 212 | 2.871 | 0.4960 | Yes |
| 8 | TNFAIP3 | TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896] | 257 | 2.668 | 0.5429 | Yes |
| 9 | OAS2 | 2'-5'-oligoadenylate synthetase 2 [Source:HGNC Symbol;Acc:HGNC:8087] | 272 | 2.610 | 0.5897 | Yes |
| 10 | STAT1 | signal transducer and activator of transcription 1 [Source:HGNC Symbol;Acc:HGNC:11362] | 305 | 2.496 | 0.6339 | Yes |
| 11 | MX1 | MX dynamin like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:7532] | 391 | 2.293 | 0.6729 | Yes |
| 12 | SERPINB2 | serpin family B member 2 [Source:HGNC Symbol;Acc:HGNC:8584] | 512 | 2.028 | 0.7063 | Yes |
| 13 | IL13RA2 | interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975] | 549 | 1.970 | 0.7409 | Yes |
| 14 | MX2 | MX dynamin like GTPase 2 [Source:HGNC Symbol;Acc:HGNC:7533] | 658 | 1.777 | 0.7701 | Yes |
| 15 | IFIT1 | interferon induced protein with tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:5407] | 977 | 1.436 | 0.7874 | Yes |
| 16 | IFIT2 | interferon induced protein with tetratricopeptide repeats 2 [Source:HGNC Symbol;Acc:HGNC:5409] | 1201 | 1.255 | 0.8040 | Yes |
| 17 | HBEGF | heparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059] | 2465 | 0.732 | 0.7831 | No |
| 18 | CXCL2 | C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603] | 2775 | 0.646 | 0.7865 | No |
| 19 | UCHL1 | ubiquitin C-terminal hydrolase L1 [Source:HGNC Symbol;Acc:HGNC:12513] | 3993 | 0.398 | 0.7608 | No |
| 20 | INHBA | inhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066] | 4022 | 0.393 | 0.7671 | No |
| 21 | IL6 | interleukin 6 [Source:HGNC Symbol;Acc:HGNC:6018] | 4084 | 0.383 | 0.7724 | No |
| 22 | CCL20 | C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619] | 4513 | 0.310 | 0.7664 | No |
| 23 | IFIT3 | interferon induced protein with tetratricopeptide repeats 3 [Source:HGNC Symbol;Acc:HGNC:5411] | 5571 | 0.150 | 0.7406 | No |
| 24 | CXCL5 | C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642] | 6078 | 0.083 | 0.7284 | No |
| 25 | THBD | thrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784] | 6217 | 0.065 | 0.7259 | No |
| 26 | AREG | amphiregulin [Source:HGNC Symbol;Acc:HGNC:651] | 7611 | 0.000 | 0.6882 | No |
| 27 | SLPI | secretory leukocyte peptidase inhibitor [Source:HGNC Symbol;Acc:HGNC:11092] | 9564 | 0.000 | 0.6355 | No |
| 28 | LCN2 | lipocalin 2 [Source:HGNC Symbol;Acc:HGNC:6526] | 11171 | 0.000 | 0.5922 | No |
| 29 | TNFSF10 | TNF superfamily member 10 [Source:HGNC Symbol;Acc:HGNC:11925] | 12644 | 0.000 | 0.5524 | No |
| 30 | BIK | BCL2 interacting killer [Source:HGNC Symbol;Acc:HGNC:1051] | 15674 | 0.000 | 0.4706 | No |
| 31 | H19 | H19 imprinted maternally expressed transcript [Source:HGNC Symbol;Acc:HGNC:4713] | 17185 | 0.000 | 0.4299 | No |
| 32 | ICAM1 | intercellular adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5344] | 18266 | 0.000 | 0.4007 | No |
| 33 | GAGE1 | G antigen 1 [Source:HGNC Symbol;Acc:HGNC:4098] | 18787 | 0.000 | 0.3866 | No |
| 34 | MMP1 | matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155] | 19087 | 0.000 | 0.3786 | No |
| 35 | CXCL6 | C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643] | 19419 | 0.000 | 0.3696 | No |
| 36 | DHRS2 | dehydrogenase/reductase 2 [Source:HGNC Symbol;Acc:HGNC:18349] | 19953 | 0.000 | 0.3552 | No |
| 37 | PI3 | peptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:8947] | 19981 | 0.000 | 0.3545 | No |
| 38 | IFI6 | interferon alpha inducible protein 6 [Source:HGNC Symbol;Acc:HGNC:4054] | 20673 | 0.000 | 0.3359 | No |
| 39 | H2AC18 | H2A clustered histone 18 [Source:HGNC Symbol;Acc:HGNC:4736] | 21731 | 0.000 | 0.3073 | No |
| 40 | KRT17 | keratin 17 [Source:HGNC Symbol;Acc:HGNC:6427] | 22001 | 0.000 | 0.3000 | No |
| 41 | CTAG1B | cancer/testis antigen 1B [Source:HGNC Symbol;Acc:HGNC:2491] | 22385 | 0.000 | 0.2897 | No |
| 42 | IFI44L | interferon induced protein 44 like [Source:HGNC Symbol;Acc:HGNC:17817] | 23719 | 0.000 | 0.2537 | No |
| 43 | CSF2 | colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434] | 24555 | 0.000 | 0.2312 | No |
| 44 | MAGEA12 | MAGE family member A12 [Source:HGNC Symbol;Acc:HGNC:6799] | 26548 | 0.000 | 0.1774 | No |
| 45 | MAGEA2 | MAGE family member A2 [Source:HGNC Symbol;Acc:HGNC:6800] | 26699 | 0.000 | 0.1733 | No |
| 46 | MAGEA3 | MAGE family member A3 [Source:HGNC Symbol;Acc:HGNC:6801] | 26704 | 0.000 | 0.1732 | No |
| 47 | MAGEA4 | MAGE family member A4 [Source:HGNC Symbol;Acc:HGNC:6802] | 26706 | 0.000 | 0.1732 | No |
| 48 | SSX2 | SSX family member 2 [Source:HGNC Symbol;Acc:HGNC:11336] | 27201 | 0.000 | 0.1599 | No |
| 49 | XAF1 | XIAP associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30932] | 27277 | 0.000 | 0.1578 | No |
| 50 | STC1 | stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373] | 28009 | -0.063 | 0.1392 | No |
| 51 | C3 | complement C3 [Source:HGNC Symbol;Acc:HGNC:1318] | 29098 | -0.192 | 0.1133 | No |
| 52 | STX3 | syntaxin 3 [Source:HGNC Symbol;Acc:HGNC:11438] | 30012 | -0.307 | 0.0942 | No |
| 53 | SP100 | SP100 nuclear antigen [Source:HGNC Symbol;Acc:HGNC:11206] | 30592 | -0.380 | 0.0854 | No |
| 54 | NT5E | 5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021] | 30795 | -0.410 | 0.0874 | No |
| 55 | C1S | complement C1s [Source:HGNC Symbol;Acc:HGNC:1247] | 30851 | -0.420 | 0.0935 | No |
| 56 | S100A4 | S100 calcium binding protein A4 [Source:HGNC Symbol;Acc:HGNC:10494] | 31611 | -0.540 | 0.0827 | No |
| 57 | H2AC6 | H2A clustered histone 6 [Source:HGNC Symbol;Acc:HGNC:4733] | 34425 | -1.278 | 0.0298 | No |
| 58 | H2BC6 | H2B clustered histone 6 [Source:HGNC Symbol;Acc:HGNC:4753] | 36221 | -2.334 | 0.0235 | No |
