Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_GAQ_versus_KO_NA.greenbergcls.cls
#KO_GAQ_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetPR_02
Enrichment Score (ES)0.48580906
Normalized Enrichment Score (NES)1.2783304
Nominal p-value0.0
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: PR_02   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SEMA4Csemaphorin 4C [Source:HGNC Symbol;Acc:HGNC:10731]304.4170.0412Yes
2PDGFBplatelet derived growth factor subunit B [Source:HGNC Symbol;Acc:HGNC:8800]494.1180.0798Yes
3MAP1Bmicrotubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]564.0650.1183Yes
4CALCRLcalcitonin receptor like receptor [Source:HGNC Symbol;Acc:HGNC:16709]673.9390.1555Yes
5ID3inhibitor of DNA binding 3, HLH protein [Source:HGNC Symbol;Acc:HGNC:5362]713.8700.1922Yes
6SKILSKI like proto-oncogene [Source:HGNC Symbol;Acc:HGNC:10897]1503.1520.2200Yes
7CXCL14C-X-C motif chemokine ligand 14 [Source:HGNC Symbol;Acc:HGNC:10640]2202.8110.2449Yes
8SMOXspermine oxidase [Source:HGNC Symbol;Acc:HGNC:15862]2872.5700.2675Yes
9SRGNserglycin [Source:HGNC Symbol;Acc:HGNC:9361]3132.4690.2903Yes
10PIGVphosphatidylinositol glycan anchor biosynthesis class V [Source:HGNC Symbol;Acc:HGNC:26031]3232.4520.3134Yes
11CD36CD36 molecule [Source:HGNC Symbol;Acc:HGNC:1663]3422.4150.3359Yes
12PXNpaxillin [Source:HGNC Symbol;Acc:HGNC:9718]3802.3080.3568Yes
13ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]5881.8960.3692Yes
14DSTdystonin [Source:HGNC Symbol;Acc:HGNC:1090]7691.6210.3798Yes
15CPEB4cytoplasmic polyadenylation element binding protein 4 [Source:HGNC Symbol;Acc:HGNC:21747]8211.5740.3934Yes
16NCDNneurochondrin [Source:HGNC Symbol;Acc:HGNC:17597]8601.5430.4070Yes
17PHC2polyhomeotic homolog 2 [Source:HGNC Symbol;Acc:HGNC:3183]9521.4540.4184Yes
18IP6K2inositol hexakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:17313]10271.3940.4296Yes
19RGS3regulator of G protein signaling 3 [Source:HGNC Symbol;Acc:HGNC:9999]13061.1960.4334Yes
20SYNCRIPsynaptotagmin binding cytoplasmic RNA interacting protein [Source:HGNC Symbol;Acc:HGNC:16918]14511.1330.4403Yes
21BCL6BCL6 transcription repressor [Source:HGNC Symbol;Acc:HGNC:1001]15731.0760.4473Yes
22DOCK4dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:HGNC:19192]17960.9640.4504Yes
23NLKnemo like kinase [Source:HGNC Symbol;Acc:HGNC:29858]18160.9550.4590Yes
24ACBD3acyl-CoA binding domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15453]19160.9240.4651Yes
25GRB2growth factor receptor bound protein 2 [Source:HGNC Symbol;Acc:HGNC:4566]22720.7930.4630Yes
26LOXlysyl oxidase [Source:HGNC Symbol;Acc:HGNC:6664]24240.7480.4661Yes
27VCPKMTvalosin containing protein lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:20352]24460.7420.4725Yes
28RBM3RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]25370.7090.4769Yes
29LARP4La ribonucleoprotein 4 [Source:HGNC Symbol;Acc:HGNC:24320]25480.7070.4833Yes
30CDKN1Acyclin dependent kinase inhibitor 1A [Source:HGNC Symbol;Acc:HGNC:1784]26910.6680.4858Yes
31RAB30RAB30, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9770]31830.5540.4778No
32DUSP10dual specificity phosphatase 10 [Source:HGNC Symbol;Acc:HGNC:3065]34300.5020.4759No
33AKAP3A-kinase anchoring protein 3 [Source:HGNC Symbol;Acc:HGNC:373]40740.3850.4622No
