Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #KO_LPS_versus_KO_NA.greenbergcls.cls #KO_LPS_versus_KO_NA_repos |
| Phenotype | greenbergcls.cls#KO_LPS_versus_KO_NA_repos |
| Upregulated in class | KO_LPS |
| GeneSet | CHR1P35 |
| Enrichment Score (ES) | 0.45168492 |
| Normalized Enrichment Score (NES) | 1.197767 |
| Nominal p-value | 0.06741573 |
| FDR q-value | 0.4377196 |
| FWER p-Value | 0.974 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | MARCKSL1 | MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142] | 70 | 4.306 | 0.0543 | Yes |
| 2 | FGR | FGR proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3697] | 240 | 3.146 | 0.0907 | Yes |
| 3 | RNF19B | ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886] | 242 | 3.134 | 0.1316 | Yes |
| 4 | PTAFR | platelet activating factor receptor [Source:HGNC Symbol;Acc:HGNC:9582] | 254 | 3.077 | 0.1714 | Yes |
| 5 | SERINC2 | serine incorporator 2 [Source:HGNC Symbol;Acc:HGNC:23231] | 397 | 2.549 | 0.2008 | Yes |
| 6 | SNORA73B | small nucleolar RNA, H/ACA box 73B [Source:HGNC Symbol;Acc:HGNC:10116] | 539 | 2.213 | 0.2258 | Yes |
| 7 | LCK | LCK proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6524] | 570 | 2.140 | 0.2529 | Yes |
| 8 | SNHG3 | small nucleolar RNA host gene 3 [Source:HGNC Symbol;Acc:HGNC:10118] | 632 | 2.015 | 0.2776 | Yes |
| 9 | PHC2 | polyhomeotic homolog 2 [Source:HGNC Symbol;Acc:HGNC:3183] | 644 | 1.999 | 0.3033 | Yes |
| 10 | EYA3 | EYA transcriptional coactivator and phosphatase 3 [Source:HGNC Symbol;Acc:HGNC:3521] | 658 | 1.982 | 0.3288 | Yes |
| 11 | SESN2 | sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746] | 722 | 1.862 | 0.3514 | Yes |
| 12 | SELENOWP1 | selenoprotein W pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:10753] | 1068 | 1.463 | 0.3612 | Yes |
| 13 | BSDC1 | BSD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25501] | 1321 | 1.253 | 0.3707 | Yes |
| 14 | MECR | mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691] | 1333 | 1.248 | 0.3867 | Yes |
| 15 | HDAC1 | histone deacetylase 1 [Source:HGNC Symbol;Acc:HGNC:4852] | 1550 | 1.118 | 0.3954 | Yes |
| 16 | STX12 | syntaxin 12 [Source:HGNC Symbol;Acc:HGNC:11430] | 1648 | 1.060 | 0.4066 | Yes |
| 17 | SMPDL3B | sphingomyelin phosphodiesterase acid like 3B [Source:HGNC Symbol;Acc:HGNC:21416] | 1726 | 1.016 | 0.4178 | Yes |
| 18 | THEMIS2 | thymocyte selection associated family member 2 [Source:HGNC Symbol;Acc:HGNC:16839] | 1837 | 0.966 | 0.4274 | Yes |
| 19 | TAF12 | TATA-box binding protein associated factor 12 [Source:HGNC Symbol;Acc:HGNC:11545] | 2141 | 0.843 | 0.4302 | Yes |
| 20 | ZCCHC17 | zinc finger CCHC-type containing 17 [Source:HGNC Symbol;Acc:HGNC:30246] | 2408 | 0.746 | 0.4327 | Yes |
| 21 | SNHG12 | small nucleolar RNA host gene 12 [Source:HGNC Symbol;Acc:HGNC:30062] | 2553 | 0.693 | 0.4379 | Yes |
| 22 | TXLNA | taxilin alpha [Source:HGNC Symbol;Acc:HGNC:30685] | 2673 | 0.659 | 0.4432 | Yes |
| 23 | ATP5IF1 | ATP synthase inhibitory factor subunit 1 [Source:HGNC Symbol;Acc:HGNC:871] | 3021 | 0.559 | 0.4411 | Yes |
