Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_GAQ_versus_KO_NA.greenbergcls.cls
#KO_GAQ_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetKRAS.LUNG.BREAST_UP.V1_UP
Enrichment Score (ES)0.55478483
Normalized Enrichment Score (NES)1.491019
Nominal p-value0.0
FDR q-value0.04412511
FWER p-Value0.093
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.LUNG.BREAST_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]34.9340.0642Yes
2CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]44.9300.1284Yes
3TRAF1TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]993.5410.1719Yes
4GLRXglutaredoxin [Source:HGNC Symbol;Acc:HGNC:4330]1383.2440.2131Yes
5POLMDNA polymerase mu [Source:HGNC Symbol;Acc:HGNC:9185]2092.8820.2488Yes
6TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]2572.6680.2822Yes
7ID2inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]2692.6250.3161Yes
8ISG20interferon stimulated exonuclease gene 20 [Source:HGNC Symbol;Acc:HGNC:6130]2772.5970.3498Yes
9LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]2842.5780.3832Yes
10MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]3652.3470.4116Yes
11DHRS9dehydrogenase/reductase 9 [Source:HGNC Symbol;Acc:HGNC:16888]4052.2580.4399Yes
12IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]5072.0360.4637Yes
13IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]5491.9700.4882Yes
14ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]5881.8960.5119Yes
15FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]12881.2090.5087Yes
16SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]15351.0950.5163Yes
17DOCK4dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:HGNC:19192]17960.9640.5218Yes
18GPR4G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:4497]21970.8220.5217Yes
19PRDM1PR/SET domain 1 [Source:HGNC Symbol;Acc:HGNC:9346]22430.8020.5310Yes
20HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]24650.7320.5345Yes
21TNFSF15TNF superfamily member 15 [Source:HGNC Symbol;Acc:HGNC:11931]26740.6720.5376Yes
22CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]27750.6460.5433Yes
23SH2D2ASH2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:10821]32360.5430.5380Yes
24ADAM8ADAM metallopeptidase domain 8 [Source:HGNC Symbol;Acc:HGNC:215]35140.4880.5368Yes
25OSBP2oxysterol binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8504]36160.4690.5402Yes
26NDOR1NADPH dependent diflavin oxidoreductase 1 [Source:HGNC Symbol;Acc:HGNC:29838]39310.4110.5370Yes
27TAGLN3transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]39740.4010.5411Yes
28IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]40060.3960.5455Yes
29INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]40220.3930.5502Yes
30RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]41190.3740.5524Yes
31SNAP91synaptosome associated protein 91 [Source:HGNC Symbol;Acc:HGNC:14986]42210.3570.5544Yes
32CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]44110.3260.5535Yes
33CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]45130.3100.5548Yes
34KCNJ14potassium inwardly rectifying channel subfamily J member 14 [Source:HGNC Symbol;Acc:HGNC:6260]51450.2110.5405No
35MKRN3makorin ring finger protein 3 [Source:HGNC Symbol;Acc:HGNC:7114]53470.1810.5374No
36MYH2myosin heavy chain 2 [Source:HGNC Symbol;Acc:HGNC:7572]58970.1070.5239No
37CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]60780.0830.5201No
38ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]64840.0280.5095No
39SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]68840.0000.4987No
40RNASE1ribonuclease A family member 1, pancreatic [Source:HGNC Symbol;Acc:HGNC:10044]75560.0000.4806No
41SLCO5A1solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]75760.0000.4801No
42CD247CD247 molecule [Source:HGNC Symbol;Acc:HGNC:1677]84110.0000.4575No
43SHOXshort stature homeobox [Source:HGNC Symbol;Acc:HGNC:10853]84630.0000.4561No
44CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]90470.0000.4403No
45CLSTN2calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]91550.0000.4374No
46ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]101960.0000.4093No
47FAM174Bfamily with sequence similarity 174 member B [Source:HGNC Symbol;Acc:HGNC:34339]107400.0000.3946No