34DSTNdestrin, actin depolymerizing factor [Source:HGNC Symbol;Acc:HGNC:15750]41220.3740.4644No
35STK35serine/threonine kinase 35 [Source:HGNC Symbol;Acc:HGNC:16254]44090.3260.4598No
36RAB1BRAB1B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18370]45280.3070.4595No
37USP54ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]48000.2640.4547No
38CCDC126coiled-coil domain containing 126 [Source:HGNC Symbol;Acc:HGNC:22398]50500.2260.4501No
39CA5Bcarbonic anhydrase 5B [Source:HGNC Symbol;Acc:HGNC:1378]50930.2190.4511No
40MYH4myosin heavy chain 4 [Source:HGNC Symbol;Acc:HGNC:7574]51680.2080.4510No
41ADNPactivity dependent neuroprotector homeobox [Source:HGNC Symbol;Acc:HGNC:15766]53510.1800.4478No
42ST13ST13 Hsp70 interacting protein [Source:HGNC Symbol;Acc:HGNC:11343]53960.1730.4483No
43TRIM63tripartite motif containing 63 [Source:HGNC Symbol;Acc:HGNC:16007]54420.1680.4487No
44EEF1B2eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208]55550.1520.4471No
45FBXO9F-box protein 9 [Source:HGNC Symbol;Acc:HGNC:13588]55750.1490.4480No
46ZNF654zinc finger protein 654 [Source:HGNC Symbol;Acc:HGNC:25612]57550.1240.4443No
47PROX1prospero homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9459]60050.0930.4385No
48UBE2Bubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]63650.0460.4292No
49SCNN1Asodium channel epithelial 1 subunit alpha [Source:HGNC Symbol;Acc:HGNC:10599]65530.0210.4243No
50RWDD1RWD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20993]65870.0160.4236No
51FGF17fibroblast growth factor 17 [Source:HGNC Symbol;Acc:HGNC:3673]72280.0000.4063No
52EPHA7EPH receptor A7 [Source:HGNC Symbol;Acc:HGNC:3390]77540.0000.3921No
53C9orf131chromosome 9 open reading frame 131 [Source:HGNC Symbol;Acc:HGNC:31418]78560.0000.3893No
54CD101CD101 molecule [Source:HGNC Symbol;Acc:HGNC:5949]81320.0000.3819No
55WT1-ASWT1 antisense RNA [Source:HGNC Symbol;Acc:HGNC:18135]84460.0000.3734No
56JPH1junctophilin 1 [Source:HGNC Symbol;Acc:HGNC:14201]87870.0000.3642No
57PRRX1paired related homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9142]88920.0000.3614No
58KCNH5potassium voltage-gated channel subfamily H member 5 [Source:HGNC Symbol;Acc:HGNC:6254]100370.0000.3304No
59KCNJ1potassium inwardly rectifying channel subfamily J member 1 [Source:HGNC Symbol;Acc:HGNC:6255]101000.0000.3288No
60ELF5E74 like ETS transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:3320]102430.0000.3249No
61NEDD4NEDD4 E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:7727]107290.0000.3118No
62RTL3retrotransposon Gag like 3 [Source:HGNC Symbol;Acc:HGNC:22997]107370.0000.3116No
63KCTD4potassium channel tetramerization domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23227]121500.0000.2734No
64PDZD9PDZ domain containing 9 [Source:HGNC Symbol;Acc:HGNC:28740]121670.0000.2730No
65LGI1leucine rich glioma inactivated 1 [Source:HGNC Symbol;Acc:HGNC:6572]122290.0000.2713No
66ADAMTSL1ADAMTS like 1 [Source:HGNC Symbol;Acc:HGNC:14632]128280.0000.2551No
67AMY2Aamylase alpha 2A [Source:HGNC Symbol;Acc:HGNC:477]136350.0000.2333No
68ZP3zona pellucida glycoprotein 3 [Source:HGNC Symbol;Acc:HGNC:13189]149350.0000.1982No
69SH2D1ASH2 domain containing 1A [Source:HGNC Symbol;Acc:HGNC:10820]160070.0000.1692No
