Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#KO_LPS_versus_KO_NA.greenbergcls.cls
#KO_LPS_versus_KO_NA_repos
Phenotypegreenbergcls.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetSRC_UP.V1_DN
Enrichment Score (ES)-0.6244825
Normalized Enrichment Score (NES)-1.3360506
Nominal p-value0.0063626724
FDR q-value0.13245478
FWER p-Value0.884
Table: GSEA Results Summary



Fig 1: Enrichment plot: SRC_UP.V1_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IFIT1interferon induced protein with tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:5407]184.8590.0323No
2SERPINB2serpin family B member 2 [Source:HGNC Symbol;Acc:HGNC:8584]2703.0140.0458No
3NFKBIENFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]5032.2860.0549No
4ACSL4acyl-CoA synthetase long chain family member 4 [Source:HGNC Symbol;Acc:HGNC:3571]5062.2700.0701No
5STARD3StAR related lipid transfer domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17579]6881.9340.0783No
6POP1POP1 homolog, ribonuclease P/MRP subunit [Source:HGNC Symbol;Acc:HGNC:30129]9181.6300.0831No
7COP1COP1 E3 ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:17440]12151.3300.0840No
8IRAK2interleukin 1 receptor associated kinase 2 [Source:HGNC Symbol;Acc:HGNC:6113]15531.1160.0824No
9EIF3CLeukaryotic translation initiation factor 3 subunit C like [Source:HGNC Symbol;Acc:HGNC:26347]17141.0210.0849No
10RRN3RRN3 homolog, RNA polymerase I transcription factor [Source:HGNC Symbol;Acc:HGNC:30346]17431.0060.0910No
11ZNF436zinc finger protein 436 [Source:HGNC Symbol;Acc:HGNC:20814]20020.9000.0900No
12ZNF628zinc finger protein 628 [Source:HGNC Symbol;Acc:HGNC:28054]22950.7800.0874No
13POLR1ARNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]26770.6580.0815No
14ZNF3zinc finger protein 3 [Source:HGNC Symbol;Acc:HGNC:13089]26980.6510.0854No
15SLC12A5solute carrier family 12 member 5 [Source:HGNC Symbol;Acc:HGNC:13818]28760.5950.0846No
16RAB33BRAB33B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16075]29360.5790.0869No
17TMEM14Atransmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]29910.5660.0892No
18FANCLFA complementation group L [Source:HGNC Symbol;Acc:HGNC:20748]31570.5270.0883No
19DTWD1DTW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30926]32240.5110.0900No
20MYSM1Myb like, SWIRM and MPN domains 1 [Source:HGNC Symbol;Acc:HGNC:29401]36050.4310.0826No
21PLATplasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]36810.4140.0833No
22PCDHB4protocadherin beta 4 [Source:HGNC Symbol;Acc:HGNC:8689]37880.3960.0831No
23MEGF6multiple EGF like domains 6 [Source:HGNC Symbol;Acc:HGNC:3232]38010.3940.0855No
24MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]40860.3420.0801No
25ADGRE1adhesion G protein-coupled receptor E1 [Source:HGNC Symbol;Acc:HGNC:3336]41260.3340.0813No
26CMTR2cap methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:25635]41850.3210.0819No
27IRX5iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]43160.2940.0803No
28GON7GON7 subunit of KEOPS complex [Source:HGNC Symbol;Acc:HGNC:20356]43360.2900.0818No
29SLC2A6solute carrier family 2 member 6 [Source:HGNC Symbol;Acc:HGNC:11011]46500.2380.0749No
30IL7Rinterleukin 7 receptor [Source:HGNC Symbol;Acc:HGNC:6024]49250.1940.0688No
31MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]49690.1870.0689No
32ZNF782zinc finger protein 782 [Source:HGNC Symbol;Acc:HGNC:33110]51100.1660.0662No
33MON1AMON1 homolog A, secretory trafficking associated [Source:HGNC Symbol;Acc:HGNC:28207]52150.1510.0644No
34COMMD9COMM domain containing 9 [Source:HGNC Symbol;Acc:HGNC:25014]54010.1230.0602No
35ZNF721zinc finger protein 721 [Source:HGNC Symbol;Acc:HGNC:29425]55550.1010.0568No
36ZNF451zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]55890.0950.0565No
37GRID1glutamate ionotropic receptor delta type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4575]56380.0880.0558No
38CHAC2ChaC glutathione specific gamma-glutamylcyclotransferase 2 [Source:HGNC Symbol;Acc:HGNC:32363]58270.0610.0511No
39GDPD3glycerophosphodiester phosphodiesterase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28638]61180.0140.0434No
40C11orf72chromosome 11 putative open reading frame 72 [Source:HGNC Symbol;Acc:HGNC:26915]62430.0000.0400No
41PRSS33serine protease 33 [Source:HGNC Symbol;Acc:HGNC:30405]62700.0000.0393No
42CWH43cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]67840.0000.0254No
43DGCR11DiGeorge syndrome critical region gene 11 [Source:HGNC Symbol;Acc:HGNC:17226]68950.0000.0224No
44ARSJarylsulfatase family member J [Source:HGNC Symbol;Acc:HGNC:26286]73030.0000.0114No
45DEPP1DEPP1 autophagy regulator [Source:HGNC Symbol;Acc:HGNC:23355]79200.000-0.0053No
46WT1-ASWT1 antisense RNA [Source:HGNC Symbol;Acc:HGNC:18135]79670.000-0.0065No
47S100A9S100 calcium binding protein A9 [Source:HGNC Symbol;Acc:HGNC:10499]83560.000-0.0170No
48SH3TC2SH3 domain and tetratricopeptide repeats 2 [Source:HGNC Symbol;Acc:HGNC:29427]85860.000-0.0232No
49PRR19proline rich 19 [Source:HGNC Symbol;Acc:HGNC:33728]86180.000-0.0241No
50NPY5Rneuropeptide Y receptor Y5 [Source:HGNC Symbol;Acc:HGNC:7958]89170.000-0.0321No
51ZNF135zinc finger protein 135 [Source:HGNC Symbol;Acc:HGNC:12919]92650.000-0.0415No
52SPRR1Bsmall proline rich protein 1B [Source:HGNC Symbol;Acc:HGNC:11260]100550.000-0.0629No
53ADH4alcohol dehydrogenase 4 (class II), pi polypeptide [Source:HGNC Symbol;Acc:HGNC:252]109570.000-0.0873No
54GFRA3GDNF family receptor alpha 3 [Source:HGNC Symbol;Acc:HGNC:4245]110740.000-0.0905No
55EREGepiregulin [Source:HGNC Symbol;Acc:HGNC:3443]113400.000-0.0976No
56C17orf64chromosome 17 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:26990]115820.000-0.1042No
57LYPD3LY6/PLAUR domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24880]118740.000-0.1120No
58LINC00842long intergenic non-protein coding RNA 842 [Source:HGNC Symbol;Acc:HGNC:44989]122380.000-0.1219No
59COBLcordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]123140.000-0.1239No
60SPDYE1speedy/RINGO cell cycle regulator family member E1 [Source:HGNC Symbol;Acc:HGNC:16408]123450.000-0.1247No
61TGM5transglutaminase 5 [Source:HGNC Symbol;Acc:HGNC:11781]124660.000-0.1280No
62ZBED2zinc finger BED-type containing 2 [Source:HGNC Symbol;Acc:HGNC:20710]130200.000-0.1429No
63SYT15synaptotagmin 15 [Source:HGNC Symbol;Acc:HGNC:17167]136120.000-0.1589No
64MGARPmitochondria localized glutamic acid rich protein [Source:HGNC Symbol;Acc:HGNC:29969]136570.000-0.1601No
65NYNRINNYN domain and retroviral integrase containing [Source:HGNC Symbol;Acc:HGNC:20165]138680.000-0.1658No
