Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_LPS_versus_KO_NA.greenbergcls.cls
#KO_LPS_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_LPS
GeneSetMODULE_345
Enrichment Score (ES)0.6725564
Normalized Enrichment Score (NES)1.7396606
Nominal p-value0.0
FDR q-value0.028416501
FWER p-Value0.125
Table: GSEA Results Summary



Fig 1: Enrichment plot: MODULE_345   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]84.9530.0359Yes
2RSAD2radical S-adenosyl methionine domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30908]144.8970.0715Yes
3IFIT1interferon induced protein with tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:5407]184.8590.1069Yes
4GBP1guanylate binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4182]214.8310.1421Yes
5MX1MX dynamin like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:7532]284.7720.1768Yes
6IFI44interferon induced protein 44 [Source:HGNC Symbol;Acc:HGNC:16938]534.5130.2091Yes
7HELZ2helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]794.2150.2392Yes
8GBP2guanylate binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4183]864.1660.2694Yes
9IFI35interferon induced protein 35 [Source:HGNC Symbol;Acc:HGNC:5399]1044.0290.2984Yes
10PELI1pellino E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:8827]1133.9560.3270Yes
11STAT1signal transducer and activator of transcription 1 [Source:HGNC Symbol;Acc:HGNC:11362]1343.8070.3542Yes
12CEBPDCCAAT enhancer binding protein delta [Source:HGNC Symbol;Acc:HGNC:1835]1363.7910.3819Yes
13OAS12'-5'-oligoadenylate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:8086]1423.7280.4090Yes
14OAS32'-5'-oligoadenylate synthetase 3 [Source:HGNC Symbol;Acc:HGNC:8088]1763.5540.4340Yes
15UBE2L6ubiquitin conjugating enzyme E2 L6 [Source:HGNC Symbol;Acc:HGNC:12490]1823.5170.4595Yes
16LGALS3BPgalectin 3 binding protein [Source:HGNC Symbol;Acc:HGNC:6564]2053.3430.4833Yes
17TAP1transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]2073.3330.5076Yes
18CD14CD14 molecule [Source:HGNC Symbol;Acc:HGNC:1628]2383.1590.5299Yes
19POU2F2POU class 2 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9213]2533.0780.5520Yes
20PARP14poly(ADP-ribose) polymerase family member 14 [Source:HGNC Symbol;Acc:HGNC:29232]2743.0050.5734Yes
21KCTD12potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]5422.2020.5822Yes
22RRP15ribosomal RNA processing 15 homolog [Source:HGNC Symbol;Acc:HGNC:24255]5822.1130.5966Yes
23IFITM3interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]5842.1050.6119Yes
24AQP9aquaporin 9 [Source:HGNC Symbol;Acc:HGNC:643]7011.9040.6227Yes
25BLNKB cell linker [Source:HGNC Symbol;Acc:HGNC:14211]12111.3320.6186Yes
26HLA-Amajor histocompatibility complex, class I, A [Source:HGNC Symbol;Acc:HGNC:4931]12941.2740.6257Yes
27SAMSN1SAM domain, SH3 domain and nuclear localization signals 1 [Source:HGNC Symbol;Acc:HGNC:10528]13811.2140.6322Yes
28FOXP1forkhead box P1 [Source:HGNC Symbol;Acc:HGNC:3823]14931.1480.6376Yes
29HLA-Cmajor histocompatibility complex, class I, C [Source:HGNC Symbol;Acc:HGNC:4933]15871.0940.6431Yes
