Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_GAQ_versus_KO_NA.greenbergcls.cls
#KO_GAQ_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetP53_DN.V2_UP
Enrichment Score (ES)0.47380093
Normalized Enrichment Score (NES)1.2640922
Nominal p-value0.02173913
FDR q-value0.1210035
FWER p-Value0.539
Table: GSEA Results Summary



Fig 1: Enrichment plot: P53_DN.V2_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1RNinterleukin 1 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:6000]24.9340.0563Yes
2CCL4C-C motif chemokine ligand 4 [Source:HGNC Symbol;Acc:HGNC:10630]134.7310.1100Yes
3CLCF1cardiotrophin like cytokine factor 1 [Source:HGNC Symbol;Acc:HGNC:17412]683.9190.1533Yes
4CD83CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703]803.7160.1955Yes
5OSGIN2oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]1003.5390.2354Yes
6IER3immediate early response 3 [Source:HGNC Symbol;Acc:HGNC:5392]1143.4360.2743Yes
7NFKBIANFKB inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:7797]1263.3260.3120Yes
8FOSL2FOS like 2, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3798]2392.7310.3401Yes
9TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]2572.6680.3701Yes
10P2RY6pyrimidinergic receptor P2Y6 [Source:HGNC Symbol;Acc:HGNC:8543]4612.1170.3888Yes
11IKZF1IKAROS family zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:13176]7711.6200.3989Yes
12PTK2Bprotein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]8591.5430.4142Yes
13SYN1synapsin I [Source:HGNC Symbol;Acc:HGNC:11494]10841.3420.4235Yes
14HAO1hydroxyacid oxidase 1 [Source:HGNC Symbol;Acc:HGNC:4809]12341.2330.4335Yes
15MMP13matrix metallopeptidase 13 [Source:HGNC Symbol;Acc:HGNC:7159]12531.2220.4470Yes
16EVI2Aecotropic viral integration site 2A [Source:HGNC Symbol;Acc:HGNC:3499]12631.2180.4606Yes
17FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]12881.2090.4738Yes
18NCKAP1LNCK associated protein 1 like [Source:HGNC Symbol;Acc:HGNC:4862]27290.6580.4423No
19CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]27750.6460.4485No
20MT1Gmetallothionein 1G [Source:HGNC Symbol;Acc:HGNC:7399]39010.4170.4228No
21ME3malic enzyme 3 [Source:HGNC Symbol;Acc:HGNC:6985]40160.3940.4242No
22TUBB1tubulin beta 1 class VI [Source:HGNC Symbol;Acc:HGNC:16257]42760.3480.4212No
23CH25Hcholesterol 25-hydroxylase [Source:HGNC Symbol;Acc:HGNC:1907]43240.3410.4238No
24SDC4syndecan 4 [Source:HGNC Symbol;Acc:HGNC:10661]44700.3180.4235No
25PRKCEprotein kinase C epsilon [Source:HGNC Symbol;Acc:HGNC:9401]44980.3130.4264No
26CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]45130.3100.4295No
27IL36Ainterleukin 36 alpha [Source:HGNC Symbol;Acc:HGNC:15562]51380.2120.4151No
28RNF39ring finger protein 39 [Source:HGNC Symbol;Acc:HGNC:18064]59080.1050.3954No
29MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]59300.1030.3961No
30ANGPTL3angiopoietin like 3 [Source:HGNC Symbol;Acc:HGNC:491]59560.1010.3965No
31CEACAM5CEA cell adhesion molecule 5 [Source:HGNC Symbol;Acc:HGNC:1817]60690.0850.3945No
32CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]60780.0830.3952No
33CD5LCD5 molecule like [Source:HGNC Symbol;Acc:HGNC:1690]61610.0710.3938No
34SLC4A10solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]61630.0710.3946No
35RORCRAR related orphan receptor C [Source:HGNC Symbol;Acc:HGNC:10260]61680.0710.3953No
36CYP2C8cytochrome P450 family 2 subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:2622]61990.0700.3953No
