Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_GAQ_versus_KO_NA.greenbergcls.cls
#KO_GAQ_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetHALLMARK_COAGULATION
Enrichment Score (ES)0.40001315
Normalized Enrichment Score (NES)1.0704713
Nominal p-value0.16666667
FDR q-value0.32530648
FWER p-Value0.761
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_COAGULATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1FURINfurin, paired basic amino acid cleaving enzyme [Source:HGNC Symbol;Acc:HGNC:8568]354.3220.0457Yes
2PDGFBplatelet derived growth factor subunit B [Source:HGNC Symbol;Acc:HGNC:8800]494.1180.0898Yes
3F9coagulation factor IX [Source:HGNC Symbol;Acc:HGNC:3551]1293.3150.1234Yes
4PLEKpleckstrin [Source:HGNC Symbol;Acc:HGNC:9070]2252.7890.1510Yes
5MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]3652.3470.1725Yes
6SERPINE1serpin family E member 1 [Source:HGNC Symbol;Acc:HGNC:8583]4022.2720.1961Yes
7WDR1WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]4062.2580.2204Yes
8GNG12G protein subunit gamma 12 [Source:HGNC Symbol;Acc:HGNC:19663]4372.1750.2430Yes
9SERPINB2serpin family B member 2 [Source:HGNC Symbol;Acc:HGNC:8584]5122.0280.2629Yes
10MAFFMAF bZIP transcription factor F [Source:HGNC Symbol;Acc:HGNC:6780]5441.9780.2835Yes
11MMP2matrix metallopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:7166]7491.6550.2958Yes
12GDAguanine deaminase [Source:HGNC Symbol;Acc:HGNC:4212]7551.6430.3134Yes
13MMP14matrix metallopeptidase 14 [Source:HGNC Symbol;Acc:HGNC:7160]7761.6170.3303Yes
14TIMP1TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]8191.5760.3462Yes
15CFBcomplement factor B [Source:HGNC Symbol;Acc:HGNC:1037]8881.5140.3607Yes
16ANXA1annexin A1 [Source:HGNC Symbol;Acc:HGNC:533]9131.4930.3761Yes
17CD9CD9 molecule [Source:HGNC Symbol;Acc:HGNC:1709]10761.3510.3863Yes
18SERPINC1serpin family C member 1 [Source:HGNC Symbol;Acc:HGNC:775]11941.2600.3968Yes
19FBN1fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603]22190.8140.3778Yes
20FYNFYN proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:4037]23830.7600.3816Yes
21KLF7Kruppel like factor 7 [Source:HGNC Symbol;Acc:HGNC:6350]24960.7230.3864Yes
22CTSVcathepsin V [Source:HGNC Symbol;Acc:HGNC:2538]27480.6530.3867Yes
23ITGB3integrin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6156]28010.6390.3922Yes
24THBS1thrombospondin 1 [Source:HGNC Symbol;Acc:HGNC:11785]28790.6220.3968Yes
25ADAM9ADAM metallopeptidase domain 9 [Source:HGNC Symbol;Acc:HGNC:216]30330.5820.3989Yes
26CPN1carboxypeptidase N subunit 1 [Source:HGNC Symbol;Acc:HGNC:2312]32450.5410.3991Yes
27PREPprolyl endopeptidase [Source:HGNC Symbol;Acc:HGNC:9358]34130.5060.4000Yes
28ITIH1inter-alpha-trypsin inhibitor heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:6166]36290.4670.3992No
29BMP1bone morphogenetic protein 1 [Source:HGNC Symbol;Acc:HGNC:1067]37900.4390.3996No
30F10coagulation factor X [Source:HGNC Symbol;Acc:HGNC:3528]41080.3770.3951No
31C2complement C2 [Source:HGNC Symbol;Acc:HGNC:1248]42200.3570.3960No
32RABIFRAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]42370.3540.3994No
33S100A13S100 calcium binding protein A13 [Source:HGNC Symbol;Acc:HGNC:10490]44380.3220.3974No
34ARF4ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]47030.2790.3933No
35APOA1apolipoprotein A1 [Source:HGNC Symbol;Acc:HGNC:600]49900.2340.3881No
36GNB2G protein subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:4398]51360.2120.3864No
37CTSKcathepsin K [Source:HGNC Symbol;Acc:HGNC:2536]53360.1830.3830No
38MMP8matrix metallopeptidase 8 [Source:HGNC Symbol;Acc:HGNC:7175]53390.1820.3849No
39RGNregucalcin [Source:HGNC Symbol;Acc:HGNC:9989]55240.1560.3817No
40MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]59300.1030.3718No
41SH2B2SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]60100.0910.3707No
42CLUclusterin [Source:HGNC Symbol;Acc:HGNC:2095]61800.0710.3669No
43THBDthrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784]62170.0650.3666No
44CTSHcathepsin H [Source:HGNC Symbol;Acc:HGNC:2535]66570.0030.3547No
45PLATplasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]101840.0000.2593No
46APOC3apolipoprotein C3 [Source:HGNC Symbol;Acc:HGNC:610]104090.0000.2533No
47APOC2apolipoprotein C2 [Source:HGNC Symbol;Acc:HGNC:609]104110.0000.2532No
48APOC1apolipoprotein C1 [Source:HGNC Symbol;Acc:HGNC:607]104120.0000.2532No
49F13Bcoagulation factor XIII B chain [Source:HGNC Symbol;Acc:HGNC:3534]111130.0000.2343No
50KLKB1kallikrein B1 [Source:HGNC Symbol;Acc:HGNC:6371]113750.0000.2272No
51TMPRSS6transmembrane serine protease 6 [Source:HGNC Symbol;Acc:HGNC:16517]117670.0000.2166No
52PROZprotein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]118130.0000.2154No
53PROCprotein C, inactivator of coagulation factors Va and VIIIa [Source:HGNC Symbol;Acc:HGNC:9451]118310.0000.2150No
54ACOX2acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]125220.0000.1963No
55P2RY1purinergic receptor P2Y1 [Source:HGNC Symbol;Acc:HGNC:8539]142900.0000.1485No
56MBL2mannose binding lectin 2 [Source:HGNC Symbol;Acc:HGNC:6922]157180.0000.1099No
57C8Bcomplement C8 beta chain [Source:HGNC Symbol;Acc:HGNC:1353]157830.0000.1081No
58C8Acomplement C8 alpha chain [Source:HGNC Symbol;Acc:HGNC:1352]157840.0000.1081No
59C8Gcomplement C8 gamma chain [Source:HGNC Symbol;Acc:HGNC:1354]157860.0000.1081No
60HTRA1HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]158080.0000.1075No
61CFDcomplement factor D [Source:HGNC Symbol;Acc:HGNC:2771]158830.0000.1055No
62CFIcomplement factor I [Source:HGNC Symbol;Acc:HGNC:5394]158840.0000.1055No
63DCTdopachrome tautomerase [Source:HGNC Symbol;Acc:HGNC:2709]161220.0000.0991No
64C9complement C9 [Source:HGNC Symbol;Acc:HGNC:1358]161930.0000.0972No
65F2coagulation factor II, thrombin [Source:HGNC Symbol;Acc:HGNC:3535]162350.0000.0961No
66F12coagulation factor XII [Source:HGNC Symbol;Acc:HGNC:3530]165320.0000.0881No
67F11coagulation factor XI [Source:HGNC Symbol;Acc:HGNC:3529]165330.0000.0881No
68FGAfibrinogen alpha chain [Source:HGNC Symbol;Acc:HGNC:3661]167520.0000.0822No
