Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_GAQ_versus_KO_NA.greenbergcls.cls
#KO_GAQ_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetDESCARTES_MAIN_FETAL_BIPOLAR_CELLS
Enrichment Score (ES)-0.7759114
Normalized Enrichment Score (NES)-1.6268488
Nominal p-value0.0
FDR q-value0.0012328005
FWER p-Value0.018
Table: GSEA Results Summary



Fig 1: Enrichment plot: DESCARTES_MAIN_FETAL_BIPOLAR_CELLS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GNL2P1G protein nucleolar 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:50779]28830.621-0.0486No
2CABP2calcium binding protein 2 [Source:HGNC Symbol;Acc:HGNC:1385]47930.265-0.0877No
3CYP2C8cytochrome P450 family 2 subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:2622]61990.070-0.1224No
4PRICKLE2prickle planar cell polarity protein 2 [Source:HGNC Symbol;Acc:HGNC:20340]71950.000-0.1493No
5LINC01291long intergenic non-protein coding RNA 1291 [Source:HGNC Symbol;Acc:HGNC:50358]74400.000-0.1559No
6C15orf32chromosome 15 putative open reading frame 32 [Source:HGNC Symbol;Acc:HGNC:26549]75230.000-0.1581No
7LACTBL1lactamase beta like 1 [Source:HGNC Symbol;Acc:HGNC:35445]77250.000-0.1635No
8ARSHarylsulfatase family member H [Source:HGNC Symbol;Acc:HGNC:32488]77770.000-0.1649No
9ASIC4acid sensing ion channel subunit family member 4 [Source:HGNC Symbol;Acc:HGNC:21263]82250.000-0.1770No
10WASF3-AS1WASF3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:39841]86050.000-0.1872No
11TDRD6tudor domain containing 6 [Source:HGNC Symbol;Acc:HGNC:21339]93760.000-0.2080No
12NRG1-IT3NRG1 intronic transcript 3 [Source:HGNC Symbol;Acc:HGNC:43635]94080.000-0.2089No
13NRG1-IT1NRG1 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:43633]94140.000-0.2090No
14CACNA2D4calcium voltage-gated channel auxiliary subunit alpha2delta 4 [Source:HGNC Symbol;Acc:HGNC:20202]94320.000-0.2095No
15GRIK1glutamate ionotropic receptor kainate type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4579]96020.000-0.2140No
16NFIBnuclear factor I B [Source:HGNC Symbol;Acc:HGNC:7785]103540.000-0.2343No
17GRIK1-AS1GRIK1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:16458]107270.000-0.2444No
18SERTM1serine rich and transmembrane domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33792]109020.000-0.2491No
19ELSPBP1epididymal sperm binding protein 1 [Source:HGNC Symbol;Acc:HGNC:14417]109410.000-0.2501No
20ACKR1atypical chemokine receptor 1 (Duffy blood group) [Source:HGNC Symbol;Acc:HGNC:4035]113310.000-0.2606No
21AC023136.1novel transcript113740.000-0.2618No
22NYAP2neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 [Source:HGNC Symbol;Acc:HGNC:29291]115860.000-0.2675No
23AP001150.1novel transcript, antisense to POU2F3123380.000-0.2877No
24MACROD2-IT1MACROD2 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:16201]130660.000-0.3074No
25GS1-279B7.1microtubule associated protein 1 light chain 3 beta pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:100288079]131110.000-0.3086No
26GLRA1glycine receptor alpha 1 [Source:HGNC Symbol;Acc:HGNC:4326]131250.000-0.3089No
27TMEM196transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431]133850.000-0.3159No
28TRMT9BtRNA methyltransferase 9B (putative) [Source:HGNC Symbol;Acc:HGNC:26725]134790.000-0.3184No
29LINC02224long intergenic non-protein coding RNA 2224 [Source:HGNC Symbol;Acc:HGNC:53093]139780.000-0.3319No
30TMEM215transmembrane protein 215 [Source:HGNC Symbol;Acc:HGNC:33816]141010.000-0.3352No
31ZNF804Bzinc finger protein 804B [Source:HGNC Symbol;Acc:HGNC:21958]141180.000-0.3356No
32TAFA4TAFA chemokine like family member 4 [Source:HGNC Symbol;Acc:HGNC:21591]143010.000-0.3405No
33VSX1visual system homeobox 1 [Source:HGNC Symbol;Acc:HGNC:12723]148120.000-0.3543No
34VSX2visual system homeobox 2 [Source:HGNC Symbol;Acc:HGNC:1975]148130.000-0.3543No
35SV2Bsynaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]158480.000-0.3823No
36RSF1-IT2RSF1 intronic transcript 2 [Source:HGNC Symbol;Acc:HGNC:41438]160460.000-0.3876No
37KRT8P15keratin 8 pseudogene 15 [Source:HGNC Symbol;Acc:HGNC:33367]164820.000-0.3993No
38FEZF2FEZ family zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:13506]186420.000-0.4577No
39CDH20cadherin 20 [Source:HGNC Symbol;Acc:HGNC:1760]186840.000-0.4588No
40LINC01896long intergenic non-protein coding RNA 1896 [Source:HGNC Symbol;Acc:HGNC:52715]196780.000-0.4856No
41AC005746.2novel transcript, antisense to BCAS3197100.000-0.4865No