70BDNFbrain derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:1033]162940.0000.1615No
71TIMD4T cell immunoglobulin and mucin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25132]163320.0000.1605No
72DLX2distal-less homeobox 2 [Source:HGNC Symbol;Acc:HGNC:2915]168440.0000.1466No
73TECTAtectorin alpha [Source:HGNC Symbol;Acc:HGNC:11720]178600.0000.1192No
74SEMA3Asemaphorin 3A [Source:HGNC Symbol;Acc:HGNC:10723]178860.0000.1185No
75OTX2orthodenticle homeobox 2 [Source:HGNC Symbol;Acc:HGNC:8522]194020.0000.0775No
76OTPorthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]197730.0000.0675No
77GABRA6gamma-aminobutyric acid type A receptor subunit alpha6 [Source:HGNC Symbol;Acc:HGNC:4080]199480.0000.0628No
78KRTAP11-1keratin associated protein 11-1 [Source:HGNC Symbol;Acc:HGNC:18922]201360.0000.0577No
79KRT20keratin 20 [Source:HGNC Symbol;Acc:HGNC:20412]219460.0000.0088No
80ZNF395zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]224160.000-0.0039No
81CD52CD52 molecule [Source:HGNC Symbol;Acc:HGNC:1804]230340.000-0.0206No
82CPB1carboxypeptidase B1 [Source:HGNC Symbol;Acc:HGNC:2299]235330.000-0.0341No
83LAMA4laminin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6484]237760.000-0.0406No
84ARHGAP6Rho GTPase activating protein 6 [Source:HGNC Symbol;Acc:HGNC:676]241080.000-0.0496No
85WNT8BWnt family member 8B [Source:HGNC Symbol;Acc:HGNC:12789]241340.000-0.0503No
86KCNK10potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]242760.000-0.0541No
87NCKAP5NCK associated protein 5 [Source:HGNC Symbol;Acc:HGNC:29847]244800.000-0.0596No
88WNT4Wnt family member 4 [Source:HGNC Symbol;Acc:HGNC:12783]251500.000-0.0777No
89SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]255120.000-0.0875No
90LRRTM3leucine rich repeat transmembrane neuronal 3 [Source:HGNC Symbol;Acc:HGNC:19410]257010.000-0.0925No
91FIGNfidgetin, microtubule severing factor [Source:HGNC Symbol;Acc:HGNC:13285]260910.000-0.1031No
92SOX5SRY-box transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:11201]261660.000-0.1051No
93MIR7-3HGMIR7-3 host gene [Source:HGNC Symbol;Acc:HGNC:30049]264850.000-0.1137No
94XPNPEP3X-prolyl aminopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:28052]27597-0.014-0.1436No
95DOLPP1dolichyldiphosphatase 1 [Source:HGNC Symbol;Acc:HGNC:29565]27949-0.056-0.1526No
96LUC7L3LUC7 like 3 pre-mRNA splicing factor [Source:HGNC Symbol;Acc:HGNC:24309]28511-0.121-0.1666No
97SREK1splicing regulatory glutamic acid and lysine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:17882]28744-0.149-0.1715No
98FRA10AC1FRA10A associated CGG repeat 1 [Source:HGNC Symbol;Acc:HGNC:1162]28812-0.156-0.1718No
99NDST2N-deacetylase and N-sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:7681]29385-0.226-0.1851No
100EPG5ectopic P-granules autophagy protein 5 homolog [Source:HGNC Symbol;Acc:HGNC:29331]30389-0.353-0.2089No
101NSD1nuclear receptor binding SET domain protein 1 [Source:HGNC Symbol;Acc:HGNC:14234]30451-0.360-0.2071No
102IKZF2IKAROS family zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:13177]30657-0.390-0.2090No
103RELCHRAB11 binding and LisH domain, coiled-coil and HEAT repeat containing [Source:HGNC Symbol;Acc:HGNC:29289]30755-0.404-0.2078No