69FGGfibrinogen gamma chain [Source:HGNC Symbol;Acc:HGNC:3694]167530.0000.0822No
70OLR1oxidized low density lipoprotein receptor 1 [Source:HGNC Symbol;Acc:HGNC:8133]168000.0000.0810No
71GP9glycoprotein IX platelet [Source:HGNC Symbol;Acc:HGNC:4444]171860.0000.0705No
72TIMP3TIMP metallopeptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:11822]171940.0000.0704No
73HRGhistidine rich glycoprotein [Source:HGNC Symbol;Acc:HGNC:5181]175250.0000.0614No
74HNF4Ahepatocyte nuclear factor 4 alpha [Source:HGNC Symbol;Acc:HGNC:5024]176950.0000.0569No
75SERPING1serpin family G member 1 [Source:HGNC Symbol;Acc:HGNC:1228]178060.0000.0539No
76SERPINA1serpin family A member 1 [Source:HGNC Symbol;Acc:HGNC:8941]178170.0000.0536No
77DPP4dipeptidyl peptidase 4 [Source:HGNC Symbol;Acc:HGNC:3009]179600.0000.0498No
78MMP7matrix metallopeptidase 7 [Source:HGNC Symbol;Acc:HGNC:7174]190840.0000.0194No
79MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]190870.0000.0193No
80PF4platelet factor 4 [Source:HGNC Symbol;Acc:HGNC:8861]199650.000-0.0044No
81HMGCS23-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]200060.000-0.0055No
82PLGplasminogen [Source:HGNC Symbol;Acc:HGNC:9071]200390.000-0.0064No
83C1QAcomplement C1q A chain [Source:HGNC Symbol;Acc:HGNC:1241]200950.000-0.0078No
84LEFTY2left-right determination factor 2 [Source:HGNC Symbol;Acc:HGNC:3122]202060.000-0.0108No
85KLK8kallikrein related peptidase 8 [Source:HGNC Symbol;Acc:HGNC:6369]206410.000-0.0226No
86MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]208660.000-0.0286No
87F2RL2coagulation factor II thrombin receptor like 2 [Source:HGNC Symbol;Acc:HGNC:3539]211950.000-0.0375No
88MEP1Ameprin A subunit alpha [Source:HGNC Symbol;Acc:HGNC:7015]232910.000-0.0942No
89GP1BAglycoprotein Ib platelet subunit alpha [Source:HGNC Symbol;Acc:HGNC:4439]233520.000-0.0958No
90TFPI2tissue factor pathway inhibitor 2 [Source:HGNC Symbol;Acc:HGNC:11761]250080.000-0.1406No
91PRSS23serine protease 23 [Source:HGNC Symbol;Acc:HGNC:14370]252720.000-0.1477No
92ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]264590.000-0.1798No
93A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]270100.000-0.1947No
94SPARCsecreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]273590.000-0.2041No
95MASP2mannan binding lectin serine peptidase 2 [Source:HGNC Symbol;Acc:HGNC:6902]27887-0.049-0.2179No
96MMP15matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]27966-0.058-0.2193No
97CPB2carboxypeptidase B2 [Source:HGNC Symbol;Acc:HGNC:2300]28489-0.117-0.2322No
98C3complement C3 [Source:HGNC Symbol;Acc:HGNC:1318]29098-0.192-0.2466No
99TFtransferrin [Source:HGNC Symbol;Acc:HGNC:11740]29300-0.217-0.2497No
100RAPGEF3Rap guanine nucleotide exchange factor 3 [Source:HGNC Symbol;Acc:HGNC:16629]29369-0.225-0.2491No
101FN1fibronectin 1 [Source:HGNC Symbol;Acc:HGNC:3778]29713-0.269-0.2555No
102F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]29759-0.275-0.2537No
103HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]29924-0.298-0.2549No