66PIK3C2Gphosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma [Source:HGNC Symbol;Acc:HGNC:8973]139940.000-0.1692No
67PIK3C2Bphosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]139960.000-0.1692No
68PCDH19protocadherin 19 [Source:HGNC Symbol;Acc:HGNC:14270]145150.000-0.1833No
69TRIM73tripartite motif containing 73 [Source:HGNC Symbol;Acc:HGNC:18162]151750.000-0.2011No
70GJB6gap junction protein beta 6 [Source:HGNC Symbol;Acc:HGNC:4288]154040.000-0.2073No
71ZNF789zinc finger protein 789 [Source:HGNC Symbol;Acc:HGNC:27801]154430.000-0.2083No
72C8Bcomplement C8 beta chain [Source:HGNC Symbol;Acc:HGNC:1353]156390.000-0.2136No
73SLC7A14solute carrier family 7 member 14 [Source:HGNC Symbol;Acc:HGNC:29326]162160.000-0.2292No
74EMBembigin [Source:HGNC Symbol;Acc:HGNC:30465]163560.000-0.2330No
75SYT1synaptotagmin 1 [Source:HGNC Symbol;Acc:HGNC:11509]169470.000-0.2489No
76IVLinvolucrin [Source:HGNC Symbol;Acc:HGNC:6187]177390.000-0.2704No
77GTF2H2general transcription factor IIH subunit 2 [Source:HGNC Symbol;Acc:HGNC:4656]177510.000-0.2707No
78S1PR3sphingosine-1-phosphate receptor 3 [Source:HGNC Symbol;Acc:HGNC:3167]179040.000-0.2748No
79DPYDdihydropyrimidine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3012]180400.000-0.2784No
80MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]189990.000-0.3044No
81COL8A1collagen type VIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2215]191940.000-0.3096No
82CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]193470.000-0.3138No
83UTS2Rurotensin 2 receptor [Source:HGNC Symbol;Acc:HGNC:4468]205420.000-0.3461No
84IFI6interferon alpha inducible protein 6 [Source:HGNC Symbol;Acc:HGNC:4054]205860.000-0.3473No
85PHLDA2pleckstrin homology like domain family A member 2 [Source:HGNC Symbol;Acc:HGNC:12385]216150.000-0.3751No
86DISP2dispatched RND transporter family member 2 [Source:HGNC Symbol;Acc:HGNC:19712]235260.000-0.4268No
87CENPHcentromere protein H [Source:HGNC Symbol;Acc:HGNC:17268]238400.000-0.4353No
88ADGRF1adhesion G protein-coupled receptor F1 [Source:HGNC Symbol;Acc:HGNC:18990]241140.000-0.4427No
89FAM153Afamily with sequence similarity 153 member A [Source:HGNC Symbol;Acc:HGNC:29940]241200.000-0.4428No
90CLCA4chloride channel accessory 4 [Source:HGNC Symbol;Acc:HGNC:2018]242990.000-0.4477No
91KCNMB3potassium calcium-activated channel subfamily M regulatory beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:6287]246060.000-0.4559No
92ANHXanomalous homeobox [Source:HGNC Symbol;Acc:HGNC:40024]247440.000-0.4597No
93IFITM10interferon induced transmembrane protein 10 [Source:HGNC Symbol;Acc:HGNC:40022]247700.000-0.4603No
94ANO7anoctamin 7 [Source:HGNC Symbol;Acc:HGNC:31677]247920.000-0.4609No
95ATPSCKMTATP synthase c subunit lysine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:27029]263730.000-0.5037No
96NLRP8NLR family pyrin domain containing 8 [Source:HGNC Symbol;Acc:HGNC:22940]264280.000-0.5052No
97ST8SIA2ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10870]266440.000-0.5110No
98NOL12nucleolar protein 12 [Source:HGNC Symbol;Acc:HGNC:28585]27494-0.058-0.5336No
99COQ4coenzyme Q4 [Source:HGNC Symbol;Acc:HGNC:19693]27890-0.106-0.5436No
100PAK3p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]27968-0.115-0.5449No
