Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_LPS_versus_KO_NA.greenbergcls.cls
#KO_LPS_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetGOCC_CONDENSED_CHROMOSOME_CENTROMERIC_REGION
Enrichment Score (ES)-0.7454336
Normalized Enrichment Score (NES)-1.5614657
Nominal p-value0.0
FDR q-value0.090045184
FWER p-Value0.829
Table: GSEA Results Summary



Fig 1: Enrichment plot: GOCC_CONDENSED_CHROMOSOME_CENTROMERIC_REGION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PELI1pellino E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:8827]1133.9560.0200No
2CEBPBCCAAT enhancer binding protein beta [Source:HGNC Symbol;Acc:HGNC:1834]6392.0090.0176No
3NDEL1nudE neurodevelopment protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:17620]6941.9240.0273No
4KMT5Blysine methyltransferase 5B [Source:HGNC Symbol;Acc:HGNC:24283]9421.6140.0301No
5FBXO28F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]11691.3720.0320No
6TP53BP1tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]18600.9600.0189No
7ANAPC16anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]21650.8300.0155No
8MIS12MIS12 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:24967]22180.8100.0188No
9ZNF207zinc finger protein 207 [Source:HGNC Symbol;Acc:HGNC:12998]23480.7630.0198No
10BOD1L2biorientation of chromosomes in cell division 1 like 2 [Source:HGNC Symbol;Acc:HGNC:28505]28200.6130.0106No
11TEX14testis expressed 14, intercellular bridge forming factor [Source:HGNC Symbol;Acc:HGNC:11737]28350.6090.0138No
12HSF1heat shock transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:5224]34190.4710.0008No
13HNRNPUheterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]35620.441-0.0005No
14DCTN5dynactin subunit 5 [Source:HGNC Symbol;Acc:HGNC:24594]37040.411-0.0019No
15GPATCH11G-patch domain containing 11 [Source:HGNC Symbol;Acc:HGNC:26768]38490.385-0.0035No
16DYNC1LI1dynein cytoplasmic 1 light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:18745]42850.301-0.0135No
17CENPWcentromere protein W [Source:HGNC Symbol;Acc:HGNC:21488]43570.287-0.0138No
18CSNK1A1casein kinase 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:2451]45130.261-0.0165No
19CHAMP1chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]48740.202-0.0250No
20KANSL1KAT8 regulatory NSL complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24565]52260.149-0.0336No
21PPP1CCprotein phosphatase 1 catalytic subunit gamma [Source:HGNC Symbol;Acc:HGNC:9283]54280.118-0.0384No
22PINX1PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30046]54470.115-0.0382No
23PHF6PHD finger protein 6 [Source:HGNC Symbol;Acc:HGNC:18145]56140.091-0.0422No
24DCTN6dynactin subunit 6 [Source:HGNC Symbol;Acc:HGNC:16964]60450.027-0.0536No
25ORC2origin recognition complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:8488]61840.002-0.0573No
26DYNC1I1dynein cytoplasmic 1 intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:2963]67340.000-0.0722No
27SYCP2Lsynaptonemal complex protein 2 like [Source:HGNC Symbol;Acc:HGNC:21537]115260.000-0.2018No
28MEIKINmeiotic kinetochore factor [Source:HGNC Symbol;Acc:HGNC:51253]127790.000-0.2356No
29REC8REC8 meiotic recombination protein [Source:HGNC Symbol;Acc:HGNC:16879]136160.000-0.2582No
30KIF2Bkinesin family member 2B [Source:HGNC Symbol;Acc:HGNC:29443]175990.000-0.3659No
31CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]238140.000-0.5340No
32CENPXcentromere protein X [Source:HGNC Symbol;Acc:HGNC:11422]238350.000-0.5345No
33CENPHcentromere protein H [Source:HGNC Symbol;Acc:HGNC:17268]238400.000-0.5346No
34NSL1NSL1 component of MIS12 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24548]243500.000-0.5484No
35ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]258200.000-0.5881No
