Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_GAQ_versus_KO_NA.greenbergcls.cls
#KO_GAQ_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetGNF2_MCM4
Enrichment Score (ES)-0.8634569
Normalized Enrichment Score (NES)-1.703146
Nominal p-value0.0
FDR q-value4.914854E-4
FWER p-Value0.004
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_MCM4   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]15221.100-0.0302No
2PA2G4proliferation-associated 2G4 [Source:HGNC Symbol;Acc:HGNC:8550]16001.066-0.0218No
3ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]261850.000-0.6855No
4TCP1t-complex 1 [Source:HGNC Symbol;Acc:HGNC:11655]28303-0.096-0.7417No
5FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]32050-0.618-0.8368No
6LMNB1lamin B1 [Source:HGNC Symbol;Acc:HGNC:6637]32873-0.802-0.8510No
7TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]33018-0.836-0.8467No
8AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]33435-0.948-0.8486No
9RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]33988-1.124-0.8524Yes
10PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]34299-1.231-0.8486Yes
11MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]34678-1.382-0.8451Yes
12SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]34692-1.386-0.8318Yes
13MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34760-1.422-0.8195Yes
14CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]34948-1.490-0.8099Yes
15MAD2L1mitotic arrest deficient 2 like 1 [Source:HGNC Symbol;Acc:HGNC:6763]35065-1.544-0.7978Yes
16FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]35150-1.587-0.7843Yes
17CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]35283-1.667-0.7714Yes
18GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]35385-1.715-0.7572Yes
19NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]35440-1.743-0.7415Yes
20UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]35447-1.747-0.7244Yes
21ESPL1extra spindle pole bodies like 1, separase [Source:HGNC Symbol;Acc:HGNC:16856]35469-1.759-0.7076Yes
22KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]35559-1.810-0.6921Yes
23PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]35608-1.839-0.6752Yes
24HELLShelicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]35644-1.871-0.6577Yes
25ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]35653-1.875-0.6394Yes
26BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]35704-1.908-0.6219Yes
27RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35769-1.949-0.6044Yes
28HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]35808-1.979-0.5859Yes
29KIF14kinesin family member 14 [Source:HGNC Symbol;Acc:HGNC:19181]35855-2.012-0.5672Yes
30MCM5minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]35939-2.080-0.5489Yes
31KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]35949-2.088-0.5286Yes
32TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35971-2.105-0.5083Yes
33CENPMcentromere protein M [Source:HGNC Symbol;Acc:HGNC:18352]35994-2.128-0.4879Yes
34RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]36061-2.182-0.4681Yes
35RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36065-2.187-0.4466Yes
36TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36102-2.226-0.4256Yes
37MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]36147-2.266-0.4044Yes
38CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36291-2.397-0.3846Yes
39GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]36323-2.430-0.3614Yes
40MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36336-2.447-0.3376Yes
41AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36338-2.450-0.3134Yes
42BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36341-2.453-0.2893Yes
43CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36418-2.536-0.2663Yes
44RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36429-2.546-0.2414Yes
45MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]36468-2.596-0.2168Yes
46NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36492-2.640-0.1913Yes
47FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36641-2.835-0.1673Yes
48PAICSphosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase [Source:HGNC Symbol;Acc:HGNC:8587]36657-2.858-0.1395Yes
49MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36694-2.936-0.1115Yes
50RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]36707-2.964-0.0825Yes
51POLD1DNA polymerase delta 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9175]36708-2.969-0.0532Yes
52ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36716-2.984-0.0239Yes
53GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]36895-3.4420.0053Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_MCM4   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_MCM4: Random ES distribution   
Gene set null distribution of ES for GNF2_MCM4