Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #WT_GAQ_versus_WT_NA.greenbergcls.cls #WT_GAQ_versus_WT_NA_repos |
| Phenotype | greenbergcls.cls#WT_GAQ_versus_WT_NA_repos |
| Upregulated in class | WT_GAQ |
| GeneSet | CHR13Q31 |
| Enrichment Score (ES) | 0.4398077 |
| Normalized Enrichment Score (NES) | 1.1036888 |
| Nominal p-value | 0.16666667 |
| FDR q-value | 0.6873274 |
| FWER p-Value | 1.0 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | RPL21P111 | ribosomal protein L21 pseudogene 111 [Source:HGNC Symbol;Acc:HGNC:36564] | 726 | 1.709 | 0.0814 | Yes |
| 2 | PEX12P1 | peroxisomal biogenesis factor 12 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39678] | 730 | 1.705 | 0.1821 | Yes |
| 3 | DDX6P2 | DEAD-box helicase 6 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:37806] | 1251 | 1.254 | 0.2422 | Yes |
| 4 | ARF4P4 | ADP ribosylation factor 4 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:37628] | 1551 | 1.086 | 0.2983 | Yes |
| 5 | HSPD1P8 | heat shock protein family D (Hsp60) member 1 pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:35145] | 1823 | 0.977 | 0.3488 | Yes |
| 6 | PPIAP23 | peptidylprolyl isomerase A pseudogene 23 [Source:HGNC Symbol;Acc:HGNC:39268] | 2257 | 0.799 | 0.3843 | Yes |
| 7 | SPRY2 | sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270] | 2612 | 0.692 | 0.4156 | Yes |
| 8 | NDFIP2 | Nedd4 family interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:18537] | 3395 | 0.501 | 0.4241 | Yes |
| 9 | GRPEL2P1 | GRPEL2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:41969] | 3759 | 0.432 | 0.4398 | Yes |
| 10 | HIGD1AP2 | HIG1 hypoxia inducible domain family member 1A pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:42642] | 4856 | 0.254 | 0.4252 | No |
| 11 | RBM26 | RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327] | 5507 | 0.152 | 0.4166 | No |
| 12 | UBBP5 | ubiquitin B pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:42645] | 6466 | 0.032 | 0.3926 | No |
| 13 | MIR548AS | microRNA 548as [Source:HGNC Symbol;Acc:HGNC:43550] | 7128 | 0.000 | 0.3748 | No |
| 14 | GPC6-AS2 | GPC6 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:39910] | 7259 | 0.000 | 0.3713 | No |
| 15 | GPC6-AS1 | GPC6 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:39909] | 7260 | 0.000 | 0.3713 | No |
| 16 | VENTXP2 | VENT homeobox pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:30901] | 7697 | 0.000 | 0.3595 | No |
| 17 | TET1P1 | tet methylcytosine dioxygenase 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:33586] | 7748 | 0.000 | 0.3581 | No |
| 18 | GPC5-IT1 | GPC5 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41340] | 8982 | 0.000 | 0.3248 | No |
| 19 | LINC01068 | long intergenic non-protein coding RNA 1068 [Source:HGNC Symbol;Acc:HGNC:49106] | 9297 | 0.000 | 0.3163 | No |
| 20 | LINC01047 | long intergenic non-protein coding RNA 1047 [Source:HGNC Symbol;Acc:HGNC:49041] | 9371 | 0.000 | 0.3143 | No |
| 21 | LINC01049 | long intergenic non-protein coding RNA 1049 [Source:HGNC Symbol;Acc:HGNC:49043] | 9374 | 0.000 | 0.3143 | No |
| 22 | LINC01040 | long intergenic non-protein coding RNA 1040 [Source:HGNC Symbol;Acc:HGNC:49028] | 9380 | 0.000 | 0.3142 | No |
| 23 | LINC01038 | long intergenic non-protein coding RNA 1038 [Source:HGNC Symbol;Acc:HGNC:49026] | 9394 | 0.000 | 0.3138 | No |
| 24 | RPL7L1P1 | ribosomal protein L7 like 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39455] | 9410 | 0.000 | 0.3134 | No |
| 25 | DPPA3P3 | developmental pluripotency associated 3 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:49062] | 10497 | 0.000 | 0.2840 | No |