37GP5glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]62490.0610.3947No
38GUCY2Dguanylate cyclase 2D, retinal [Source:HGNC Symbol;Acc:HGNC:4689]62690.0590.3948No
39FGF22fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]72250.0000.3690No
40PRDM11PR/SET domain 11 [Source:HGNC Symbol;Acc:HGNC:13996]72690.0000.3678No
41PPEF1protein phosphatase with EF-hand domain 1 [Source:HGNC Symbol;Acc:HGNC:9243]73240.0000.3663No
42C4BPAcomplement component 4 binding protein alpha [Source:HGNC Symbol;Acc:HGNC:1325]75280.0000.3608No
43PKD2L1polycystin 2 like 1, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9011]81220.0000.3448No
44PCDH1protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655]84020.0000.3372No
45GPA33glycoprotein A33 [Source:HGNC Symbol;Acc:HGNC:4445]88000.0000.3265No
46BARX2BARX homeobox 2 [Source:HGNC Symbol;Acc:HGNC:956]88800.0000.3243No
47CDH4cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]97350.0000.3012No
48TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]100710.0000.2922No
49KCNK3potassium two pore domain channel subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:6278]101110.0000.2911No
50ADAM12ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]101980.0000.2888No
51HS3ST2heparan sulfate-glucosamine 3-sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:5195]102680.0000.2869No
52APOL3apolipoprotein L3 [Source:HGNC Symbol;Acc:HGNC:14868]103420.0000.2849No
53GSC2goosecoid homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4613]104250.0000.2827No
54SPRR2Csmall proline rich protein 2C (pseudogene) [Source:HGNC Symbol;Acc:HGNC:11263]104510.0000.2820No
55SPRR1Bsmall proline rich protein 1B [Source:HGNC Symbol;Acc:HGNC:11260]104590.0000.2818No
56CYP2D6cytochrome P450 family 2 subfamily D member 6 [Source:HGNC Symbol;Acc:HGNC:2625]105780.0000.2787No
57IL1RAPL1interleukin 1 receptor accessory protein like 1 [Source:HGNC Symbol;Acc:HGNC:5996]106670.0000.2763No
58RFPL2ret finger protein like 2 [Source:HGNC Symbol;Acc:HGNC:9979]107830.0000.2732No
59NTRK3neurotrophic receptor tyrosine kinase 3 [Source:HGNC Symbol;Acc:HGNC:8033]111890.0000.2622No
60GYPBglycophorin B (MNS blood group) [Source:HGNC Symbol;Acc:HGNC:4703]120690.0000.2384No
61NTSR1neurotensin receptor 1 [Source:HGNC Symbol;Acc:HGNC:8039]120770.0000.2382No
62LGSNlengsin, lens protein with glutamine synthetase domain [Source:HGNC Symbol;Acc:HGNC:21016]123370.0000.2312No
63PTX3pentraxin 3 [Source:HGNC Symbol;Acc:HGNC:9692]125510.0000.2254No
64TNRtenascin R [Source:HGNC Symbol;Acc:HGNC:11953]128560.0000.2172No
65AVPR2arginine vasopressin receptor 2 [Source:HGNC Symbol;Acc:HGNC:897]128950.0000.2162No
66PCDHA6protocadherin alpha 6 [Source:HGNC Symbol;Acc:HGNC:8672]141400.0000.1825No
67ANXA10annexin A10 [Source:HGNC Symbol;Acc:HGNC:534]144780.0000.1734No
68TNNI3KTNNI3 interacting kinase [Source:HGNC Symbol;Acc:HGNC:19661]146290.0000.1693No
69SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]155690.0000.1439No
70SARDHsarcosine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:10536]156220.0000.1425No
71HTR1E5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]157030.0000.1403No
72BPIbactericidal permeability increasing protein [Source:HGNC Symbol;Acc:HGNC:1095]157260.0000.1397No
73CA3carbonic anhydrase 3 [Source:HGNC Symbol;Acc:HGNC:1374]158220.0000.1372No
74AMELXamelogenin X-linked [Source:HGNC Symbol;Acc:HGNC:461]160910.0000.1299No
75FPR3formyl peptide receptor 3 [Source:HGNC Symbol;Acc:HGNC:3828]161890.0000.1273No
