Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_GAQ_versus_KO_NA.greenbergcls.cls
#KO_GAQ_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetCSR_EARLY_UP.V1_UP
Enrichment Score (ES)0.52303386
Normalized Enrichment Score (NES)1.4113939
Nominal p-value0.0
FDR q-value0.06471764
FWER p-Value0.184
Table: GSEA Results Summary



Fig 1: Enrichment plot: CSR_EARLY_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]34.9340.0319Yes
2ID3inhibitor of DNA binding 3, HLH protein [Source:HGNC Symbol;Acc:HGNC:5362]713.8700.0551Yes
3SMAD7SMAD family member 7 [Source:HGNC Symbol;Acc:HGNC:6773]1303.3120.0750Yes
4ITPRIPL2ITPRIP like 2 [Source:HGNC Symbol;Acc:HGNC:27257]2132.8640.0914Yes
5MAP2K3mitogen-activated protein kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6843]2622.6470.1072Yes
6PNPpurine nucleoside phosphorylase [Source:HGNC Symbol;Acc:HGNC:7892]3162.4650.1218Yes
7KPNA4karyopherin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6397]3592.3690.1360Yes
8YWHAGtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma [Source:HGNC Symbol;Acc:HGNC:12852]3762.3190.1506Yes
9PXNpaxillin [Source:HGNC Symbol;Acc:HGNC:9718]3802.3080.1654Yes
10RIPK2receptor interacting serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:10020]4352.1770.1781Yes
11TLNRD1talin rod domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13519]4542.1420.1915Yes
12RRP9ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]4662.1110.2049Yes
13CRISPLD2cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]5661.9380.2147Yes
14NIP7nucleolar pre-rRNA processing protein NIP7 [Source:HGNC Symbol;Acc:HGNC:24328]5751.9220.2270Yes
15ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]5881.8960.2389Yes
16USP12ubiquitin specific peptidase 12 [Source:HGNC Symbol;Acc:HGNC:20485]6551.7820.2487Yes
17PTPN12protein tyrosine phosphatase non-receptor type 12 [Source:HGNC Symbol;Acc:HGNC:9645]7301.6810.2576Yes
18PUM3pumilio RNA binding family member 3 [Source:HGNC Symbol;Acc:HGNC:29676]7981.5990.2661Yes
19C21orf91chromosome 21 open reading frame 91 [Source:HGNC Symbol;Acc:HGNC:16459]8251.5690.2756Yes
20ACTR3actin related protein 3 [Source:HGNC Symbol;Acc:HGNC:170]8511.5480.2849Yes
21NOP16NOP16 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:26934]8561.5440.2948Yes
22ADRM1adhesion regulating molecule 1 [Source:HGNC Symbol;Acc:HGNC:15759]9081.4990.3032Yes
23GTPBP4GTP binding protein 4 [Source:HGNC Symbol;Acc:HGNC:21535]9281.4770.3122Yes
24TRMT10CtRNA methyltransferase 10C, mitochondrial RNase P subunit [Source:HGNC Symbol;Acc:HGNC:26022]9371.4660.3215Yes
25ELLelongation factor for RNA polymerase II [Source:HGNC Symbol;Acc:HGNC:23114]9551.4530.3305Yes
26DNAJA1DnaJ heat shock protein family (Hsp40) member A1 [Source:HGNC Symbol;Acc:HGNC:5229]9921.4190.3387Yes
27CEMIP2cell migration inducing hyaluronidase 2 [Source:HGNC Symbol;Acc:HGNC:11869]10331.3880.3466Yes
28ELOAelongin A [Source:HGNC Symbol;Acc:HGNC:11620]10401.3830.3554Yes
29TENT4Aterminal nucleotidyltransferase 4A [Source:HGNC Symbol;Acc:HGNC:16705]10561.3690.3639Yes
30DKC1dyskerin pseudouridine synthase 1 [Source:HGNC Symbol;Acc:HGNC:2890]11601.2910.3694Yes
31ZNF800zinc finger protein 800 [Source:HGNC Symbol;Acc:HGNC:27267]11891.2640.3769Yes
32FJX1four-jointed box kinase 1 [Source:HGNC Symbol;Acc:HGNC:17166]11981.2560.3848Yes
33USP36ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]12461.2250.3914Yes
34EMC6ER membrane protein complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:28430]12501.2220.3993Yes
35AMMECR1LAMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]12981.2020.4058Yes
36BCAR3BCAR3 adaptor protein, NSP family member [Source:HGNC Symbol;Acc:HGNC:973]13641.1740.4116Yes
