Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #KO_GAQ_versus_KO_NA.greenbergcls.cls #KO_GAQ_versus_KO_NA_repos |
| Phenotype | greenbergcls.cls#KO_GAQ_versus_KO_NA_repos |
| Upregulated in class | KO_GAQ |
| GeneSet | GNF2_CDH11 |
| Enrichment Score (ES) | 0.7616104 |
| Normalized Enrichment Score (NES) | 1.5063417 |
| Nominal p-value | 0.04761905 |
| FDR q-value | 0.2592849 |
| FWER p-Value | 0.925 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | SERPINE1 | serpin family E member 1 [Source:HGNC Symbol;Acc:HGNC:8583] | 402 | 2.272 | 0.2160 | Yes |
| 2 | LAMC1 | laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492] | 676 | 1.753 | 0.3836 | Yes |
| 3 | GFPT2 | glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242] | 1010 | 1.406 | 0.5150 | Yes |
| 4 | PXDN | peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966] | 1471 | 1.125 | 0.6149 | Yes |
| 5 | FBN1 | fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603] | 2219 | 0.814 | 0.6760 | Yes |
| 6 | CALU | calumenin [Source:HGNC Symbol;Acc:HGNC:1458] | 3060 | 0.578 | 0.7111 | Yes |
| 7 | RAI14 | retinoic acid induced 14 [Source:HGNC Symbol;Acc:HGNC:14873] | 3214 | 0.548 | 0.7616 | Yes |
| 8 | FKBP9 | FKBP prolyl isomerase 9 [Source:HGNC Symbol;Acc:HGNC:3725] | 10375 | 0.000 | 0.5684 | No |
| 9 | PTX3 | pentraxin 3 [Source:HGNC Symbol;Acc:HGNC:9692] | 12551 | 0.000 | 0.5098 | No |
| 10 | COL1A1 | collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197] | 13081 | 0.000 | 0.4955 | No |
| 11 | COL6A2 | collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212] | 18719 | 0.000 | 0.3434 | No |
| 12 | COL6A1 | collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211] | 18720 | 0.000 | 0.3434 | No |
| 13 | COL3A1 | collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201] | 19604 | 0.000 | 0.3196 | No |
| 14 | LOXL1 | lysyl oxidase like 1 [Source:HGNC Symbol;Acc:HGNC:6665] | 19775 | 0.000 | 0.3150 | No |
| 15 | LOXL2 | lysyl oxidase like 2 [Source:HGNC Symbol;Acc:HGNC:6666] | 19776 | 0.000 | 0.3150 | No |
| 16 | COL5A1 | collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209] | 20327 | 0.000 | 0.3002 | No |
| 17 | COL5A2 | collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210] | 20328 | 0.000 | 0.3002 | No |
| 18 | FSTL1 | follistatin like 1 [Source:HGNC Symbol;Acc:HGNC:3972] | 21370 | 0.000 | 0.2721 | No |
| 19 | THBS2 | thrombospondin 2 [Source:HGNC Symbol;Acc:HGNC:11786] | 22748 | 0.000 | 0.2349 | No |
| 20 | LAMB1 | laminin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6486] | 23785 | 0.000 | 0.2070 | No |
| 21 | SRPX | sushi repeat containing protein X-linked [Source:HGNC Symbol;Acc:HGNC:11309] | 26861 | 0.000 | 0.1240 | No |
| 22 | COL1A2 | collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198] | 29516 | -0.243 | 0.0766 | No |
| 23 | FN1 | fibronectin 1 [Source:HGNC Symbol;Acc:HGNC:3778] | 29713 | -0.269 | 0.0982 | No |
| 24 | SERPINH1 | serpin family H member 1 [Source:HGNC Symbol;Acc:HGNC:1546] | 30509 | -0.369 | 0.1136 | No |
| 25 | CDH11 | cadherin 11 [Source:HGNC Symbol;Acc:HGNC:1750] | 32142 | -0.640 | 0.1335 | No |
