Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #KO_LPS_versus_KO_NA.greenbergcls.cls #KO_LPS_versus_KO_NA_repos |
| Phenotype | greenbergcls.cls#KO_LPS_versus_KO_NA_repos |
| Upregulated in class | KO_LPS |
| GeneSet | MODULE_385 |
| Enrichment Score (ES) | 0.7947407 |
| Normalized Enrichment Score (NES) | 1.6392452 |
| Nominal p-value | 0.007968128 |
| FDR q-value | 0.0768287 |
| FWER p-Value | 0.444 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | HBEGF | heparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059] | 1460 | 1.167 | 0.2322 | Yes |
| 2 | THBS4 | thrombospondin 4 [Source:HGNC Symbol;Acc:HGNC:11788] | 2441 | 0.732 | 0.3762 | Yes |
| 3 | LAMC2 | laminin subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:6493] | 2812 | 0.616 | 0.5096 | Yes |
| 4 | SERPIND1 | serpin family D member 1 [Source:HGNC Symbol;Acc:HGNC:4838] | 3022 | 0.559 | 0.6340 | Yes |
| 5 | MDK | midkine [Source:HGNC Symbol;Acc:HGNC:6972] | 3639 | 0.424 | 0.7162 | Yes |
| 6 | LPL | lipoprotein lipase [Source:HGNC Symbol;Acc:HGNC:6677] | 3935 | 0.372 | 0.7947 | Yes |
| 7 | APP | amyloid beta precursor protein [Source:HGNC Symbol;Acc:HGNC:620] | 5601 | 0.093 | 0.7714 | No |
| 8 | LIPC | lipase C, hepatic type [Source:HGNC Symbol;Acc:HGNC:6619] | 6077 | 0.020 | 0.7633 | No |
| 9 | AOC1 | amine oxidase copper containing 1 [Source:HGNC Symbol;Acc:HGNC:80] | 6262 | 0.000 | 0.7583 | No |
| 10 | CCL23 | C-C motif chemokine ligand 23 [Source:HGNC Symbol;Acc:HGNC:10622] | 6263 | 0.000 | 0.7583 | No |
| 11 | APOH | apolipoprotein H [Source:HGNC Symbol;Acc:HGNC:616] | 6688 | 0.000 | 0.7469 | No |
| 12 | APOB | apolipoprotein B [Source:HGNC Symbol;Acc:HGNC:603] | 6690 | 0.000 | 0.7468 | No |
| 13 | FGFR1 | fibroblast growth factor receptor 1 [Source:HGNC Symbol;Acc:HGNC:3688] | 7015 | 0.000 | 0.7381 | No |
| 14 | PRG2 | proteoglycan 2, pro eosinophil major basic protein [Source:HGNC Symbol;Acc:HGNC:9362] | 11359 | 0.000 | 0.6209 | No |
| 15 | VTN | vitronectin [Source:HGNC Symbol;Acc:HGNC:12724] | 13201 | 0.000 | 0.5712 | No |
| 16 | HRG | histidine rich glycoprotein [Source:HGNC Symbol;Acc:HGNC:5181] | 17416 | 0.000 | 0.4575 | No |
| 17 | CXCL6 | C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643] | 19329 | 0.000 | 0.4060 | No |
| 18 | PTN | pleiotrophin [Source:HGNC Symbol;Acc:HGNC:9630] | 20010 | 0.000 | 0.3876 | No |
| 19 | FSTL1 | follistatin like 1 [Source:HGNC Symbol;Acc:HGNC:3972] | 21158 | 0.000 | 0.3567 | No |
| 20 | THBS2 | thrombospondin 2 [Source:HGNC Symbol;Acc:HGNC:11786] | 22546 | 0.000 | 0.3192 | No |
| 21 | NCAN | neurocan [Source:HGNC Symbol;Acc:HGNC:2465] | 22584 | 0.000 | 0.3182 | No |
| 22 | CCL8 | C-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:10635] | 22723 | 0.000 | 0.3145 | No |
| 23 | CCL7 | C-C motif chemokine ligand 7 [Source:HGNC Symbol;Acc:HGNC:10634] | 22725 | 0.000 | 0.3145 | No |
| 24 | FGF9 | fibroblast growth factor 9 [Source:HGNC Symbol;Acc:HGNC:3687] | 25076 | 0.000 | 0.2511 | No |
| 25 | FGFBP1 | fibroblast growth factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19695] | 25430 | 0.000 | 0.2416 | No |
| 26 | TGFBR3 | transforming growth factor beta receptor 3 [Source:HGNC Symbol;Acc:HGNC:11774] | 27131 | 0.000 | 0.1957 | No |
| 27 | APOE | apolipoprotein E [Source:HGNC Symbol;Acc:HGNC:613] | 28316 | -0.156 | 0.2001 | No |
| 28 | FN1 | fibronectin 1 [Source:HGNC Symbol;Acc:HGNC:3778] | 28325 | -0.157 | 0.2365 | No |