37TOP1DNA topoisomerase I [Source:HGNC Symbol;Acc:HGNC:11986]14271.1450.4174Yes
38TDGthymine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:11700]14291.1430.4248Yes
39PPIFpeptidylprolyl isomerase F [Source:HGNC Symbol;Acc:HGNC:9259]15211.1000.4294Yes
40ST3GAL1ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10862]15301.0970.4363Yes
41SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]15351.0950.4433Yes
42LRRC8Aleucine rich repeat containing 8 VRAC subunit A [Source:HGNC Symbol;Acc:HGNC:19027]16701.0260.4463Yes
43UBE2Nubiquitin conjugating enzyme E2 N [Source:HGNC Symbol;Acc:HGNC:12492]17240.9950.4513Yes
44DNTTIP2deoxynucleotidyltransferase terminal interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24013]17440.9870.4572Yes
45BRPF1bromodomain and PHD finger containing 1 [Source:HGNC Symbol;Acc:HGNC:14255]17800.9710.4626Yes
46DHX33DEAH-box helicase 33 [Source:HGNC Symbol;Acc:HGNC:16718]18230.9520.4676Yes
47PTPN1protein tyrosine phosphatase non-receptor type 1 [Source:HGNC Symbol;Acc:HGNC:9642]18430.9460.4732Yes
48NMD3NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]21610.8320.4700Yes
49ELOCelongin C [Source:HGNC Symbol;Acc:HGNC:11617]23440.7710.4701Yes
50DDX21DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]23890.7590.4738Yes
51MAPRE1microtubule associated protein RP/EB family member 1 [Source:HGNC Symbol;Acc:HGNC:6890]23980.7560.4785Yes
52HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]24650.7320.4815Yes
53TIMM23translocase of inner mitochondrial membrane 23 [Source:HGNC Symbol;Acc:HGNC:17312]24890.7250.4855Yes
54C8orf76chromosome 8 open reading frame 76 [Source:HGNC Symbol;Acc:HGNC:25924]25930.6920.4872Yes
55FRMD6FERM domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19839]26080.6890.4913Yes
56MOB1BMOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]26190.6860.4955Yes
57TNFRSF12ATNF receptor superfamily member 12A [Source:HGNC Symbol;Acc:HGNC:18152]26780.6710.4983Yes
58DOT1LDOT1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:24948]27780.6460.4998Yes
59SLC30A1solute carrier family 30 member 1 [Source:HGNC Symbol;Acc:HGNC:11012]28320.6340.5024Yes
60RNPS1RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]30360.5810.5007Yes
61PCSK7proprotein convertase subtilisin/kexin type 7 [Source:HGNC Symbol;Acc:HGNC:8748]30570.5780.5039Yes
62SEC24ASEC24 homolog A, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10703]31290.5660.5057Yes
63GNL2G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]32370.5430.5063Yes
64DIS3DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]32390.5420.5098Yes
65AMD1adenosylmethionine decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:457]32490.5400.5130Yes
66SCHIP1schwannomin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:15678]32580.5380.5163Yes
67MSANTD3Myb/SANT DNA binding domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23370]33420.5190.5174Yes
68NCLnucleolin [Source:HGNC Symbol;Acc:HGNC:7667]33430.5190.5208Yes
69CBFBcore-binding factor subunit beta [Source:HGNC Symbol;Acc:HGNC:1539]34770.4940.5204Yes
70HMGA1high mobility group AT-hook 1 [Source:HGNC Symbol;Acc:HGNC:5010]36000.4710.5201Yes
71ILF2interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]36060.4710.5230Yes
72BDKRB1bradykinin receptor B1 [Source:HGNC Symbol;Acc:HGNC:1029]38430.4290.5194No
73NUP54nucleoporin 54 [Source:HGNC Symbol;Acc:HGNC:17359]39400.4090.5195No
74EIF4A1eukaryotic translation initiation factor 4A1 [Source:HGNC Symbol;Acc:HGNC:3282]39560.4050.5217No
75INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]40220.3930.5225No
76NIFKnucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]43510.3370.5158No
77YOD1YOD1 deubiquitinase [Source:HGNC Symbol;Acc:HGNC:25035]43590.3360.5178No
78IL11interleukin 11 [Source:HGNC Symbol;Acc:HGNC:5966]43890.3300.5191No
79CCDC59coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]44650.3190.5192No
80CHUKcomponent of inhibitor of nuclear factor kappa B kinase complex [Source:HGNC Symbol;Acc:HGNC:1974]47320.2750.5137No
81SLC28A1solute carrier family 28 member 1 [Source:HGNC Symbol;Acc:HGNC:11001]50730.2230.5060No
82RGMBrepulsive guidance molecule BMP co-receptor b [Source:HGNC Symbol;Acc:HGNC:26896]52600.1950.5022No
83RFKriboflavin kinase [Source:HGNC Symbol;Acc:HGNC:30324]53480.1810.5010No
84VTA1vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]54820.1620.4985No
85HECTD2HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]54980.1590.4991No
86PTP4A1protein tyrosine phosphatase 4A1 [Source:HGNC Symbol;Acc:HGNC:9634]55730.1490.4981No
87GATA2GATA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4171]56360.1400.4973No
88SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]57000.1320.4964No
89ATG101autophagy related 101 [Source:HGNC Symbol;Acc:HGNC:25679]57600.1230.4956No
90EIF4A3eukaryotic translation initiation factor 4A3 [Source:HGNC Symbol;Acc:HGNC:18683]57760.1210.4960No
91TIMM22translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]60940.0810.4880No
92ZNF697zinc finger protein 697 [Source:HGNC Symbol;Acc:HGNC:32034]62620.0590.4838No
93CD274CD274 molecule [Source:HGNC Symbol;Acc:HGNC:17635]62770.0580.4838No
94SPRY4sprouty RTK signaling antagonist 4 [Source:HGNC Symbol;Acc:HGNC:15533]63000.0550.4836No
95TFGtrafficking from ER to golgi regulator [Source:HGNC Symbol;Acc:HGNC:11758]66650.0020.4737No
96DCBLD1discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]123150.0000.3208No
97DDIT4LDNA damage inducible transcript 4 like [Source:HGNC Symbol;Acc:HGNC:30555]135980.0000.2861No
98TMEM200Atransmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]164280.0000.2095No
99DLX2distal-less homeobox 2 [Source:HGNC Symbol;Acc:HGNC:2915]168440.0000.1983No
100GALgalanin and GMAP prepropeptide [Source:HGNC Symbol;Acc:HGNC:4114]169610.0000.1951No
101TBX2T-box transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11597]197000.0000.1210No
102CD33CD33 molecule [Source:HGNC Symbol;Acc:HGNC:1659]230330.0000.0308No
103FOXD1forkhead box D1 [Source:HGNC Symbol;Acc:HGNC:3802]236910.0000.0130No
104PLAURplasminogen activator, urokinase receptor [Source:HGNC Symbol;Acc:HGNC:9053]257070.000-0.0415No
105PLCH1phospholipase C eta 1 [Source:HGNC Symbol;Acc:HGNC:29185]260610.000-0.0511No
106SOX9SRY-box transcription factor 9 [Source:HGNC Symbol;Acc:HGNC:11204]261620.000-0.0538No
107STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]28009-0.063-0.1033No
108DSPdesmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]28588-0.129-0.1182No
109HPCAL1hippocalcin like 1 [Source:HGNC Symbol;Acc:HGNC:5145]28731-0.147-0.1211No
110PHF20L1PHD finger protein 20 like 1 [Source:HGNC Symbol;Acc:HGNC:24280]28914-0.168-0.1249No
111CSRNP2cysteine and serine rich nuclear protein 2 [Source:HGNC Symbol;Acc:HGNC:16006]28995-0.178-0.1259No
112SNAI1snail family transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:11128]29078-0.191-0.1269No
113SLC16A1solute carrier family 16 member 1 [Source:HGNC Symbol;Acc:HGNC:10922]29283-0.215-0.1310No
114POM121POM121 transmembrane nucleoporin [Source:HGNC Symbol;Acc:HGNC:19702]29512-0.242-0.1356No
115PHLPP2PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]29750-0.274-0.1403No
116F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]29759-0.275-0.1387No
