Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #KO_LPS_versus_KO_NA.greenbergcls.cls #KO_LPS_versus_KO_NA_repos |
| Phenotype | greenbergcls.cls#KO_LPS_versus_KO_NA_repos |
| Upregulated in class | KO_LPS |
| GeneSet | CHR3P13 |
| Enrichment Score (ES) | 0.6384275 |
| Normalized Enrichment Score (NES) | 1.3714839 |
| Nominal p-value | 0.06511628 |
| FDR q-value | 0.35049537 |
| FWER p-Value | 0.628 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | RYBP | RING1 and YY1 binding protein [Source:HGNC Symbol;Acc:HGNC:10480] | 505 | 2.272 | 0.1804 | Yes |
| 2 | PPP4R2 | protein phosphatase 4 regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:18296] | 615 | 2.053 | 0.3527 | Yes |
| 3 | FOXP1 | forkhead box P1 [Source:HGNC Symbol;Acc:HGNC:3823] | 1493 | 1.148 | 0.4271 | Yes |
| 4 | FTH1P23 | ferritin heavy chain 1 pseudogene 23 [Source:HGNC Symbol;Acc:HGNC:37641] | 1556 | 1.114 | 0.5206 | Yes |
| 5 | UBE2Q2P9 | ubiquitin conjugating enzyme E2 Q2 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:49517] | 1850 | 0.963 | 0.5949 | Yes |
| 6 | SHQ1 | SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543] | 2496 | 0.714 | 0.6384 | Yes |
| 7 | FOXP1-IT1 | FOXP1 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41335] | 5489 | 0.112 | 0.5672 | No |
| 8 | HMGB1P36 | high mobility group box 1 pseudogene 36 [Source:HGNC Symbol;Acc:HGNC:39176] | 5623 | 0.089 | 0.5713 | No |
| 9 | RNU2-64P | RNA, U2 small nuclear 64, pseudogene [Source:HGNC Symbol;Acc:HGNC:48557] | 7732 | 0.000 | 0.5144 | No |
| 10 | PROK2 | prokineticin 2 [Source:HGNC Symbol;Acc:HGNC:18455] | 8075 | 0.000 | 0.5051 | No |
| 11 | MDFIC2 | MyoD family inhibitor domain containing 2 [Source:HGNC Symbol;Acc:HGNC:53442] | 8125 | 0.000 | 0.5038 | No |
| 12 | EBLN2 | endogenous Bornavirus like nucleoprotein 2 [Source:HGNC Symbol;Acc:HGNC:25493] | 9435 | 0.000 | 0.4685 | No |
| 13 | RNU6-557P | RNA, U6 small nuclear 557, pseudogene [Source:HGNC Symbol;Acc:HGNC:47520] | 10419 | 0.000 | 0.4420 | No |
| 14 | RNU7-119P | RNA, U7 small nuclear 119 pseudogene [Source:HGNC Symbol;Acc:HGNC:45653] | 10527 | 0.000 | 0.4391 | No |
| 15 | PDZRN3 | PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:17704] | 11373 | 0.000 | 0.4163 | No |
| 16 | RN7SL418P | RNA, 7SL, cytoplasmic 418, pseudogene [Source:HGNC Symbol;Acc:HGNC:46434] | 11714 | 0.000 | 0.4071 | No |
| 17 | UQCRHP4 | ubiquinol-cytochrome c reductase hinge protein pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:38047] | 12054 | 0.000 | 0.3979 | No |
| 18 | LINC00877 | long intergenic non-protein coding RNA 877 [Source:HGNC Symbol;Acc:HGNC:27706] | 12264 | 0.000 | 0.3923 | No |
| 19 | LINC00870 | long intergenic non-protein coding RNA 870 [Source:HGNC Symbol;Acc:HGNC:27319] | 12266 | 0.000 | 0.3923 | No |
| 20 | MIR1284 | microRNA 1284 [Source:HGNC Symbol;Acc:HGNC:35362] | 12426 | 0.000 | 0.3880 | No |
| 21 | CCDC75P1 | coiled-coil domain containing 75 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42659] | 12434 | 0.000 | 0.3878 | No |
| 22 | RNU6-281P | RNA, U6 small nuclear 281, pseudogene [Source:HGNC Symbol;Acc:HGNC:47244] | 14953 | 0.000 | 0.3198 | No |
| 23 | RNU7-19P | RNA, U7 small nuclear 19 pseudogene [Source:HGNC Symbol;Acc:HGNC:34115] | 15288 | 0.000 | 0.3108 | No |
| 24 | PDZRN3-AS1 | PDZRN3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40814] | 15547 | 0.000 | 0.3039 | No |
| 25 | SAMMSON | survival associated mitochondrial melanoma specific oncogenic non-coding RNA [Source:HGNC Symbol;Acc:HGNC:49644] | 16995 | 0.000 | 0.2648 | No |
| 26 | GPR27 | G protein-coupled receptor 27 [Source:HGNC Symbol;Acc:HGNC:4482] | 17420 | 0.000 | 0.2534 | No |
| 27 | RNA5SP136 | RNA, 5S ribosomal pseudogene 136 [Source:HGNC Symbol;Acc:HGNC:43036] | 18997 | 0.000 | 0.2108 | No |
| 28 | FOXP1-AS1 | FOXP1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41942] | 20888 | 0.000 | 0.1598 | No |
| 29 | LINC02047 | long intergenic non-protein coding RNA 2047 [Source:HGNC Symbol;Acc:HGNC:52887] | 21259 | 0.000 | 0.1498 | No |
| 30 | LINC02005 | long intergenic non-protein coding RNA 2005 [Source:HGNC Symbol;Acc:HGNC:52839] | 21386 | 0.000 | 0.1464 | No |
| 31 | RN7SL271P | RNA, 7SL, cytoplasmic 271, pseudogene [Source:HGNC Symbol;Acc:HGNC:46287] | 23301 | 0.000 | 0.0948 | No |
| 32 | GXYLT2 | glucoside xylosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:33383] | 24815 | 0.000 | 0.0540 | No |
| 33 | RNU1-62P | RNA, U1 small nuclear 62, pseudogene [Source:HGNC Symbol;Acc:HGNC:48404] | 25324 | 0.000 | 0.0402 | No |
| 34 | RNU6-1270P | RNA, U6 small nuclear 1270, pseudogene [Source:HGNC Symbol;Acc:HGNC:48233] | 26213 | 0.000 | 0.0163 | No |
| 35 | COX6CP6 | cytochrome c oxidase subunit 6C pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:47037] | 28794 | -0.221 | -0.0345 | No |
| 36 | LAPTM4BP2 | lysosomal protein transmembrane 4 beta pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:51935] | 29937 | -0.371 | -0.0336 | No |
| 37 | MITF | melanocyte inducing transcription factor [Source:HGNC Symbol;Acc:HGNC:7105] | 31083 | -0.545 | -0.0180 | No |
| 38 | EIF4E3 | eukaryotic translation initiation factor 4E family member 3 [Source:HGNC Symbol;Acc:HGNC:31837] | 35583 | -2.110 | 0.0407 | No |