101SPNS3sphingolipid transporter 3 (putative) [Source:HGNC Symbol;Acc:HGNC:28433]28084-0.127-0.5471No
102CSADcysteine sulfinic acid decarboxylase [Source:HGNC Symbol;Acc:HGNC:18966]28347-0.161-0.5531No
103OTUD6BOTU deubiquitinase 6B [Source:HGNC Symbol;Acc:HGNC:24281]28466-0.177-0.5551No
104IRGCimmunity related GTPase cinema [Source:HGNC Symbol;Acc:HGNC:28835]28593-0.195-0.5572No
105PPIL1peptidylprolyl isomerase like 1 [Source:HGNC Symbol;Acc:HGNC:9260]28641-0.199-0.5572No
106WASH3PWASP family homolog 3, pseudogene [Source:HGNC Symbol;Acc:HGNC:24362]29203-0.273-0.5705No
107STK17Bserine/threonine kinase 17b [Source:HGNC Symbol;Acc:HGNC:11396]29256-0.282-0.5700No
108TMCO2transmembrane and coiled-coil domains 2 [Source:HGNC Symbol;Acc:HGNC:23312]29375-0.298-0.5712No
109HOXB2homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]29385-0.299-0.5695No
110ABHD3abhydrolase domain containing 3, phospholipase [Source:HGNC Symbol;Acc:HGNC:18718]29560-0.319-0.5720No
111CERKLceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]29790-0.351-0.5759No
112CAPN12calpain 12 [Source:HGNC Symbol;Acc:HGNC:13249]30288-0.421-0.5865No
113CTDP1CTD phosphatase subunit 1 [Source:HGNC Symbol;Acc:HGNC:2498]31152-0.557-0.6061No
114CENPScentromere protein S [Source:HGNC Symbol;Acc:HGNC:23163]31164-0.559-0.6026No
115CDK11Bcyclin dependent kinase 11B [Source:HGNC Symbol;Acc:HGNC:1729]31191-0.562-0.5995No
116TREML1triggering receptor expressed on myeloid cells like 1 [Source:HGNC Symbol;Acc:HGNC:20434]31554-0.628-0.6051No
117NBEAL1neurobeachin like 1 [Source:HGNC Symbol;Acc:HGNC:20681]32047-0.742-0.6134No
118CA7carbonic anhydrase 7 [Source:HGNC Symbol;Acc:HGNC:1381]32456-0.841-0.6188Yes
119B3GNT3UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:13528]32545-0.861-0.6154Yes
120PTGER4prostaglandin E receptor 4 [Source:HGNC Symbol;Acc:HGNC:9596]32648-0.889-0.6122Yes
121MN1MN1 proto-oncogene, transcriptional regulator [Source:HGNC Symbol;Acc:HGNC:7180]32756-0.917-0.6089Yes
122MIR17HGmiR-17-92a-1 cluster host gene [Source:HGNC Symbol;Acc:HGNC:23564]32862-0.941-0.6054Yes
123GALNTL6polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]32869-0.943-0.5992Yes
124KIAA1841KIAA1841 [Source:HGNC Symbol;Acc:HGNC:29387]32954-0.970-0.5949Yes
125HS3ST3A1heparan sulfate-glucosamine 3-sulfotransferase 3A1 [Source:HGNC Symbol;Acc:HGNC:5196]33024-0.990-0.5901Yes
126ACTL6Aactin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]33294-1.078-0.5901Yes
127TMOD1tropomodulin 1 [Source:HGNC Symbol;Acc:HGNC:11871]33412-1.113-0.5858Yes
128DCAF17DDB1 and CUL4 associated factor 17 [Source:HGNC Symbol;Acc:HGNC:25784]33593-1.172-0.5828Yes
129CPPED1calcineurin like phosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25632]33734-1.223-0.5783Yes
130ADAadenosine deaminase [Source:HGNC Symbol;Acc:HGNC:186]33787-1.241-0.5714Yes
131CARNMT1carnosine N-methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23435]34081-1.340-0.5703Yes
132RARAretinoic acid receptor alpha [Source:HGNC Symbol;Acc:HGNC:9864]34155-1.374-0.5630Yes
133PTBP2polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]34186-1.385-0.5545Yes
134SOAT1sterol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:11177]34197-1.390-0.5454Yes