| 24 | GAPDHP20 | glyceraldehyde 3 phosphate dehydrogenase pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:37772] | 3117 | 0.536 | 0.4456 | Yes |
| 25 | NKAIN1 | sodium/potassium transporting ATPase interacting 1 [Source:HGNC Symbol;Acc:HGNC:25743] | 3317 | 0.492 | 0.4466 | Yes |
| 26 | HPCA | hippocalcin [Source:HGNC Symbol;Acc:HGNC:5144] | 3523 | 0.449 | 0.4469 | Yes |
| 27 | KPNA6 | karyopherin subunit alpha 6 [Source:HGNC Symbol;Acc:HGNC:6399] | 3560 | 0.442 | 0.4517 | Yes |
| 28 | GMEB1 | glucocorticoid modulatory element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4370] | 4117 | 0.336 | 0.4410 | No |
| 29 | AHDC1 | AT-hook DNA binding motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25230] | 4314 | 0.294 | 0.4396 | No |
| 30 | PUM1 | pumilio RNA binding family member 1 [Source:HGNC Symbol;Acc:HGNC:14957] | 4377 | 0.282 | 0.4416 | No |
| 31 | RCC1 | regulator of chromosome condensation 1 [Source:HGNC Symbol;Acc:HGNC:1913] | 4390 | 0.280 | 0.4449 | No |
| 32 | SCARNA1 | small Cajal body-specific RNA 1 [Source:HGNC Symbol;Acc:HGNC:32555] | 4644 | 0.240 | 0.4412 | No |
| 33 | YARS1 | tyrosyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:12840] | 4842 | 0.207 | 0.4386 | No |
| 34 | SNRNP40 | small nuclear ribonucleoprotein U5 subunit 40 [Source:HGNC Symbol;Acc:HGNC:30857] | 4877 | 0.201 | 0.4403 | No |
| 35 | FNDC5 | fibronectin type III domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20240] | 5059 | 0.174 | 0.4376 | No |
| 36 | SPCS2P4 | signal peptidase complex subunit 2 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:45237] | 5729 | 0.075 | 0.4205 | No |
| 37 | ZSCAN20 | zinc finger and SCAN domain containing 20 [Source:HGNC Symbol;Acc:HGNC:13093] | 5759 | 0.070 | 0.4206 | No |
| 38 | PRDX3P2 | peroxiredoxin 3 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39265] | 6086 | 0.019 | 0.4121 | No |
| 39 | RNU6-176P | RNA, U6 small nuclear 176, pseudogene [Source:HGNC Symbol;Acc:HGNC:47139] | 6926 | 0.000 | 0.3894 | No |
| 40 | LINC01648 | long intergenic non-protein coding RNA 1648 [Source:HGNC Symbol;Acc:HGNC:52435] | 7120 | 0.000 | 0.3842 | No |
| 41 | HSPD1P14 | heat shock protein family D (Hsp60) member 1 pseudogene 14 [Source:HGNC Symbol;Acc:HGNC:35143] | 8236 | 0.000 | 0.3540 | No |
| 42 | LINC01226 | long intergenic non-protein coding RNA 1226 [Source:HGNC Symbol;Acc:HGNC:49678] | 8337 | 0.000 | 0.3513 | No |
| 43 | CSMD2-AS1 | CSMD2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40882] | 8650 | 0.000 | 0.3428 | No |
| 44 | TINAGL1 | tubulointerstitial nephritis antigen like 1 [Source:HGNC Symbol;Acc:HGNC:19168] | 8660 | 0.000 | 0.3426 | No |
| 45 | OPRD1 | opioid receptor delta 1 [Source:HGNC Symbol;Acc:HGNC:8153] | 8835 | 0.000 | 0.3379 | No |
| 46 | MIR4420 | microRNA 4420 [Source:HGNC Symbol;Acc:HGNC:41772] | 9039 | 0.000 | 0.3324 | No |
| 47 | HCRTR1 | hypocretin receptor 1 [Source:HGNC Symbol;Acc:HGNC:4848] | 9064 | 0.000 | 0.3318 | No |