104DUSP14dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]29944-0.300-0.2522No
105RAC1Rac family small GTPase 1 [Source:HGNC Symbol;Acc:HGNC:9801]30212-0.332-0.2559No
106PEF1penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30009]30294-0.342-0.2544No
107LAMP2lysosomal associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:6501]30485-0.365-0.2556No
108MMP11matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]30623-0.384-0.2551No
109C1Scomplement C1s [Source:HGNC Symbol;Acc:HGNC:1247]30851-0.420-0.2567No
110CTSOcathepsin O [Source:HGNC Symbol;Acc:HGNC:2542]32021-0.613-0.2818No
111USP11ubiquitin specific peptidase 11 [Source:HGNC Symbol;Acc:HGNC:12609]32054-0.619-0.2759No
112CRIP2cysteine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2361]32134-0.639-0.2712No
113VWFvon Willebrand factor [Source:HGNC Symbol;Acc:HGNC:12726]32259-0.666-0.2674No
114SIRT2sirtuin 2 [Source:HGNC Symbol;Acc:HGNC:10886]32395-0.693-0.2635No
115ISCUiron-sulfur cluster assembly enzyme [Source:HGNC Symbol;Acc:HGNC:29882]32650-0.746-0.2623No
116COMPcartilage oligomeric matrix protein [Source:HGNC Symbol;Acc:HGNC:2227]32716-0.762-0.2559No
117MST1macrophage stimulating 1 [Source:HGNC Symbol;Acc:HGNC:7380]33180-0.879-0.2589No
118S100A1S100 calcium binding protein A1 [Source:HGNC Symbol;Acc:HGNC:10486]33433-0.947-0.2555No
119CTSBcathepsin B [Source:HGNC Symbol;Acc:HGNC:2527]33586-0.993-0.2489No
120MSRB2methionine sulfoxide reductase B2 [Source:HGNC Symbol;Acc:HGNC:17061]34129-1.173-0.2509No
121CAPN2calpain 2 [Source:HGNC Symbol;Acc:HGNC:1479]34154-1.181-0.2388No
122CASP9caspase 9 [Source:HGNC Symbol;Acc:HGNC:1511]34275-1.224-0.2288No
123CTSEcathepsin E [Source:HGNC Symbol;Acc:HGNC:2530]34277-1.225-0.2157No
124PROS1protein S [Source:HGNC Symbol;Acc:HGNC:9456]34322-1.241-0.2035No
125CPQcarboxypeptidase Q [Source:HGNC Symbol;Acc:HGNC:16910]34513-1.316-0.1944No
126LTA4Hleukotriene A4 hydrolase [Source:HGNC Symbol;Acc:HGNC:6710]34662-1.376-0.1835No
127DUSP6dual specificity phosphatase 6 [Source:HGNC Symbol;Acc:HGNC:3072]34816-1.442-0.1721No
128CAPN5calpain 5 [Source:HGNC Symbol;Acc:HGNC:1482]35291-1.672-0.1669No
129CFHcomplement factor H [Source:HGNC Symbol;Acc:HGNC:4883]35327-1.688-0.1496No
130C1Rcomplement C1r [Source:HGNC Symbol;Acc:HGNC:1246]35404-1.729-0.1330No
131CSRP1cysteine and glycine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:2469]35409-1.730-0.1145No
132ANGangiogenin [Source:HGNC Symbol;Acc:HGNC:483]35457-1.752-0.0968No
133LRP1LDL receptor related protein 1 [Source:HGNC Symbol;Acc:HGNC:6692]35671-1.882-0.0823No
134F8coagulation factor VIII [Source:HGNC Symbol;Acc:HGNC:3546]35743-1.929-0.0634No
135LGMNlegumain [Source:HGNC Symbol;Acc:HGNC:9472]36140-2.261-0.0497No
136GSNgelsolin [Source:HGNC Symbol;Acc:HGNC:4620]36669-2.887-0.0328No
137PLAUplasminogen activator, urokinase [Source:HGNC Symbol;Acc:HGNC:9052]37041-4.0920.0013No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_COAGULATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_COAGULATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_COAGULATION