117SREK1IP1SREK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26716]29797-0.280-0.1379No
118MYO9Bmyosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]30097-0.317-0.1439No
119IRAK1interleukin 1 receptor associated kinase 1 [Source:HGNC Symbol;Acc:HGNC:6112]30168-0.327-0.1437No
120B3GNT6UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:24141]30287-0.341-0.1447No
121VGLL4vestigial like family member 4 [Source:HGNC Symbol;Acc:HGNC:28966]30678-0.392-0.1527No
122NT5E5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021]30795-0.410-0.1532No
123THAP12THAP domain containing 12 [Source:HGNC Symbol;Acc:HGNC:9440]31080-0.452-0.1579No
124ZPBPzona pellucida binding protein [Source:HGNC Symbol;Acc:HGNC:15662]31604-0.539-0.1686No
125SRP72signal recognition particle 72 [Source:HGNC Symbol;Acc:HGNC:11303]31631-0.546-0.1658No
126UTP3UTP3 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24477]31939-0.596-0.1702No
127POLE3DNA polymerase epsilon 3, accessory subunit [Source:HGNC Symbol;Acc:HGNC:13546]32070-0.625-0.1697No
128ELK3ETS transcription factor ELK3 [Source:HGNC Symbol;Acc:HGNC:3325]32931-0.815-0.1877No
129TXNDC12thioredoxin domain containing 12 [Source:HGNC Symbol;Acc:HGNC:24626]33239-0.897-0.1902No
130CTPS1CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]33365-0.930-0.1876No
131EHD4EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]33429-0.947-0.1831No
132RESTRE1 silencing transcription factor [Source:HGNC Symbol;Acc:HGNC:9966]33511-0.971-0.1790No
133GABPB2GA binding protein transcription factor subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:28441]33698-1.030-0.1774No
134KLF13Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672]33714-1.040-0.1711No
135ZNF324zinc finger protein 324 [Source:HGNC Symbol;Acc:HGNC:14096]33922-1.102-0.1695No
136UAP1UDP-N-acetylglucosamine pyrophosphorylase 1 [Source:HGNC Symbol;Acc:HGNC:12457]34102-1.163-0.1668No
137PHLDB1pleckstrin homology like domain family B member 1 [Source:HGNC Symbol;Acc:HGNC:23697]34584-1.347-0.1711No
138ZBTB2zinc finger and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20868]34921-1.481-0.1706No
139FZD8frizzled class receptor 8 [Source:HGNC Symbol;Acc:HGNC:4046]35035-1.531-0.1638No
140SMTNsmoothelin [Source:HGNC Symbol;Acc:HGNC:11126]35197-1.615-0.1577No
141NET1neuroepithelial cell transforming 1 [Source:HGNC Symbol;Acc:HGNC:14592]35359-1.704-0.1510No
142PANX1pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]35384-1.715-0.1405No
143HLXH2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]35486-1.769-0.1318No
144NRIP1nuclear receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8001]35509-1.778-0.1209No
145UGDHUDP-glucose 6-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:12525]35540-1.802-0.1100No
146MRPS35mitochondrial ribosomal protein S35 [Source:HGNC Symbol;Acc:HGNC:16635]36516-2.667-0.1191No
147FAM107Bfamily with sequence similarity 107 member B [Source:HGNC Symbol;Acc:HGNC:23726]36676-2.891-0.1047No
148ZBTB12zinc finger and BTB domain containing 12 [Source:HGNC Symbol;Acc:HGNC:19066]36917-3.514-0.0884No
149SHBSH2 domain containing adaptor protein B [Source:HGNC Symbol;Acc:HGNC:10838]36918-3.517-0.0656No
150SLC37A4solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]36922-3.530-0.0428No
151BCAR1BCAR1 scaffold protein, Cas family member [Source:HGNC Symbol;Acc:HGNC:971]36935-3.592-0.0199No
152KLF10Kruppel like factor 10 [Source:HGNC Symbol;Acc:HGNC:11810]36962-3.7150.0035No
Table: GSEA details [plain text format]



Fig 2: CSR_EARLY_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CSR_EARLY_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for CSR_EARLY_UP.V1_UP