30CD86CD86 molecule [Source:HGNC Symbol;Acc:HGNC:1705]16151.0800.6502Yes
31RNF31ring finger protein 31 [Source:HGNC Symbol;Acc:HGNC:16031]16641.0510.6566Yes
32FPR1formyl peptide receptor 1 [Source:HGNC Symbol;Acc:HGNC:3826]18400.9650.6589Yes
33THBS1thrombospondin 1 [Source:HGNC Symbol;Acc:HGNC:11785]19150.9390.6638Yes
34ZNF436zinc finger protein 436 [Source:HGNC Symbol;Acc:HGNC:20814]20020.9000.6680Yes
35TXLNGYtaxilin gamma pseudogene, Y-linked [Source:HGNC Symbol;Acc:HGNC:18473]21720.8270.6695Yes
36CCDC186coiled-coil domain containing 186 [Source:HGNC Symbol;Acc:HGNC:24349]23700.7590.6697Yes
37ISG15ISG15 ubiquitin like modifier [Source:HGNC Symbol;Acc:HGNC:4053]25510.6930.6699Yes
38UNKLunk like zinc finger [Source:HGNC Symbol;Acc:HGNC:14184]26340.6710.6726Yes
39PPP1R16Bprotein phosphatase 1 regulatory subunit 16B [Source:HGNC Symbol;Acc:HGNC:15850]29070.5860.6695No
40CD79BCD79b molecule [Source:HGNC Symbol;Acc:HGNC:1699]35730.4390.6547No
41P2RY10P2Y receptor family member 10 [Source:HGNC Symbol;Acc:HGNC:19906]36170.4280.6566No
42TNFAIP6TNF alpha induced protein 6 [Source:HGNC Symbol;Acc:HGNC:11898]38580.3840.6530No
43SPIBSpi-B transcription factor [Source:HGNC Symbol;Acc:HGNC:11242]40140.3580.6514No
44IFI44Linterferon induced protein 44 like [Source:HGNC Symbol;Acc:HGNC:17817]42250.3130.6480No
45CTSLcathepsin L [Source:HGNC Symbol;Acc:HGNC:2537]42620.3040.6492No
46UTYubiquitously transcribed tetratricopeptide repeat containing, Y-linked [Source:HGNC Symbol;Acc:HGNC:12638]43780.2820.6482No
47IL7Rinterleukin 7 receptor [Source:HGNC Symbol;Acc:HGNC:6024]49250.1940.6348No
48IFITM1interferon induced transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:5412]49790.1860.6347No
49MECP2methyl-CpG binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6990]53050.1350.6269No
50CNRIP1cannabinoid receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24546]55040.1090.6224No
51POLR3BRNA polymerase III subunit B [Source:HGNC Symbol;Acc:HGNC:30348]55810.0970.6210No
52FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]56970.0780.6185No
53CCL18C-C motif chemokine ligand 18 [Source:HGNC Symbol;Acc:HGNC:10616]62540.0000.6034No
54SDC2syndecan 2 [Source:HGNC Symbol;Acc:HGNC:10659]66860.0000.5918No
55SELLselectin L [Source:HGNC Symbol;Acc:HGNC:10720]70090.0000.5831No
56CAMK4calcium/calmodulin dependent protein kinase IV [Source:HGNC Symbol;Acc:HGNC:1464]88700.0000.5328No
57GSTM2glutathione S-transferase mu 2 [Source:HGNC Symbol;Acc:HGNC:4634]95400.0000.5147No
58KCNQ5potassium voltage-gated channel subfamily Q member 5 [Source:HGNC Symbol;Acc:HGNC:6299]97250.0000.5097No
59ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]97920.0000.5079No
60CARD16caspase recruitment domain family member 16 [Source:HGNC Symbol;Acc:HGNC:33701]97970.0000.5078No
61APOL3apolipoprotein L3 [Source:HGNC Symbol;Acc:HGNC:14868]99370.0000.5040No
62CYP1B1cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]104200.0000.4910No
63MS4A1membrane spanning 4-domains A1 [Source:HGNC Symbol;Acc:HGNC:7315]109230.0000.4774No
