Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_GAQ_versus_KO_NA.greenbergcls.cls
#KO_GAQ_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetKRAS.BREAST_UP.V1_UP
Enrichment Score (ES)0.44565806
Normalized Enrichment Score (NES)1.1975597
Nominal p-value0.047169812
FDR q-value0.18211702
FWER p-Value0.753
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.BREAST_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1Binterleukin 1 beta [Source:HGNC Symbol;Acc:HGNC:5992]04.9900.0806Yes
2TRAF1TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]993.5410.1352Yes
3GLRXglutaredoxin [Source:HGNC Symbol;Acc:HGNC:4330]1383.2440.1865Yes
4TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]2572.6680.2264Yes
5LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]2842.5780.2674Yes
6MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]3652.3470.3031Yes
7DHRS9dehydrogenase/reductase 9 [Source:HGNC Symbol;Acc:HGNC:16888]4052.2580.3385Yes
8IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]5072.0360.3687Yes
9IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]5491.9700.3994Yes
10IL2RGinterleukin 2 receptor subunit gamma [Source:HGNC Symbol;Acc:HGNC:6010]11801.2760.4030Yes
11FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]12881.2090.4196Yes
12SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]15351.0950.4306Yes
13SYPsynaptophysin [Source:HGNC Symbol;Acc:HGNC:11506]19670.9040.4336Yes
14PRDM1PR/SET domain 1 [Source:HGNC Symbol;Acc:HGNC:9346]22430.8020.4391Yes
15ACP3acid phosphatase 3 [Source:HGNC Symbol;Acc:HGNC:125]27630.6500.4355Yes
16CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]27750.6460.4457Yes
17AKAP12A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]33490.5180.4385No
18TAGLN3transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]39740.4010.4281No
19CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]44110.3260.4216No
20DNAJA4DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]51150.2160.4060No
21KCNJ14potassium inwardly rectifying channel subfamily J member 14 [Source:HGNC Symbol;Acc:HGNC:6260]51450.2110.4087No
22TAPT1transmembrane anterior posterior transformation 1 [Source:HGNC Symbol;Acc:HGNC:26887]52300.1990.4096No
23MKRN3makorin ring finger protein 3 [Source:HGNC Symbol;Acc:HGNC:7114]53470.1810.4094No
24TLR8toll like receptor 8 [Source:HGNC Symbol;Acc:HGNC:15632]62610.0590.3856No
25BAIAP3BAI1 associated protein 3 [Source:HGNC Symbol;Acc:HGNC:948]62870.0580.3859No
26CCL16C-C motif chemokine ligand 16 [Source:HGNC Symbol;Acc:HGNC:10614]67350.0000.3738No
27CCL22C-C motif chemokine ligand 22 [Source:HGNC Symbol;Acc:HGNC:10621]67420.0000.3736No
28SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]68840.0000.3698No
29DEFB4Adefensin beta 4A [Source:HGNC Symbol;Acc:HGNC:2767]75040.0000.3531No
30ADAMDEC1ADAM like decysin 1 [Source:HGNC Symbol;Acc:HGNC:16299]75250.0000.3525No
31MAPK4mitogen-activated protein kinase 4 [Source:HGNC Symbol;Acc:HGNC:6878]87440.0000.3196No
32OPRPNopiorphin prepropeptide [Source:HGNC Symbol;Acc:HGNC:17279]87740.0000.3188No
33CYB5R2cytochrome b5 reductase 2 [Source:HGNC Symbol;Acc:HGNC:24376]87790.0000.3187No
34PRRX1paired related homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9142]88920.0000.3156No
35CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]90470.0000.3115No
36SOX17SRY-box transcription factor 17 [Source:HGNC Symbol;Acc:HGNC:18122]90690.0000.3109No
37CLSTN2calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]91550.0000.3086No
38CDK2AP2P3cyclin dependent kinase 2 associated protein 2 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:38494]99650.0000.2867No
39KCNA2potassium voltage-gated channel subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:6220]99840.0000.2862No
40NPAS1neuronal PAS domain protein 1 [Source:HGNC Symbol;Acc:HGNC:7894]100590.0000.2842No
41KCNK3potassium two pore domain channel subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:6278]101110.0000.2828No
42FAM30Afamily with sequence similarity 30 member A [Source:HGNC Symbol;Acc:HGNC:19955]101440.0000.2820No
43SPRR2Bsmall proline rich protein 2B [Source:HGNC Symbol;Acc:HGNC:11262]104500.0000.2737No
44IL1RAPL1interleukin 1 receptor accessory protein like 1 [Source:HGNC Symbol;Acc:HGNC:5996]106670.0000.2679No
45ERC2-IT1ERC2 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:1229]106980.0000.2671No