48PPBPpro-platelet basic protein [Source:HGNC Symbol;Acc:HGNC:9240]112120.0000.3818No
49TFDP3transcription factor Dp family member 3 [Source:HGNC Symbol;Acc:HGNC:24603]114160.0000.3763No
50TSPAN1tetraspanin 1 [Source:HGNC Symbol;Acc:HGNC:20657]117430.0000.3675No
51CLPScolipase [Source:HGNC Symbol;Acc:HGNC:2085]119050.0000.3632No
52IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]119930.0000.3608No
53ESM1endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]121040.0000.3578No
54TAAR5trace amine associated receptor 5 [Source:HGNC Symbol;Acc:HGNC:30236]128070.0000.3388No
55GBA3glucosylceramidase beta 3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:19069]129090.0000.3361No
56RBMXL2RBMX like 2 [Source:HGNC Symbol;Acc:HGNC:17886]131720.0000.3290No
57GULP1GULP PTB domain containing engulfment adaptor 1 [Source:HGNC Symbol;Acc:HGNC:18649]133380.0000.3245No
58HOXD11homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]134090.0000.3227No
59OR2B6olfactory receptor family 2 subfamily B member 6 [Source:HGNC Symbol;Acc:HGNC:8241]136630.0000.3158No
60KIAA1549LKIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]138720.0000.3102No
61RELNreelin [Source:HGNC Symbol;Acc:HGNC:9957]139970.0000.3068No
62IL37interleukin 37 [Source:HGNC Symbol;Acc:HGNC:15563]140120.0000.3064No
63RETNresistin [Source:HGNC Symbol;Acc:HGNC:20389]141100.0000.3038No
64HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]145640.0000.2916No
65ZP4zona pellucida glycoprotein 4 [Source:HGNC Symbol;Acc:HGNC:15770]149380.0000.2815No
66SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]155690.0000.2644No
67IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]159930.0000.2530No
68AMELYamelogenin Y-linked [Source:HGNC Symbol;Acc:HGNC:462]160920.0000.2503No
69MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]172060.0000.2202No
70GRPgastrin releasing peptide [Source:HGNC Symbol;Acc:HGNC:4605]172080.0000.2202No
71SEMA3Bsemaphorin 3B [Source:HGNC Symbol;Acc:HGNC:10724]178870.0000.2018No
72CEACAM3CEA cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:1815]179120.0000.2012No
73IGHV3-48immunoglobulin heavy variable 3-48 [Source:HGNC Symbol;Acc:HGNC:5606]182480.0000.1921No
74BMP6bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073]190570.0000.1702No
75MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]190870.0000.1694No
76NRLneural retina leucine zipper [Source:HGNC Symbol;Acc:HGNC:8002]193610.0000.1621No
77CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]194240.0000.1604No
78CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]194330.0000.1602No
79TBX3T-box transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11602]196990.0000.1530No
80HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]197530.0000.1516No
81GABRA3gamma-aminobutyric acid type A receptor subunit alpha3 [Source:HGNC Symbol;Acc:HGNC:4077]199510.0000.1462No
82NR1H4nuclear receptor subfamily 1 group H member 4 [Source:HGNC Symbol;Acc:HGNC:7967]199520.0000.1462No
83PRLprolactin [Source:HGNC Symbol;Acc:HGNC:9445]200830.0000.1427No
84PRYPTPN13 like Y-linked [Source:HGNC Symbol;Acc:HGNC:14024]200900.0000.1425No
85MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]208660.0000.1216No
86KRT34keratin 34 [Source:HGNC Symbol;Acc:HGNC:6452]219570.0000.0921No
87CRCT1cysteine rich C-terminal 1 [Source:HGNC Symbol;Acc:HGNC:29875]221610.0000.0866No
88RMSTrhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]222440.0000.0844No
89NAV3neuron navigator 3 [Source:HGNC Symbol;Acc:HGNC:15998]223700.0000.0810No
90CMKLR1chemerin chemokine-like receptor 1 [Source:HGNC Symbol;Acc:HGNC:2121]224070.0000.0800No
91CD1ACD1a molecule [Source:HGNC Symbol;Acc:HGNC:1634]229910.0000.0642No
92NELL2neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]236420.0000.0466No
93SLC25A31solute carrier family 25 member 31 [Source:HGNC Symbol;Acc:HGNC:25319]236430.0000.0466No
94NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]237200.0000.0446No
95TSPY1testis specific protein Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:12381]238220.0000.0418No
96SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]241990.0000.0317No