64NEK11NIMA related kinase 11 [Source:HGNC Symbol;Acc:HGNC:18593]120650.0000.4465No
65UNC79unc-79 homolog, NALCN channel complex subunit [Source:HGNC Symbol;Acc:HGNC:19966]123820.0000.4380No
66TNFSF10TNF superfamily member 10 [Source:HGNC Symbol;Acc:HGNC:11925]123860.0000.4379No
67BST2bone marrow stromal cell antigen 2 [Source:HGNC Symbol;Acc:HGNC:1119]124150.0000.4371No
68IGKCimmunoglobulin kappa constant [Source:HGNC Symbol;Acc:HGNC:5716]124510.0000.4362No
69TCL1AT cell leukemia/lymphoma 1A [Source:HGNC Symbol;Acc:HGNC:11648]130060.0000.4212No
70TPTE2transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 [Source:HGNC Symbol;Acc:HGNC:17299]137730.0000.4005No
71PNMA8APNMA family member 8A [Source:HGNC Symbol;Acc:HGNC:25578]145300.0000.3800No
72IL2RBinterleukin 2 receptor subunit beta [Source:HGNC Symbol;Acc:HGNC:6009]155930.0000.3513No
73CD2CD2 molecule [Source:HGNC Symbol;Acc:HGNC:1639]157110.0000.3481No
74TTLL2tubulin tyrosine ligase like 2 [Source:HGNC Symbol;Acc:HGNC:21211]161360.0000.3367No
75HLA-DRAmajor histocompatibility complex, class II, DR alpha [Source:HGNC Symbol;Acc:HGNC:4947]161650.0000.3359No
76MST1Lmacrophage stimulating 1 like [Source:HGNC Symbol;Acc:HGNC:7390]162090.0000.3348No
77TREM1triggering receptor expressed on myeloid cells 1 [Source:HGNC Symbol;Acc:HGNC:17760]164600.0000.3280No
78IL3RAinterleukin 3 receptor subunit alpha [Source:HGNC Symbol;Acc:HGNC:6012]164700.0000.3277No
79IGHG3immunoglobulin heavy constant gamma 3 (G3m marker) [Source:HGNC Symbol;Acc:HGNC:5527]171020.0000.3107No
80SERPINA5serpin family A member 5 [Source:HGNC Symbol;Acc:HGNC:8723]177210.0000.2940No
81HLA-DQA1major histocompatibility complex, class II, DQ alpha 1 [Source:HGNC Symbol;Acc:HGNC:4942]183060.0000.2782No
82IGLJ3immunoglobulin lambda joining 3 [Source:HGNC Symbol;Acc:HGNC:5865]183250.0000.2777No
83IGLL1immunoglobulin lambda like polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:5870]183540.0000.2769No
84HLA-DPA1major histocompatibility complex, class II, DP alpha 1 [Source:HGNC Symbol;Acc:HGNC:4938]187550.0000.2661No
85HLA-DPB1major histocompatibility complex, class II, DP beta 1 [Source:HGNC Symbol;Acc:HGNC:4940]187750.0000.2656No
86MALmal, T cell differentiation protein [Source:HGNC Symbol;Acc:HGNC:6817]187980.0000.2650No
87CXCL9C-X-C motif chemokine ligand 9 [Source:HGNC Symbol;Acc:HGNC:7098]193310.0000.2506No
88CACNG4calcium voltage-gated channel auxiliary subunit gamma 4 [Source:HGNC Symbol;Acc:HGNC:1408]205240.0000.2183No
89UNC5Dunc-5 netrin receptor D [Source:HGNC Symbol;Acc:HGNC:18634]207220.0000.2130No
90GNLYgranulysin [Source:HGNC Symbol;Acc:HGNC:4414]222490.0000.1717No
91CCL7C-C motif chemokine ligand 7 [Source:HGNC Symbol;Acc:HGNC:10634]227250.0000.1589No
92CD19CD19 molecule [Source:HGNC Symbol;Acc:HGNC:1633]227880.0000.1572No
93CD27CD27 molecule [Source:HGNC Symbol;Acc:HGNC:11922]228050.0000.1568No
94CD3DCD3d molecule [Source:HGNC Symbol;Acc:HGNC:1673]228160.0000.1565No
95KLRK1killer cell lectin like receptor K1 [Source:HGNC Symbol;Acc:HGNC:18788]231280.0000.1481No