46KLK12kallikrein related peptidase 12 [Source:HGNC Symbol;Acc:HGNC:6360]107260.0000.2663No
47KCNA10potassium voltage-gated channel subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:6219]110640.0000.2572No
48PPBPpro-platelet basic protein [Source:HGNC Symbol;Acc:HGNC:9240]112120.0000.2532No
49ACKR4atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]113280.0000.2501No
50GPR37L1G protein-coupled receptor 37 like 1 [Source:HGNC Symbol;Acc:HGNC:14923]114360.0000.2472No
51PRB4proline rich protein BstNI subfamily 4 [Source:HGNC Symbol;Acc:HGNC:9340]116770.0000.2407No
52USH2Ausherin [Source:HGNC Symbol;Acc:HGNC:12601]117130.0000.2398No
53TMPRSS4transmembrane serine protease 4 [Source:HGNC Symbol;Acc:HGNC:11878]117690.0000.2383No
54CLPScolipase [Source:HGNC Symbol;Acc:HGNC:2085]119050.0000.2346No
55IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]119930.0000.2323No
56PSCAprostate stem cell antigen [Source:HGNC Symbol;Acc:HGNC:9500]120090.0000.2319No
57CMA1chymase 1 [Source:HGNC Symbol;Acc:HGNC:2097]120300.0000.2313No
58ESM1endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]121040.0000.2294No
59ETV2ETS variant transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:3491]125200.0000.2181No
60IGF2insulin like growth factor 2 [Source:HGNC Symbol;Acc:HGNC:5466]126730.0000.2140No
61TAAR5trace amine associated receptor 5 [Source:HGNC Symbol;Acc:HGNC:30236]128070.0000.2104No
62GULP1GULP PTB domain containing engulfment adaptor 1 [Source:HGNC Symbol;Acc:HGNC:18649]133380.0000.1961No
63OR2C1olfactory receptor family 2 subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:8242]136580.0000.1874No
64IL37interleukin 37 [Source:HGNC Symbol;Acc:HGNC:15563]140120.0000.1779No
65EFNA5ephrin A5 [Source:HGNC Symbol;Acc:HGNC:3225]144850.0000.1651No
66HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]145640.0000.1630No
67ZP4zona pellucida glycoprotein 4 [Source:HGNC Symbol;Acc:HGNC:15770]149380.0000.1529No
68IL17RBinterleukin 17 receptor B [Source:HGNC Symbol;Acc:HGNC:18015]152210.0000.1453No
69SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]155690.0000.1359No
70GJA8gap junction protein alpha 8 [Source:HGNC Symbol;Acc:HGNC:4281]156370.0000.1341No
71IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]159930.0000.1245No
72AMELYamelogenin Y-linked [Source:HGNC Symbol;Acc:HGNC:462]160920.0000.1218No
73MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]172060.0000.0917No
74CEACAM3CEA cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:1815]179120.0000.0726No
75SPON2spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]189410.0000.0448No
76COL9A1collagen type IX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2217]189680.0000.0441No
77BMP6bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073]190570.0000.0417No
78NRLneural retina leucine zipper [Source:HGNC Symbol;Acc:HGNC:8002]193610.0000.0335No
79HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]197530.0000.0229No
80GABRA3gamma-aminobutyric acid type A receptor subunit alpha3 [Source:HGNC Symbol;Acc:HGNC:4077]199510.0000.0176No
81NR1H4nuclear receptor subfamily 1 group H member 4 [Source:HGNC Symbol;Acc:HGNC:7967]199520.0000.0176No
82KLK6kallikrein related peptidase 6 [Source:HGNC Symbol;Acc:HGNC:6367]206430.000-0.0011No
83MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]208660.000-0.0071No
84KRT34keratin 34 [Source:HGNC Symbol;Acc:HGNC:6452]219570.000-0.0366No
85CRCT1cysteine rich C-terminal 1 [Source:HGNC Symbol;Acc:HGNC:29875]221610.000-0.0421No
86RMSTrhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]222440.000-0.0443No
87CMKLR1chemerin chemokine-like receptor 1 [Source:HGNC Symbol;Acc:HGNC:2121]224070.000-0.0487No
88KRT33Bkeratin 33B [Source:HGNC Symbol;Acc:HGNC:6451]226530.000-0.0553No
89RBMY2FPRNA binding motif protein Y-linked family 2 member F, pseudogene [Source:HGNC Symbol;Acc:HGNC:23891]229440.000-0.0631No
90ANKRD36BP2ankyrin repeat domain 36B pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:33607]230750.000-0.0667No
91NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]237200.000-0.0841No
92KCNJ16potassium inwardly rectifying channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]239230.000-0.0896No
93SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]241990.000-0.0970No
94SPACA1sperm acrosome associated 1 [Source:HGNC Symbol;Acc:HGNC:14967]242150.000-0.0974No
