Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #KO_LPS_versus_KO_NA.greenbergcls.cls #KO_LPS_versus_KO_NA_repos |
| Phenotype | greenbergcls.cls#KO_LPS_versus_KO_NA_repos |
| Upregulated in class | KO_LPS |
| GeneSet | CHR8P22 |
| Enrichment Score (ES) | 0.5216124 |
| Normalized Enrichment Score (NES) | 1.1860483 |
| Nominal p-value | 0.1509434 |
| FDR q-value | 0.44360986 |
| FWER p-Value | 0.98 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | MTMR7 | myotubularin related protein 7 [Source:HGNC Symbol;Acc:HGNC:7454] | 23 | 4.808 | 0.2281 | Yes |
| 2 | MSR1 | macrophage scavenger receptor 1 [Source:HGNC Symbol;Acc:HGNC:7376] | 227 | 3.202 | 0.3749 | Yes |
| 3 | VPS37A | VPS37A subunit of ESCRT-I [Source:HGNC Symbol;Acc:HGNC:24928] | 1389 | 1.210 | 0.4011 | Yes |
| 4 | CNOT7 | CCR4-NOT transcription complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:14101] | 2280 | 0.785 | 0.4145 | Yes |
| 5 | SLC7A2 | solute carrier family 7 member 2 [Source:HGNC Symbol;Acc:HGNC:11060] | 2476 | 0.722 | 0.4435 | Yes |
| 6 | MICU3 | mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820] | 2608 | 0.677 | 0.4722 | Yes |
| 7 | ZDHHC2 | zinc finger DHHC-type palmitoyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:18469] | 2799 | 0.619 | 0.4965 | Yes |
| 8 | NAT2 | N-acetyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:7646] | 3436 | 0.467 | 0.5016 | Yes |
| 9 | RPL35P6 | ribosomal protein L35 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:35520] | 3687 | 0.413 | 0.5145 | Yes |
| 10 | EIF4EP5 | eukaryotic translation initiation factor 4E pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:51463] | 4043 | 0.352 | 0.5216 | Yes |
| 11 | PDGFRL | platelet derived growth factor receptor like [Source:HGNC Symbol;Acc:HGNC:8805] | 5275 | 0.140 | 0.4950 | No |
| 12 | PSD3 | pleckstrin and Sec7 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:19093] | 5782 | 0.068 | 0.4846 | No |
| 13 | FGF20 | fibroblast growth factor 20 [Source:HGNC Symbol;Acc:HGNC:3677] | 6753 | 0.000 | 0.4585 | No |
| 14 | RNU6-397P | RNA, U6 small nuclear 397, pseudogene [Source:HGNC Symbol;Acc:HGNC:47360] | 8191 | 0.000 | 0.4197 | No |
| 15 | AC027117.1 | novel transcript | 9129 | 0.000 | 0.3944 | No |
| 16 | AC124242.1 | novel transcript | 10494 | 0.000 | 0.3576 | No |
| 17 | AC100849.2 | novel transcript | 13172 | 0.000 | 0.2853 | No |
| 18 | TRMT9B | tRNA methyltransferase 9B (putative) [Source:HGNC Symbol;Acc:HGNC:26725] | 13218 | 0.000 | 0.2841 | No |
| 19 | C8orf48 | chromosome 8 open reading frame 48 [Source:HGNC Symbol;Acc:HGNC:26345] | 13785 | 0.000 | 0.2688 | No |
| 20 | SNORA62 | small nucleolar RNA, H/ACA box 62 [Source:HGNC Symbol;Acc:HGNC:10107] | 16046 | 0.000 | 0.2078 | No |
| 21 | DLC1 | DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897] | 16599 | 0.000 | 0.1929 | No |
| 22 | MRPL49P2 | mitochondrial ribosomal protein L49 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:29718] | 17056 | 0.000 | 0.1806 | No |
| 23 | RNA5SP256 | RNA, 5S ribosomal pseudogene 256 [Source:HGNC Symbol;Acc:HGNC:43156] | 19358 | 0.000 | 0.1185 | No |
| 24 | RNA5SP255 | RNA, 5S ribosomal pseudogene 255 [Source:HGNC Symbol;Acc:HGNC:43155] | 19360 | 0.000 | 0.1185 | No |
| 25 | MIR548V | microRNA 548v [Source:HGNC Symbol;Acc:HGNC:38302] | 21429 | 0.000 | 0.0627 | No |
| 26 | MIR383 | microRNA 383 [Source:HGNC Symbol;Acc:HGNC:31876] | 21892 | 0.000 | 0.0502 | No |
| 27 | NATP | N-acetyltransferase pseudogene [Source:HGNC Symbol;Acc:HGNC:15] | 22135 | 0.000 | 0.0437 | No |
| 28 | MTND4LP26 | MT-ND4L pseudogene 26 [Source:HGNC Symbol;Acc:HGNC:42260] | 22868 | 0.000 | 0.0239 | No |
| 29 | RN7SL474P | RNA, 7SL, cytoplasmic 474, pseudogene [Source:HGNC Symbol;Acc:HGNC:46490] | 23789 | 0.000 | -0.0009 | No |
| 30 | RNU7-153P | RNA, U7 small nuclear 153 pseudogene [Source:HGNC Symbol;Acc:HGNC:45687] | 24041 | 0.000 | -0.0077 | No |
| 31 | ADAM24P | ADAM metallopeptidase domain 24, pseudogene [Source:HGNC Symbol;Acc:HGNC:203] | 24400 | 0.000 | -0.0174 | No |
| 32 | MTND4P7 | MT-ND4 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:42234] | 24846 | 0.000 | -0.0294 | No |
| 33 | FGL1 | fibrinogen like 1 [Source:HGNC Symbol;Acc:HGNC:3695] | 25141 | 0.000 | -0.0373 | No |
| 34 | RNU6-842P | RNA, U6 small nuclear 842, pseudogene [Source:HGNC Symbol;Acc:HGNC:47805] | 25640 | 0.000 | -0.0507 | No |
| 35 | PPM1AP1 | protein phosphatase, Mg2+/Mn2+ dependent 1A pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:30175] | 29354 | -0.295 | -0.1369 | No |
| 36 | SGCZ | sarcoglycan zeta [Source:HGNC Symbol;Acc:HGNC:14075] | 31580 | -0.633 | -0.1669 | No |
| 37 | MTUS1 | microtubule associated scaffold protein 1 [Source:HGNC Symbol;Acc:HGNC:29789] | 32112 | -0.758 | -0.1452 | No |
| 38 | TUSC3 | tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242] | 33302 | -1.079 | -0.1259 | No |
| 39 | NAT1 | N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7645] | 33955 | -1.298 | -0.0818 | No |
| 40 | ASAH1 | N-acylsphingosine amidohydrolase 1 [Source:HGNC Symbol;Acc:HGNC:735] | 34485 | -1.513 | -0.0241 | No |
| 41 | PCM1 | pericentriolar material 1 [Source:HGNC Symbol;Acc:HGNC:8727] | 35410 | -1.984 | 0.0453 | No |