36BOD1biorientation of chromosomes in cell division 1 [Source:HGNC Symbol;Acc:HGNC:25114]27208-0.011-0.6256No
37ZNF276zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]27211-0.011-0.6255No
38NUP133nucleoporin 133 [Source:HGNC Symbol;Acc:HGNC:18016]27367-0.040-0.6295No
39CFDP1craniofacial development protein 1 [Source:HGNC Symbol;Acc:HGNC:1873]27658-0.077-0.6369No
40AHCTF1AT-hook containing transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:24618]27701-0.082-0.6376No
41BOD1L1biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792]27934-0.110-0.6432No
42ITGB3BPintegrin subunit beta 3 binding protein [Source:HGNC Symbol;Acc:HGNC:6157]28964-0.240-0.6696No
43NUDCD2NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]30100-0.394-0.6980No
44SEH1LSEH1 like nucleoporin [Source:HGNC Symbol;Acc:HGNC:30379]30511-0.455-0.7064No
45DCTN3dynactin subunit 3 [Source:HGNC Symbol;Acc:HGNC:2713]30713-0.484-0.7091No
46CENPScentromere protein S [Source:HGNC Symbol;Acc:HGNC:23163]31164-0.559-0.7180No
47HJURPHolliday junction recognition protein [Source:HGNC Symbol;Acc:HGNC:25444]31175-0.560-0.7150No
48CENPCcentromere protein C [Source:HGNC Symbol;Acc:HGNC:1854]31955-0.717-0.7318No
49DYNLT3dynein light chain Tctex-type 3 [Source:HGNC Symbol;Acc:HGNC:11694]32036-0.739-0.7297No
50SPC24SPC24 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:26913]32579-0.869-0.7393No
51SS18L1SS18L1 subunit of BAF chromatin remodeling complex [Source:HGNC Symbol;Acc:HGNC:15592]32654-0.892-0.7361No
52NUP37nucleoporin 37 [Source:HGNC Symbol;Acc:HGNC:29929]33001-0.982-0.7397Yes
53BUB3BUB3 mitotic checkpoint protein [Source:HGNC Symbol;Acc:HGNC:1151]33031-0.992-0.7347Yes
54DSN1DSN1 component of MIS12 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:16165]33041-0.994-0.7291Yes
55CENPVcentromere protein V [Source:HGNC Symbol;Acc:HGNC:29920]33232-1.056-0.7281Yes
56CENPBcentromere protein B [Source:HGNC Symbol;Acc:HGNC:1852]33632-1.187-0.7320Yes
57NUP107nucleoporin 107 [Source:HGNC Symbol;Acc:HGNC:29914]33685-1.205-0.7264Yes
58SKA2spindle and kinetochore associated complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28006]33739-1.224-0.7206Yes
59ZW10zw10 kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13194]33925-1.290-0.7181Yes
60SKA3spindle and kinetochore associated complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:20262]34187-1.385-0.7171Yes
61SPOUT1SPOUT domain containing methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26933]34203-1.392-0.7094Yes
62CLASP2cytoplasmic linker associated protein 2 [Source:HGNC Symbol;Acc:HGNC:17078]34223-1.399-0.7017Yes
63CENPTcentromere protein T [Source:HGNC Symbol;Acc:HGNC:25787]34258-1.417-0.6944Yes
64SPDL1spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]34298-1.435-0.6871Yes
65NUP43nucleoporin 43 [Source:HGNC Symbol;Acc:HGNC:21182]34469-1.507-0.6829Yes
66CENPNcentromere protein N [Source:HGNC Symbol;Acc:HGNC:30873]34575-1.544-0.6767Yes
67CLASP1cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]34601-1.556-0.6683Yes
68MEAF6MYST/Esa1 associated factor 6 [Source:HGNC Symbol;Acc:HGNC:25674]34636-1.568-0.6601Yes
69LRWD1leucine rich repeats and WD repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21769]34715-1.602-0.6528Yes
70KNTC1kinetochore associated 1 [Source:HGNC Symbol;Acc:HGNC:17255]34787-1.635-0.6452Yes
71CENPUcentromere protein U [Source:HGNC Symbol;Acc:HGNC:21348]34866-1.671-0.6376Yes
72CDT1chromatin licensing and DNA replication factor 1 [Source:HGNC Symbol;Acc:HGNC:24576]34906-1.690-0.6288Yes
73PMF1polyamine modulated factor 1 [Source:HGNC Symbol;Acc:HGNC:9112]34929-1.702-0.6194Yes
74SMC1Astructural maintenance of chromosomes 1A [Source:HGNC Symbol;Acc:HGNC:11111]35041-1.760-0.6121Yes
75ATRXATRX chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]35208-1.865-0.6058Yes