76DLX6distal-less homeobox 6 [Source:HGNC Symbol;Acc:HGNC:2919]168480.0000.1095No
77SLC38A3solute carrier family 38 member 3 [Source:HGNC Symbol;Acc:HGNC:18044]176040.0000.0890No
78DPYSdihydropyrimidinase [Source:HGNC Symbol;Acc:HGNC:3013]180970.0000.0757No
79CHST8carbohydrate sulfotransferase 8 [Source:HGNC Symbol;Acc:HGNC:15993]181220.0000.0751No
80BFSP2beaded filament structural protein 2 [Source:HGNC Symbol;Acc:HGNC:1041]182140.0000.0726No
81CXCL12C-X-C motif chemokine ligand 12 [Source:HGNC Symbol;Acc:HGNC:10672]189070.0000.0539No
82MOGmyelin oligodendrocyte glycoprotein [Source:HGNC Symbol;Acc:HGNC:7197]189910.0000.0516No
83CXCL6C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643]194190.0000.0401No
84CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]194240.0000.0400No
85CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]194330.0000.0397No
86CYP17A1cytochrome P450 family 17 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2593]197510.0000.0312No
87CHRNA10cholinergic receptor nicotinic alpha 10 subunit [Source:HGNC Symbol;Acc:HGNC:13800]197540.0000.0311No
88PDCphosducin [Source:HGNC Symbol;Acc:HGNC:8759]199310.0000.0263No
89PYYpeptide YY [Source:HGNC Symbol;Acc:HGNC:9748]201260.0000.0211No
90RGRretinal G protein coupled receptor [Source:HGNC Symbol;Acc:HGNC:9990]204990.0000.0110No
91RHDRh blood group D antigen [Source:HGNC Symbol;Acc:HGNC:10009]205070.0000.0108No
92CACNG2calcium voltage-gated channel auxiliary subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:1406]206080.0000.0081No
93TPTEtransmembrane phosphatase with tensin homology [Source:HGNC Symbol;Acc:HGNC:12023]210300.000-0.0033No
94P2RY11purinergic receptor P2Y11 [Source:HGNC Symbol;Acc:HGNC:8540]213800.000-0.0127No
95SLC15A2solute carrier family 15 member 2 [Source:HGNC Symbol;Acc:HGNC:10921]218260.000-0.0248No
96INSL3insulin like 3 [Source:HGNC Symbol;Acc:HGNC:6086]218620.000-0.0257No
97INSL4insulin like 4 [Source:HGNC Symbol;Acc:HGNC:6087]218650.000-0.0258No
98KRT31keratin 31 [Source:HGNC Symbol;Acc:HGNC:6448]219590.000-0.0283No
99KRT14keratin 14 [Source:HGNC Symbol;Acc:HGNC:6416]220040.000-0.0295No
100H1-6H1.6 linker histone, cluster member [Source:HGNC Symbol;Acc:HGNC:4720]227820.000-0.0505No
101CTLA4cytotoxic T-lymphocyte associated protein 4 [Source:HGNC Symbol;Acc:HGNC:2505]227970.000-0.0509No
102CD69CD69 molecule [Source:HGNC Symbol;Acc:HGNC:1694]231040.000-0.0592No
103FOXL2forkhead box L2 [Source:HGNC Symbol;Acc:HGNC:1092]236090.000-0.0728No
104CYP2A13cytochrome P450 family 2 subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:2608]237000.000-0.0752No
105EVX1even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]237440.000-0.0764No
106LALBAlactalbumin alpha [Source:HGNC Symbol;Acc:HGNC:6480]240120.000-0.0836No
107WNT3Wnt family member 3 [Source:HGNC Symbol;Acc:HGNC:12782]251480.000-0.1144No
108PRTN3proteinase 3 [Source:HGNC Symbol;Acc:HGNC:9495]256820.000-0.1288No
109RIPK4receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]258050.000-0.1321No
110OR10H3olfactory receptor family 10 subfamily H member 3 [Source:HGNC Symbol;Acc:HGNC:8174]258140.000-0.1323No
111POU2AF1POU class 2 homeobox associating factor 1 [Source:HGNC Symbol;Acc:HGNC:9211]264800.000-0.1503No
112MAGEC2MAGE family member C2 [Source:HGNC Symbol;Acc:HGNC:13574]267400.000-0.1573No
113PF4V1platelet factor 4 variant 1 [Source:HGNC Symbol;Acc:HGNC:8862]271340.000-0.1680No