96UCP1uncoupling protein 1 [Source:HGNC Symbol;Acc:HGNC:12517]231620.0000.1472No
97DEFA1defensin alpha 1 [Source:HGNC Symbol;Acc:HGNC:2761]232500.0000.1448No
98ADGRE2adhesion G protein-coupled receptor E2 [Source:HGNC Symbol;Acc:HGNC:3337]240940.0000.1220No
99HBA2hemoglobin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:4824]247900.0000.1032No
100CD79ACD79a molecule [Source:HGNC Symbol;Acc:HGNC:1698]252020.0000.0921No
101STK31serine/threonine kinase 31 [Source:HGNC Symbol;Acc:HGNC:11407]254790.0000.0847No
102SLC22A23solute carrier family 22 member 23 [Source:HGNC Symbol;Acc:HGNC:21106]263910.0000.0600No
103CD5CD5 molecule [Source:HGNC Symbol;Acc:HGNC:1685]28156-0.1340.0133No
104UNC13Bunc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]28386-0.1660.0083No
105HLA-DMBmajor histocompatibility complex, class II, DM beta [Source:HGNC Symbol;Acc:HGNC:4935]28981-0.243-0.0060No
106KIAA0753KIAA0753 [Source:HGNC Symbol;Acc:HGNC:29110]29635-0.327-0.0213No
107FCRLAFc receptor like A [Source:HGNC Symbol;Acc:HGNC:18504]29656-0.330-0.0194No
108AXIN1axin 1 [Source:HGNC Symbol;Acc:HGNC:903]30096-0.394-0.0284No
109HLA-DQB1major histocompatibility complex, class II, DQ beta 1 [Source:HGNC Symbol;Acc:HGNC:4944]30646-0.476-0.0398No
110IFI27interferon alpha inducible protein 27 [Source:HGNC Symbol;Acc:HGNC:5397]30715-0.484-0.0381No
111BANK1B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]31001-0.532-0.0419No
112TNFRSF25TNF receptor superfamily member 25 [Source:HGNC Symbol;Acc:HGNC:11910]31311-0.580-0.0461No
113LIMD2LIM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28142]31804-0.679-0.0544No
114CD37CD37 molecule [Source:HGNC Symbol;Acc:HGNC:1666]31843-0.688-0.0504No
115HVCN1hydrogen voltage gated channel 1 [Source:HGNC Symbol;Acc:HGNC:28240]31872-0.696-0.0461No
116RUBCNLrubicon like autophagy enhancer [Source:HGNC Symbol;Acc:HGNC:20420]32294-0.796-0.0517No
117HLA-DMAmajor histocompatibility complex, class II, DM alpha [Source:HGNC Symbol;Acc:HGNC:4934]33420-1.115-0.0740No
118LPAR6lysophosphatidic acid receptor 6 [Source:HGNC Symbol;Acc:HGNC:15520]33631-1.187-0.0710No
119TTC30Atetratricopeptide repeat domain 30A [Source:HGNC Symbol;Acc:HGNC:25853]34283-1.427-0.0782No
120CD74CD74 molecule [Source:HGNC Symbol;Acc:HGNC:1697]35032-1.757-0.0856No
121FAM53Bfamily with sequence similarity 53 member B [Source:HGNC Symbol;Acc:HGNC:28968]35853-2.321-0.0909No
122ABTB1ankyrin repeat and BTB domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18275]36300-2.788-0.0826No
123FADS1fatty acid desaturase 1 [Source:HGNC Symbol;Acc:HGNC:3574]36387-2.890-0.0638No
124LGMNlegumain [Source:HGNC Symbol;Acc:HGNC:9472]36695-3.366-0.0475No
125IGHMimmunoglobulin heavy constant mu [Source:HGNC Symbol;Acc:HGNC:5541]36921-3.869-0.0254No
126ATP2A3ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:HGNC Symbol;Acc:HGNC:813]36989-4.1010.0027No
Table: GSEA details [plain text format]



Fig 2: MODULE_345   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: MODULE_345: Random ES distribution   
Gene set null distribution of ES for MODULE_345