42LINC01750long intergenic non-protein coding RNA 1750 [Source:HGNC Symbol;Acc:HGNC:52538]198370.000-0.4899No
43GABRB3gamma-aminobutyric acid type A receptor subunit beta3 [Source:HGNC Symbol;Acc:HGNC:4083]199030.000-0.4916No
44TRPC7transient receptor potential cation channel subfamily C member 7 [Source:HGNC Symbol;Acc:HGNC:20754]200180.000-0.4947No
45GABRR3gamma-aminobutyric acid type A receptor subunit rho3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:17969]200850.000-0.4965No
46GABRR1gamma-aminobutyric acid type A receptor subunit rho1 [Source:HGNC Symbol;Acc:HGNC:4090]200880.000-0.4965No
47LINC01933long intergenic non-protein coding RNA 1933 [Source:HGNC Symbol;Acc:HGNC:52756]204970.000-0.5076No
48RN7SL83PRNA, 7SL, cytoplasmic 83, pseudogene [Source:HGNC Symbol;Acc:HGNC:46099]206190.000-0.5108No
49TRPC7-AS2TRPC7 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:40937]213640.000-0.5309No
50MACROD2-AS1MACROD2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:37193]215350.000-0.5355No
51ZNF385Bzinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]216690.000-0.5391No
52CA10carbonic anhydrase 10 [Source:HGNC Symbol;Acc:HGNC:1369]219880.000-0.5477No
53TMEM132Etransmembrane protein 132E [Source:HGNC Symbol;Acc:HGNC:26991]225450.000-0.5627No
54MIR3671microRNA 3671 [Source:HGNC Symbol;Acc:HGNC:38925]226150.000-0.5646No
55DSCAM-IT1DSCAM intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41327]226670.000-0.5660No
56ZNF223zinc finger protein 223 [Source:HGNC Symbol;Acc:HGNC:13016]228210.000-0.5701No
57LHX4LIM homeobox 4 [Source:HGNC Symbol;Acc:HGNC:21734]232640.000-0.5821No
58RNU6-116PRNA, U6 small nuclear 116, pseudogene [Source:HGNC Symbol;Acc:HGNC:47079]238170.000-0.5970No
59NRG1neuregulin 1 [Source:HGNC Symbol;Acc:HGNC:7997]242160.000-0.6077No
60NCKAP5NCK associated protein 5 [Source:HGNC Symbol;Acc:HGNC:29847]244800.000-0.6148No
61LINC00469long intergenic non-protein coding RNA 469 [Source:HGNC Symbol;Acc:HGNC:26863]246840.000-0.6203No
62GUSBP4GUSB pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:18220]253220.000-0.6375No
63RN7SL754PRNA, 7SL, cytoplasmic 754, pseudogene [Source:HGNC Symbol;Acc:HGNC:46770]259310.000-0.6540No
64AC004835.1novel transcript269130.000-0.6805No
65BSPH1binder of sperm protein homolog 1 [Source:HGNC Symbol;Acc:HGNC:33906]271230.000-0.6861No
66MAP7microtubule associated protein 7 [Source:HGNC Symbol;Acc:HGNC:6869]274000.000-0.6936No
67DSCAMDS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]274640.000-0.6953No
68HSPA8P11heat shock protein family A (Hsp70) member 8 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:44926]28471-0.114-0.7171No
69MACROD2mono-ADP ribosylhydrolase 2 [Source:HGNC Symbol;Acc:HGNC:16126]30584-0.379-0.7563Yes
70AIMP1P1aminoacyl tRNA synthetase complex interacting multifunctional protein 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16543]30892-0.426-0.7445Yes
71FSTL5follistatin like 5 [Source:HGNC Symbol;Acc:HGNC:21386]31075-0.451-0.7282Yes
72ZPBPzona pellucida binding protein [Source:HGNC Symbol;Acc:HGNC:15662]31604-0.539-0.7170Yes
73FAM234Bfamily with sequence similarity 234 member B [Source:HGNC Symbol;Acc:HGNC:29288]33784-1.059-0.7260Yes
74LRRC1leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:14307]33932-1.106-0.6778Yes
75CADPScalcium dependent secretion activator [Source:HGNC Symbol;Acc:HGNC:1426]34123-1.172-0.6277Yes
76KCTD6potassium channel tetramerization domain containing 6 [Source:HGNC Symbol;Acc:HGNC:22235]34751-1.418-0.5778Yes
77B3GLCTbeta 3-glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:20207]35160-1.593-0.5138Yes
78GSG1germ cell associated 1 [Source:HGNC Symbol;Acc:HGNC:19716]35494-1.773-0.4392Yes
79C3orf70chromosome 3 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33731]35604-1.838-0.3555Yes
80CRYBG3crystallin beta-gamma domain containing 3 [Source:HGNC Symbol;Acc:HGNC:34427]36014-2.150-0.2652Yes
81HCN2hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 [Source:HGNC Symbol;Acc:HGNC:4846]36766-3.100-0.1394Yes
82AGAP1ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:16922]36785-3.1420.0082Yes
Table: GSEA details [plain text format]



Fig 2: DESCARTES_MAIN_FETAL_BIPOLAR_CELLS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: DESCARTES_MAIN_FETAL_BIPOLAR_CELLS: Random ES distribution   
Gene set null distribution of ES for DESCARTES_MAIN_FETAL_BIPOLAR_CELLS