| 48 | RNU6-949P | RNA, U6 small nuclear 949, pseudogene [Source:HGNC Symbol;Acc:HGNC:47912] | 9383 | 0.000 | 0.3232 | No |
| 49 | TLR12P | toll like receptor 12, pseudogene [Source:HGNC Symbol;Acc:HGNC:31754] | 9555 | 0.000 | 0.3185 | No |
| 50 | A3GALT2 | alpha 1,3-galactosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:30005] | 12013 | 0.000 | 0.2521 | No |
| 51 | MTMR9LP | myotubularin related protein 9 like, pseudogene [Source:HGNC Symbol;Acc:HGNC:27920] | 15255 | 0.000 | 0.1644 | No |
| 52 | RN7SL559P | RNA, 7SL, cytoplasmic 559, pseudogene [Source:HGNC Symbol;Acc:HGNC:46575] | 15650 | 0.000 | 0.1537 | No |
| 53 | SNORA44 | small nucleolar RNA, H/ACA box 44 [Source:HGNC Symbol;Acc:HGNC:32637] | 16082 | 0.000 | 0.1421 | No |
| 54 | CSMD2 | CUB and Sushi multiple domains 2 [Source:HGNC Symbol;Acc:HGNC:19290] | 16126 | 0.000 | 0.1409 | No |
| 55 | TMEM200B | transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785] | 16295 | 0.000 | 0.1364 | No |
| 56 | RNU6-424P | RNA, U6 small nuclear 424, pseudogene [Source:HGNC Symbol;Acc:HGNC:47387] | 16305 | 0.000 | 0.1361 | No |
| 57 | COL16A1 | collagen type XVI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2193] | 16426 | 0.000 | 0.1329 | No |
| 58 | SYNC | syncoilin, intermediate filament protein [Source:HGNC Symbol;Acc:HGNC:28897] | 16851 | 0.000 | 0.1214 | No |
| 59 | SPOCD1 | SPOC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26338] | 16915 | 0.000 | 0.1197 | No |
| 60 | RAB42 | RAB42, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:28702] | 17107 | 0.000 | 0.1145 | No |
| 61 | RNU6ATAC27P | RNA, U6atac small nuclear 27, pseudogene [Source:HGNC Symbol;Acc:HGNC:46926] | 17898 | 0.000 | 0.0932 | No |
| 62 | RN7SL122P | RNA, 7SL, cytoplasmic 122, pseudogene [Source:HGNC Symbol;Acc:HGNC:46138] | 18037 | 0.000 | 0.0894 | No |
| 63 | RN7SKP16 | RN7SK pseudogene 16 [Source:HGNC Symbol;Acc:HGNC:45740] | 18514 | 0.000 | 0.0766 | No |
| 64 | RN7SKP91 | RN7SK pseudogene 91 [Source:HGNC Symbol;Acc:HGNC:45815] | 18615 | 0.000 | 0.0739 | No |
| 65 | FAM229A | family with sequence similarity 229 member A [Source:HGNC Symbol;Acc:HGNC:44652] | 18813 | 0.000 | 0.0685 | No |
| 66 | LINC01756 | long intergenic non-protein coding RNA 1756 [Source:HGNC Symbol;Acc:HGNC:52545] | 19801 | 0.000 | 0.0418 | No |
| 67 | LINC01715 | long intergenic non-protein coding RNA 1715 [Source:HGNC Symbol;Acc:HGNC:52502] | 19867 | 0.000 | 0.0401 | No |
| 68 | LINC01778 | long intergenic non-protein coding RNA 1778 [Source:HGNC Symbol;Acc:HGNC:52568] | 19942 | 0.000 | 0.0381 | No |
| 69 | TMEM54 | transmembrane protein 54 [Source:HGNC Symbol;Acc:HGNC:24143] | 20121 | 0.000 | 0.0333 | No |
| 70 | RN7SL371P | RNA, 7SL, cytoplasmic 371, pseudogene [Source:HGNC Symbol;Acc:HGNC:46387] | 20475 | 0.000 | 0.0237 | No |
| 71 | IFI6 | interferon alpha inducible protein 6 [Source:HGNC Symbol;Acc:HGNC:4054] | 20586 | 0.000 | 0.0207 | No |
| 72 | MIR5585 | microRNA 5585 [Source:HGNC Symbol;Acc:HGNC:43452] | 21770 | 0.000 | -0.0113 | No |