76MAD1L1mitotic arrest deficient 1 like 1 [Source:HGNC Symbol;Acc:HGNC:6762]35323-1.930-0.5976Yes
77CENPOcentromere protein O [Source:HGNC Symbol;Acc:HGNC:28152]35416-1.988-0.5885Yes
78NUP85nucleoporin 85 [Source:HGNC Symbol;Acc:HGNC:8734]35453-2.015-0.5777Yes
79CKAP5cytoskeleton associated protein 5 [Source:HGNC Symbol;Acc:HGNC:28959]35489-2.041-0.5667Yes
80MAD2L1mitotic arrest deficient 2 like 1 [Source:HGNC Symbol;Acc:HGNC:6763]35565-2.097-0.5565Yes
81ZWILCHzwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]35645-2.149-0.5461Yes
82INCENPinner centromere protein [Source:HGNC Symbol;Acc:HGNC:6058]35750-2.224-0.5359Yes
83RASSF2Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]35768-2.236-0.5233Yes
84CENPMcentromere protein M [Source:HGNC Symbol;Acc:HGNC:18352]35883-2.351-0.5127Yes
85PHF2PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]35941-2.404-0.5002Yes
86CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]36013-2.468-0.4877Yes
87ERCC6LERCC excision repair 6 like, spindle assembly checkpoint helicase [Source:HGNC Symbol;Acc:HGNC:20794]36036-2.488-0.4738Yes
88RANGAP1Ran GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9854]36039-2.489-0.4593Yes
89KNSTRNkinetochore localized astrin (SPAG5) binding protein [Source:HGNC Symbol;Acc:HGNC:30767]36145-2.594-0.4470Yes
90SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]36180-2.639-0.4326Yes
91SGO1shugoshin 1 [Source:HGNC Symbol;Acc:HGNC:25088]36189-2.647-0.4173Yes
92NDE1nudE neurodevelopment protein 1 [Source:HGNC Symbol;Acc:HGNC:17619]36191-2.648-0.4019Yes
93CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]36254-2.721-0.3877Yes
94MIS18BP1MIS18 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:20190]36268-2.738-0.3721Yes
95NCAPD3non-SMC condensin II complex subunit D3 [Source:HGNC Symbol;Acc:HGNC:28952]36353-2.855-0.3577Yes
96KMT5Clysine methyltransferase 5C [Source:HGNC Symbol;Acc:HGNC:28405]36363-2.870-0.3412Yes
97BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]36438-2.948-0.3260Yes
98SPAG5sperm associated antigen 5 [Source:HGNC Symbol;Acc:HGNC:13452]36487-3.032-0.3096Yes
99NUF2NUF2 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:14621]36488-3.032-0.2919Yes
100KNL1kinetochore scaffold 1 [Source:HGNC Symbol;Acc:HGNC:24054]36497-3.047-0.2743Yes
101NCAPGnon-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]36512-3.058-0.2569Yes
102SGO2shugoshin 2 [Source:HGNC Symbol;Acc:HGNC:30812]36517-3.064-0.2391Yes
103SKA1spindle and kinetochore associated complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28109]36519-3.064-0.2212Yes
104PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]36620-3.234-0.2051Yes
105CENPKcentromere protein K [Source:HGNC Symbol;Acc:HGNC:29479]36685-3.345-0.1873Yes
106CBX3chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]36786-3.511-0.1695Yes
107AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36797-3.534-0.1491Yes
108BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36809-3.551-0.1287Yes
109KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]36871-3.689-0.1088Yes
110CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36886-3.735-0.0874Yes
111NCAPD2non-SMC condensin I complex subunit D2 [Source:HGNC Symbol;Acc:HGNC:24305]36917-3.858-0.0657Yes
112NEK2NIMA related kinase 2 [Source:HGNC Symbol;Acc:HGNC:7745]36925-3.878-0.0433Yes
113BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]36957-3.986-0.0208Yes
114NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]37016-4.1840.0020Yes
Table: GSEA details [plain text format]



Fig 2: GOCC_CONDENSED_CHROMOSOME_CENTROMERIC_REGION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GOCC_CONDENSED_CHROMOSOME_CENTROMERIC_REGION: Random ES distribution   
Gene set null distribution of ES for GOCC_CONDENSED_CHROMOSOME_CENTROMERIC_REGION