97KCNK15potassium two pore domain channel subfamily K member 15 [Source:HGNC Symbol;Acc:HGNC:13814]242780.0000.0296No
98DNAH9dynein axonemal heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:2953]244500.0000.0249No
99FAM155Bfamily with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]244710.0000.0244No
100CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]245550.0000.0221No
101IFNA8interferon alpha 8 [Source:HGNC Symbol;Acc:HGNC:5429]247360.0000.0173No
102CHRNA2cholinergic receptor nicotinic alpha 2 subunit [Source:HGNC Symbol;Acc:HGNC:1956]248150.0000.0152No
103PTPRRprotein tyrosine phosphatase receptor type R [Source:HGNC Symbol;Acc:HGNC:9680]250870.0000.0078No
104TTC22tetratricopeptide repeat domain 22 [Source:HGNC Symbol;Acc:HGNC:26067]253130.0000.0017No
105PRSS3serine protease 3 [Source:HGNC Symbol;Acc:HGNC:9486]253810.000-0.0001No
106SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]255120.000-0.0036No
107PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]256090.000-0.0062No
108FNDC8fibronectin type III domain containing 8 [Source:HGNC Symbol;Acc:HGNC:25286]258810.000-0.0135No
109ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]264590.000-0.0291No
110A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]270100.000-0.0440No
111BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]27655-0.021-0.0612No
112HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]27943-0.056-0.0682No
113STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]28009-0.063-0.0692No
114CCR6C-C motif chemokine receptor 6 [Source:HGNC Symbol;Acc:HGNC:1607]28056-0.067-0.0695No
115ADAMTS6ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]28581-0.128-0.0820No
116GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]28817-0.156-0.0864No
117G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]29220-0.206-0.0946No
118CD37CD37 molecule [Source:HGNC Symbol;Acc:HGNC:1666]29258-0.212-0.0928No
119LAT2linker for activation of T cells family member 2 [Source:HGNC Symbol;Acc:HGNC:12749]29451-0.235-0.0949No
120RBP4retinol binding protein 4 [Source:HGNC Symbol;Acc:HGNC:9922]29484-0.239-0.0927No
121ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]29509-0.241-0.0902No
122HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]29924-0.298-0.0975No
123AKT2AKT serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:392]30417-0.357-0.1062No
124CDSNcorneodesmosin [Source:HGNC Symbol;Acc:HGNC:1802]30589-0.379-0.1059No
125RPS4Y1ribosomal protein S4 Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:10425]30785-0.409-0.1058No
126CTNNA2catenin alpha 2 [Source:HGNC Symbol;Acc:HGNC:2510]31087-0.452-0.1081No
127GYPCglycophorin C (Gerbich blood group) [Source:HGNC Symbol;Acc:HGNC:4704]31742-0.566-0.1184No
128ATG10autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]32226-0.660-0.1229No
129OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]32513-0.716-0.1213No
130KCNC2potassium voltage-gated channel subfamily C member 2 [Source:HGNC Symbol;Acc:HGNC:6234]32812-0.786-0.1191No
131LILRA6leukocyte immunoglobulin like receptor A6 [Source:HGNC Symbol;Acc:HGNC:15495]32976-0.824-0.1128No
132TERTtelomerase reverse transcriptase [Source:HGNC Symbol;Acc:HGNC:11730]33094-0.857-0.1048No
133LDB3LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710]33353-0.927-0.0997No
134ITPKAinositol-trisphosphate 3-kinase A [Source:HGNC Symbol;Acc:HGNC:6178]33771-1.055-0.0973No
135KIF5Ckinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]33925-1.104-0.0871No
136PDE2Aphosphodiesterase 2A [Source:HGNC Symbol;Acc:HGNC:8777]35210-1.621-0.1007No
137ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]35503-1.776-0.0855No
138KCNC1potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]35515-1.781-0.0626No
139SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]35723-1.921-0.0432No
140CCDC181coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]36683-2.902-0.0313No
141KIF5Akinesin family member 5A [Source:HGNC Symbol;Acc:HGNC:6323]36822-3.2500.0073No
Table: GSEA details [plain text format]



Fig 2: KRAS.LUNG.BREAST_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.LUNG.BREAST_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.LUNG.BREAST_UP.V1_UP