| 73 | SNORD99 | small nucleolar RNA, C/D box 99 [Source:HGNC Symbol;Acc:HGNC:32762] | 22200 | 0.000 | -0.0229 | No |
| 74 | MIR3605 | microRNA 3605 [Source:HGNC Symbol;Acc:HGNC:38922] | 22265 | 0.000 | -0.0246 | No |
| 75 | RNU6-40P | RNA, U6 small nuclear 40, pseudogene [Source:HGNC Symbol;Acc:HGNC:34248] | 22316 | 0.000 | -0.0260 | No |
| 76 | HMGB4 | high mobility group box 4 [Source:HGNC Symbol;Acc:HGNC:24954] | 23431 | 0.000 | -0.0561 | No |
| 77 | ADGRB2 | adhesion G protein-coupled receptor B2 [Source:HGNC Symbol;Acc:HGNC:944] | 23968 | 0.000 | -0.0706 | No |
| 78 | C1orf94 | chromosome 1 open reading frame 94 [Source:HGNC Symbol;Acc:HGNC:28250] | 24090 | 0.000 | -0.0739 | No |
| 79 | RNU6-1245P | RNA, U6 small nuclear 1245, pseudogene [Source:HGNC Symbol;Acc:HGNC:48208] | 25810 | 0.000 | -0.1204 | No |
| 80 | RNA5SP42 | RNA, 5S ribosomal pseudogene 42 [Source:HGNC Symbol;Acc:HGNC:42818] | 25848 | 0.000 | -0.1214 | No |
| 81 | MIR4254 | microRNA 4254 [Source:HGNC Symbol;Acc:HGNC:38193] | 25866 | 0.000 | -0.1218 | No |
| 82 | MATN1-AS1 | MATN1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40364] | 26019 | 0.000 | -0.1259 | No |
| 83 | ZBTB8B | zinc finger and BTB domain containing 8B [Source:HGNC Symbol;Acc:HGNC:37057] | 26492 | 0.000 | -0.1387 | No |
| 84 | LRRC37A12P | leucine rich repeat containing 37 member A12, pseudogene [Source:HGNC Symbol;Acc:HGNC:43816] | 27113 | 0.000 | -0.1555 | No |
| 85 | YTHDF2 | YTH N6-methyladenosine RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:31675] | 27366 | -0.040 | -0.1618 | No |
| 86 | XKR8 | XK related 8 [Source:HGNC Symbol;Acc:HGNC:25508] | 27729 | -0.085 | -0.1704 | No |
| 87 | MED18 | mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944] | 27777 | -0.091 | -0.1705 | No |
| 88 | TSSK3 | testis specific serine kinase 3 [Source:HGNC Symbol;Acc:HGNC:15473] | 28183 | -0.139 | -0.1797 | No |
| 89 | DCDC2B | doublecortin domain containing 2B [Source:HGNC Symbol;Acc:HGNC:32576] | 28191 | -0.140 | -0.1780 | No |
| 90 | PEF1 | penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30009] | 28470 | -0.178 | -0.1832 | No |
| 91 | SRSF4 | serine and arginine rich splicing factor 4 [Source:HGNC Symbol;Acc:HGNC:10786] | 28815 | -0.223 | -0.1896 | No |
| 92 | MATN1 | matrilin 1 [Source:HGNC Symbol;Acc:HGNC:6907] | 28998 | -0.245 | -0.1913 | No |
| 93 | TRNAU1AP | tRNA selenocysteine 1 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30813] | 29033 | -0.251 | -0.1890 | No |
| 94 | RPEP3 | ribulose-5-phosphate-3-epimerase pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:44522] | 29949 | -0.373 | -0.2089 | No |
| 95 | EIF3I | eukaryotic translation initiation factor 3 subunit I [Source:HGNC Symbol;Acc:HGNC:3272] | 30101 | -0.394 | -0.2078 | No |
| 96 | PTPRU | protein tyrosine phosphatase receptor type U [Source:HGNC Symbol;Acc:HGNC:9683] | 30391 | -0.434 | -0.2100 | No |
| 97 | PTP4A2 | protein tyrosine phosphatase 4A2 [Source:HGNC Symbol;Acc:HGNC:9635] | 30477 | -0.448 | -0.2064 | No |
