Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_LPS_versus_KO_NA.greenbergcls.cls
#KO_LPS_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetGNF2_FEN1
Enrichment Score (ES)-0.8566021
Normalized Enrichment Score (NES)-1.6567175
Nominal p-value0.0
FDR q-value2.1766526E-4
FWER p-Value0.004
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_FEN1   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GAR1GAR1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:14264]8861.656-0.0110No
2CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]23570.761-0.0447No
3HNRNPABheterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:HGNC:5034]24630.725-0.0419No
4DKC1dyskerin pseudouridine synthase 1 [Source:HGNC Symbol;Acc:HGNC:2890]43000.299-0.0892No
5METAP2methionyl aminopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:16672]51330.163-0.1103No
6ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]258200.000-0.6689No
7SNRPD1small nuclear ribonucleoprotein D1 polypeptide [Source:HGNC Symbol;Acc:HGNC:11158]28221-0.143-0.7326No
8DHFRdihydrofolate reductase [Source:HGNC Symbol;Acc:HGNC:2861]28511-0.184-0.7390No
9COPS3COP9 signalosome subunit 3 [Source:HGNC Symbol;Acc:HGNC:2239]31971-0.721-0.8267No
10HAT1histone acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:4821]32676-0.898-0.8387No
11TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]32921-0.962-0.8378No
12VRK1VRK serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:12718]33043-0.994-0.8333No
13PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]33187-1.040-0.8290No
14FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]34209-1.394-0.8457Yes
15CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]34560-1.537-0.8432Yes
16PCCBpropionyl-CoA carboxylase subunit beta [Source:HGNC Symbol;Acc:HGNC:8654]34841-1.659-0.8378Yes
17HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]34948-1.710-0.8273Yes
18GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]35070-1.784-0.8166Yes
19MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]35218-1.870-0.8060Yes
20RFC5replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]35250-1.890-0.7921Yes
21DUTdeoxyuridine triphosphatase [Source:HGNC Symbol;Acc:HGNC:3078]35306-1.922-0.7785Yes
22DTYMKdeoxythymidylate kinase [Source:HGNC Symbol;Acc:HGNC:3061]35322-1.930-0.7639Yes
23MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]35462-2.024-0.7518Yes
24PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]35526-2.066-0.7374Yes
25NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]35590-2.112-0.7226Yes
26PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]35629-2.136-0.7070Yes
27DNAJC9DnaJ heat shock protein family (Hsp40) member C9 [Source:HGNC Symbol;Acc:HGNC:19123]35912-2.379-0.6960Yes
28GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]35976-2.431-0.6787Yes
29RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]36006-2.459-0.6603Yes
30DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]36021-2.474-0.6414Yes
31RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]36023-2.475-0.6221Yes
32MCM5minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]36043-2.495-0.6031Yes
33FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]36050-2.499-0.5837Yes
34SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]36278-2.752-0.5684Yes
35RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]36325-2.825-0.5476Yes
36POLE2DNA polymerase epsilon 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9178]36416-2.915-0.5272Yes
37HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36448-2.956-0.5050Yes
38MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]36458-2.975-0.4820Yes
39GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]36495-3.045-0.4592Yes
40SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]36578-3.169-0.4366Yes
41CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36597-3.196-0.4122Yes
42TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36619-3.233-0.3875Yes
43DTLdenticleless E3 ubiquitin protein ligase homolog [Source:HGNC Symbol;Acc:HGNC:30288]36622-3.236-0.3623Yes
44MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36647-3.278-0.3373Yes
45FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36684-3.340-0.3122Yes
46RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36735-3.416-0.2869Yes
47KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]36802-3.541-0.2610Yes
48KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36819-3.570-0.2336Yes
49CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36831-3.600-0.2058Yes
50NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36856-3.657-0.1779Yes
51PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36868-3.678-0.1495Yes
52CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36886-3.735-0.1207Yes
53E2F8E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]36915-3.854-0.0914Yes
54MSH2mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]36946-3.945-0.0614Yes
55TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]37012-4.172-0.0306Yes
56NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]37016-4.1840.0020Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_FEN1   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_FEN1: Random ES distribution   
Gene set null distribution of ES for GNF2_FEN1