104NIPBLNIPBL cohesin loading factor [Source:HGNC Symbol;Acc:HGNC:28862]30766-0.406-0.2042No
105ELMO1engulfment and cell motility 1 [Source:HGNC Symbol;Acc:HGNC:16286]30801-0.410-0.2012No
106MPC2mitochondrial pyruvate carrier 2 [Source:HGNC Symbol;Acc:HGNC:24515]30887-0.425-0.1995No
107FSTL5follistatin like 5 [Source:HGNC Symbol;Acc:HGNC:21386]31075-0.451-0.2002No
108MPZmyelin protein zero [Source:HGNC Symbol;Acc:HGNC:7225]31469-0.516-0.2060No
109ADCY6adenylate cyclase 6 [Source:HGNC Symbol;Acc:HGNC:237]31828-0.580-0.2101No
110ATF7IPactivating transcription factor 7 interacting protein [Source:HGNC Symbol;Acc:HGNC:20092]32217-0.658-0.2144No
111NDUFS1NADH:ubiquinone oxidoreductase core subunit S1 [Source:HGNC Symbol;Acc:HGNC:7707]32407-0.695-0.2129No
112KLHL5kelch like family member 5 [Source:HGNC Symbol;Acc:HGNC:6356]32423-0.699-0.2066No
113KHDRBS1KH RNA binding domain containing, signal transduction associated 1 [Source:HGNC Symbol;Acc:HGNC:18116]32473-0.710-0.2012No
114RNF38ring finger protein 38 [Source:HGNC Symbol;Acc:HGNC:18052]32567-0.726-0.1968No
115RANBP9RAN binding protein 9 [Source:HGNC Symbol;Acc:HGNC:13727]32691-0.757-0.1930No
116FESFES proto-oncogene, tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3657]33005-0.832-0.1935No
117EIF4ENIF1eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:HGNC Symbol;Acc:HGNC:16687]33326-0.920-0.1934No
118OTX1orthodenticle homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8521]33598-0.996-0.1913No
119OPN3opsin 3 [Source:HGNC Symbol;Acc:HGNC:14007]33645-1.014-0.1829No
120TBL1XR1TBL1X receptor 1 [Source:HGNC Symbol;Acc:HGNC:29529]33668-1.023-0.1738No
121ZMYND8zinc finger MYND-type containing 8 [Source:HGNC Symbol;Acc:HGNC:9397]33686-1.028-0.1645No
122SDC1syndecan 1 [Source:HGNC Symbol;Acc:HGNC:10658]33876-1.087-0.1593No
123TNS2tensin 2 [Source:HGNC Symbol;Acc:HGNC:19737]33912-1.099-0.1498No
124SLC7A8solute carrier family 7 member 8 [Source:HGNC Symbol;Acc:HGNC:11066]33928-1.105-0.1397No
125ITGA6integrin subunit alpha 6 [Source:HGNC Symbol;Acc:HGNC:6142]34043-1.144-0.1319No
126DLG3discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]34181-1.189-0.1243No
127UVRAGUV radiation resistance associated [Source:HGNC Symbol;Acc:HGNC:12640]34818-1.443-0.1278No
128ZNF277zinc finger protein 277 [Source:HGNC Symbol;Acc:HGNC:13070]35186-1.605-0.1224No
129REREarginine-glutamic acid dipeptide repeats [Source:HGNC Symbol;Acc:HGNC:9965]35819-1.989-0.1206No
130SPTBN1spectrin beta, non-erythrocytic 1 [Source:HGNC Symbol;Acc:HGNC:11275]35963-2.099-0.1045No
131PYGMglycogen phosphorylase, muscle associated [Source:HGNC Symbol;Acc:HGNC:9726]36217-2.332-0.0892No
132MBPmyelin basic protein [Source:HGNC Symbol;Acc:HGNC:6925]36354-2.464-0.0695No
133ZFHX4zinc finger homeobox 4 [Source:HGNC Symbol;Acc:HGNC:30939]36358-2.466-0.0461No
134HAUS4HAUS augmin like complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:20163]36819-3.245-0.0277No
135PACS1phosphofurin acidic cluster sorting protein 1 [Source:HGNC Symbol;Acc:HGNC:30032]36954-3.6850.0037No
Table: GSEA details [plain text format]



Fig 2: PR_02   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: PR_02: Random ES distribution   
Gene set null distribution of ES for PR_02