135RAP1ARAP1A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9855]34232-1.403-0.5368Yes
136RNF168ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]34491-1.514-0.5336Yes
137ARL15ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]34548-1.535-0.5248Yes
138TTC14tetratricopeptide repeat domain 14 [Source:HGNC Symbol;Acc:HGNC:24697]34598-1.554-0.5157Yes
139RNF220ring finger protein 220 [Source:HGNC Symbol;Acc:HGNC:25552]34693-1.589-0.5075Yes
140RTN4IP1reticulon 4 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18647]35152-1.829-0.5076Yes
141MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]35218-1.870-0.4967Yes
142MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]35462-2.024-0.4897Yes
143ARRDC3arrestin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29263]35505-2.053-0.4770Yes
144PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]35629-2.136-0.4659Yes
145GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]35976-2.431-0.4589Yes
146NRP1neuropilin 1 [Source:HGNC Symbol;Acc:HGNC:8004]35990-2.443-0.4428Yes
147MAP3K6mitogen-activated protein kinase kinase kinase 6 [Source:HGNC Symbol;Acc:HGNC:6858]36030-2.480-0.4271Yes
148MCM5minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]36043-2.495-0.4106Yes
149SUV39H2suppressor of variegation 3-9 homolog 2 [Source:HGNC Symbol;Acc:HGNC:17287]36067-2.516-0.3943Yes
150SEMA6Bsemaphorin 6B [Source:HGNC Symbol;Acc:HGNC:10739]36070-2.521-0.3774Yes
151EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]36195-2.657-0.3628Yes
152CDCA7cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]36231-2.691-0.3456Yes
153PCpyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]36240-2.707-0.3276Yes
154SNX32sorting nexin 32 [Source:HGNC Symbol;Acc:HGNC:26423]36292-2.772-0.3103Yes
155ATAD2ATPase family AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]36489-3.036-0.2952Yes
156UNC119unc-119 lipid binding chaperone [Source:HGNC Symbol;Acc:HGNC:12565]36521-3.066-0.2753Yes
157NID2nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]36580-3.172-0.2555Yes
158C1orf159chromosome 1 open reading frame 159 [Source:HGNC Symbol;Acc:HGNC:26062]36585-3.178-0.2342Yes
159LFNGLFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]36591-3.188-0.2129Yes
160UHRF1ubiquitin like with PHD and ring finger domains 1 [Source:HGNC Symbol;Acc:HGNC:12556]36656-3.296-0.1924Yes
161LIG1DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]36704-3.383-0.1709Yes
162RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36735-3.416-0.1487Yes
163RCBTB2RCC1 and BTB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:1914]36824-3.588-0.1269Yes
164RFTN1raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:HGNC:30278]36870-3.688-0.1032Yes
165E2F8E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]36915-3.854-0.0784Yes
166SCRN2secernin 2 [Source:HGNC Symbol;Acc:HGNC:30381]36962-4.005-0.0527Yes
167FRMD4BFERM domain containing 4B [Source:HGNC Symbol;Acc:HGNC:24886]36991-4.104-0.0258Yes
168PKP2plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]37023-4.2220.0018Yes
Table: GSEA details [plain text format]



Fig 2: SRC_UP.V1_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: SRC_UP.V1_DN: Random ES distribution   
Gene set null distribution of ES for SRC_UP.V1_DN