114XAF1XIAP associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30932]272770.000-0.1718No
115ATP12AATPase H+/K+ transporting non-gastric alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:13816]27926-0.054-0.1887No
116INPP5Dinositol polyphosphate-5-phosphatase D [Source:HGNC Symbol;Acc:HGNC:6079]28295-0.096-0.1976No
117KCNMB1potassium calcium-activated channel subfamily M regulatory beta subunit 1 [Source:HGNC Symbol;Acc:HGNC:6285]28438-0.112-0.2002No
118LRRC32leucine rich repeat containing 32 [Source:HGNC Symbol;Acc:HGNC:4161]28626-0.133-0.2037No
119H2AC4H2A clustered histone 4 [Source:HGNC Symbol;Acc:HGNC:4734]29088-0.192-0.2140No
120SLC16A4solute carrier family 16 member 4 [Source:HGNC Symbol;Acc:HGNC:10925]29169-0.202-0.2138No
121NF1neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]29848-0.288-0.2289No
122MMP17matrix metallopeptidase 17 [Source:HGNC Symbol;Acc:HGNC:7163]29864-0.289-0.2260No
123SLASrc like adaptor [Source:HGNC Symbol;Acc:HGNC:10902]30138-0.322-0.2297No
124CNOT9CCR4-NOT transcription complex subunit 9 [Source:HGNC Symbol;Acc:HGNC:10445]30833-0.416-0.2438No
125MPZmyelin protein zero [Source:HGNC Symbol;Acc:HGNC:7225]31469-0.516-0.2551No
126POU6F1POU class 6 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9224]31917-0.592-0.2604No
127TDRKHtudor and KH domain containing [Source:HGNC Symbol;Acc:HGNC:11713]31960-0.601-0.2547No
128ITM2Aintegral membrane protein 2A [Source:HGNC Symbol;Acc:HGNC:6173]32379-0.691-0.2581No
129OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]32513-0.716-0.2535No
130RELBRELB proto-oncogene, NF-kB subunit [Source:HGNC Symbol;Acc:HGNC:9956]33196-0.885-0.2619No
131PRRG3proline rich and Gla domain 3 [Source:HGNC Symbol;Acc:HGNC:30798]33218-0.891-0.2523No
132CLEC1AC-type lectin domain family 1 member A [Source:HGNC Symbol;Acc:HGNC:24355]33243-0.899-0.2426No
133BAXBCL2 associated X, apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:959]33251-0.902-0.2325No
134CD68CD68 molecule [Source:HGNC Symbol;Acc:HGNC:1693]33346-0.925-0.2245No
135PIDD1p53-induced death domain protein 1 [Source:HGNC Symbol;Acc:HGNC:16491]33443-0.951-0.2162No
136FZD9frizzled class receptor 9 [Source:HGNC Symbol;Acc:HGNC:4047]33664-1.021-0.2105No
137RFX2regulatory factor X2 [Source:HGNC Symbol;Acc:HGNC:9983]34348-1.251-0.2147No
138TP53tumor protein p53 [Source:HGNC Symbol;Acc:HGNC:11998]34573-1.344-0.2055No
139EML3EMAP like 3 [Source:HGNC Symbol;Acc:HGNC:26666]34766-1.425-0.1944No
140ETV5ETS variant transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:3494]35238-1.641-0.1884No
141H6PDhexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4795]35320-1.683-0.1714No
142ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]35503-1.776-0.1560No
143DPF1double PHD fingers 1 [Source:HGNC Symbol;Acc:HGNC:20225]35789-1.965-0.1413No
144GALK1galactokinase 1 [Source:HGNC Symbol;Acc:HGNC:4118]36403-2.522-0.1291No
145NFIXnuclear factor I X [Source:HGNC Symbol;Acc:HGNC:7788]36782-3.134-0.1035No
146TFAP4transcription factor AP-4 [Source:HGNC Symbol;Acc:HGNC:11745]36789-3.162-0.0676No
147RND2Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]36800-3.203-0.0313No
148ALOX5AParachidonate 5-lipoxygenase activating protein [Source:HGNC Symbol;Acc:HGNC:436]36889-3.4250.0054No
Table: GSEA details [plain text format]



Fig 2: P53_DN.V2_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: P53_DN.V2_UP: Random ES distribution   
Gene set null distribution of ES for P53_DN.V2_UP