| 98 | FABP3 | fatty acid binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3557] | 30576 | -0.466 | -0.2030 | No |
| 99 | TMEM39B | transmembrane protein 39B [Source:HGNC Symbol;Acc:HGNC:25510] | 31030 | -0.536 | -0.2083 | No |
| 100 | PPP1R8 | protein phosphatase 1 regulatory subunit 8 [Source:HGNC Symbol;Acc:HGNC:9296] | 31044 | -0.539 | -0.2016 | No |
| 101 | CHMP1AP1 | charged multivesicular body protein 1A pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39514] | 31209 | -0.565 | -0.1987 | No |
| 102 | KHDRBS1 | KH RNA binding domain containing, signal transduction associated 1 [Source:HGNC Symbol;Acc:HGNC:18116] | 31375 | -0.591 | -0.1954 | No |
| 103 | PHACTR4 | phosphatase and actin regulator 4 [Source:HGNC Symbol;Acc:HGNC:25793] | 31691 | -0.654 | -0.1954 | No |
| 104 | AK2 | adenylate kinase 2 [Source:HGNC Symbol;Acc:HGNC:362] | 32154 | -0.768 | -0.1979 | No |
| 105 | TRIM62 | tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574] | 32172 | -0.771 | -0.1883 | No |
| 106 | S100PBP | S100P binding protein [Source:HGNC Symbol;Acc:HGNC:25768] | 32536 | -0.859 | -0.1869 | No |
| 107 | EPB41 | erythrocyte membrane protein band 4.1 [Source:HGNC Symbol;Acc:HGNC:3377] | 32776 | -0.922 | -0.1814 | No |
| 108 | ZBTB8OS | zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094] | 32887 | -0.951 | -0.1719 | No |
| 109 | TMEM234 | transmembrane protein 234 [Source:HGNC Symbol;Acc:HGNC:28837] | 33074 | -1.005 | -0.1639 | No |
| 110 | FAM76A | family with sequence similarity 76 member A [Source:HGNC Symbol;Acc:HGNC:28530] | 33196 | -1.044 | -0.1535 | No |
| 111 | RBBP4 | RB binding protein 4, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:9887] | 33528 | -1.150 | -0.1475 | No |
| 112 | DNAJC8 | DnaJ heat shock protein family (Hsp40) member C8 [Source:HGNC Symbol;Acc:HGNC:15470] | 33829 | -1.255 | -0.1392 | No |
| 113 | CCDC28B | coiled-coil domain containing 28B [Source:HGNC Symbol;Acc:HGNC:28163] | 34229 | -1.401 | -0.1317 | No |
| 114 | ZNF362 | zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079] | 34260 | -1.417 | -0.1141 | No |
| 115 | AZIN2 | antizyme inhibitor 2 [Source:HGNC Symbol;Acc:HGNC:29957] | 34323 | -1.444 | -0.0969 | No |
| 116 | IQCC | IQ motif containing C [Source:HGNC Symbol;Acc:HGNC:25545] | 34370 | -1.463 | -0.0791 | No |
| 117 | KIAA1522 | KIAA1522 [Source:HGNC Symbol;Acc:HGNC:29301] | 34443 | -1.490 | -0.0616 | No |
| 118 | SDC3 | syndecan 3 [Source:HGNC Symbol;Acc:HGNC:10660] | 34754 | -1.622 | -0.0488 | No |
| 119 | RPA2 | replication protein A2 [Source:HGNC Symbol;Acc:HGNC:10290] | 34859 | -1.668 | -0.0299 | No |
| 120 | ZBTB8A | zinc finger and BTB domain containing 8A [Source:HGNC Symbol;Acc:HGNC:24172] | 35530 | -2.068 | -0.0210 | No |
| 121 | FAM167B | family with sequence similarity 167 member B [Source:HGNC Symbol;Acc:HGNC:28133] | 35806 | -2.273 | 0.0012 | No |
| 122 | LAPTM5 | lysosomal protein transmembrane 5 [Source:HGNC Symbol;Acc:HGNC:29612] | 36122 | -2.571 | 0.0262 | No |