95KCNK15potassium two pore domain channel subfamily K member 15 [Source:HGNC Symbol;Acc:HGNC:13814]242780.000-0.0991No
96ALPPalkaline phosphatase, placental [Source:HGNC Symbol;Acc:HGNC:439]243950.000-0.1022No
97FAM155Bfamily with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]244710.000-0.1043No
98ADGRD2adhesion G protein-coupled receptor D2 [Source:HGNC Symbol;Acc:HGNC:18651]244740.000-0.1043No
99CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]245550.000-0.1065No
100WNT16Wnt family member 16 [Source:HGNC Symbol;Acc:HGNC:16267]248500.000-0.1144No
101ANO2anoctamin 2 [Source:HGNC Symbol;Acc:HGNC:1183]251090.000-0.1214No
102SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]255120.000-0.1323No
103OCA2OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]260860.000-0.1478No
104A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]270100.000-0.1728No
105FMO2flavin containing dimethylaniline monoxygenase 2 [Source:HGNC Symbol;Acc:HGNC:3770]271660.000-0.1770No
106BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]27655-0.021-0.1898No
107TFPItissue factor pathway inhibitor [Source:HGNC Symbol;Acc:HGNC:11760]27741-0.031-0.1916No
108ATP12AATPase H+/K+ transporting non-gastric alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:13816]27926-0.054-0.1957No
109HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]27943-0.056-0.1953No
110STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]28009-0.063-0.1960No
111PDE3Bphosphodiesterase 3B [Source:HGNC Symbol;Acc:HGNC:8779]28041-0.066-0.1958No
112STX1Asyntaxin 1A [Source:HGNC Symbol;Acc:HGNC:11433]28127-0.076-0.1968No
113PCDHGA11protocadherin gamma subfamily A, 11 [Source:HGNC Symbol;Acc:HGNC:8698]28488-0.117-0.2047No
114PPP1R15Aprotein phosphatase 1 regulatory subunit 15A [Source:HGNC Symbol;Acc:HGNC:14375]28792-0.154-0.2104No
115GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]28817-0.156-0.2085No
116NDUFA4L2NDUFA4 mitochondrial complex associated like 2 [Source:HGNC Symbol;Acc:HGNC:29836]29726-0.271-0.2288No
117CFAP43cilia and flagella associated protein 43 [Source:HGNC Symbol;Acc:HGNC:26684]29870-0.291-0.2279No
118COL9A3collagen type IX alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2219]30131-0.321-0.2298No
119SAMD14sterile alpha motif domain containing 14 [Source:HGNC Symbol;Acc:HGNC:27312]30347-0.348-0.2300No
120CDSNcorneodesmosin [Source:HGNC Symbol;Acc:HGNC:1802]30589-0.379-0.2304No
121CASS4Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]30615-0.384-0.2248No
122CTNNA2catenin alpha 2 [Source:HGNC Symbol;Acc:HGNC:2510]31087-0.452-0.2303No
123NFE2nuclear factor, erythroid 2 [Source:HGNC Symbol;Acc:HGNC:7780]31656-0.550-0.2368No
124OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]32513-0.716-0.2484No
125CEACAM1CEA cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:1814]32621-0.739-0.2393No
126KCNC2potassium voltage-gated channel subfamily C member 2 [Source:HGNC Symbol;Acc:HGNC:6234]32812-0.786-0.2318No
127LILRA6leukocyte immunoglobulin like receptor A6 [Source:HGNC Symbol;Acc:HGNC:15495]32976-0.824-0.2229No
128TERTtelomerase reverse transcriptase [Source:HGNC Symbol;Acc:HGNC:11730]33094-0.857-0.2122No
129TMEM176Atransmembrane protein 176A [Source:HGNC Symbol;Acc:HGNC:24930]33153-0.871-0.1997No
130KCNAB3potassium voltage-gated channel subfamily A regulatory beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:6230]33391-0.938-0.1910No
131S100A5S100 calcium binding protein A5 [Source:HGNC Symbol;Acc:HGNC:10495]33655-1.017-0.1817No
132SCELsciellin [Source:HGNC Symbol;Acc:HGNC:10573]34938-1.485-0.1924No
133PDE2Aphosphodiesterase 2A [Source:HGNC Symbol;Acc:HGNC:8777]35210-1.621-0.1735No
134H2AC13H2A clustered histone 13 [Source:HGNC Symbol;Acc:HGNC:4725]35250-1.646-0.1480No
135GSG1germ cell associated 1 [Source:HGNC Symbol;Acc:HGNC:19716]35494-1.773-0.1259No
136MYCNMYCN proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7559]36243-2.353-0.1082No
137LYL1LYL1 basic helix-loop-helix family member [Source:HGNC Symbol;Acc:HGNC:6734]36281-2.386-0.0706No
138KIF24kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]36367-2.473-0.0330No
139KIF5Akinesin family member 5A [Source:HGNC Symbol;Acc:HGNC:6323]36822-3.2500.0073No
Table: GSEA details [plain text format]



Fig 2: KRAS.BREAST_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.BREAST_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.BREAST_UP.V1_UP