| 26 | MOB1AP1 | MOB kinase activator 1A pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42638] | 10939 | 0.000 | 0.2721 | No |
| 27 | FABP5P4 | fatty acid binding protein 5 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:31061] | 11626 | 0.000 | 0.2536 | No |
| 28 | LINC00380 | long intergenic non-protein coding RNA 380 [Source:HGNC Symbol;Acc:HGNC:42706] | 13181 | 0.000 | 0.2116 | No |
| 29 | LINC00382 | long intergenic non-protein coding RNA 382 [Source:HGNC Symbol;Acc:HGNC:42709] | 13183 | 0.000 | 0.2116 | No |
| 30 | LINC00377 | long intergenic non-protein coding RNA 377 [Source:HGNC Symbol;Acc:HGNC:42703] | 13190 | 0.000 | 0.2114 | No |
| 31 | LINC00379 | long intergenic non-protein coding RNA 379 [Source:HGNC Symbol;Acc:HGNC:42705] | 13193 | 0.000 | 0.2113 | No |
| 32 | LINC00375 | long intergenic non-protein coding RNA 375 [Source:HGNC Symbol;Acc:HGNC:42699] | 13195 | 0.000 | 0.2113 | No |
| 33 | LINC00397 | long intergenic non-protein coding RNA 397 [Source:HGNC Symbol;Acc:HGNC:42725] | 13225 | 0.000 | 0.2105 | No |
| 34 | LINC00333 | long intergenic non-protein coding RNA 333 [Source:HGNC Symbol;Acc:HGNC:42050] | 13247 | 0.000 | 0.2100 | No |
| 35 | LINC00331 | long intergenic non-protein coding RNA 331 [Source:HGNC Symbol;Acc:HGNC:42048] | 13251 | 0.000 | 0.2099 | No |
| 36 | LINC00363 | long intergenic non-protein coding RNA 363 [Source:HGNC Symbol;Acc:HGNC:42684] | 13259 | 0.000 | 0.2097 | No |
| 37 | LINC00351 | long intergenic non-protein coding RNA 351 [Source:HGNC Symbol;Acc:HGNC:42669] | 13279 | 0.000 | 0.2092 | No |
| 38 | LINC00353 | long intergenic non-protein coding RNA 353 [Source:HGNC Symbol;Acc:HGNC:42671] | 13281 | 0.000 | 0.2092 | No |
| 39 | BRK1P2 | BRK1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:42021] | 13431 | 0.000 | 0.2051 | No |
| 40 | LINC02336 | long intergenic non-protein coding RNA 2336 [Source:HGNC Symbol;Acc:HGNC:53256] | 13844 | 0.000 | 0.1940 | No |
| 41 | TRIM60P13 | tripartite motif containing 60 pseudogene 13 [Source:HGNC Symbol;Acc:HGNC:38485] | 14771 | 0.000 | 0.1690 | No |
| 42 | RNU4ATAC3P | RNA, U4atac small nuclear 3, pseudogene [Source:HGNC Symbol;Acc:HGNC:42575] | 15263 | 0.000 | 0.1557 | No |
| 43 | RNU6-77P | RNA, U6 small nuclear 77, pseudogene [Source:HGNC Symbol;Acc:HGNC:42567] | 15419 | 0.000 | 0.1515 | No |
| 44 | RNU6-75P | RNA, U6 small nuclear 75, pseudogene [Source:HGNC Symbol;Acc:HGNC:42565] | 15434 | 0.000 | 0.1511 | No |
| 45 | NDFIP2-AS1 | NDFIP2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40844] | 15819 | 0.000 | 0.1408 | No |
| 46 | SLITRK1 | SLIT and NTRK like family member 1 [Source:HGNC Symbol;Acc:HGNC:20297] | 16330 | 0.000 | 0.1270 | No |
| 47 | SLITRK6 | SLIT and NTRK like family member 6 [Source:HGNC Symbol;Acc:HGNC:23503] | 16333 | 0.000 | 0.1269 | No |
| 48 | SLITRK5 | SLIT and NTRK like family member 5 [Source:HGNC Symbol;Acc:HGNC:20295] | 16334 | 0.000 | 0.1269 | No |
| 49 | MIR4500HG | MIR4500 host gene [Source:HGNC Symbol;Acc:HGNC:42773] | 17141 | 0.000 | 0.1051 | No |
| 50 | RBM26-AS1 | RBM26 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:39805] | 19281 | 0.000 | 0.0473 | No |
| 51 | GPC5-AS2 | GPC5 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:39887] | 19922 | 0.000 | 0.0300 | No |
| 52 | GPC5-AS1 | GPC5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:39886] | 19926 | 0.000 | 0.0300 | No |
| 53 | LIN28AP2 | LIN28A pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:38056] | 20069 | 0.000 | 0.0261 | No |
| 54 | BCAS2P3 | BCAS2 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:39596] | 21444 | 0.000 | -0.0110 | No |
| 55 | RNU6-61P | RNA, U6 small nuclear 61, pseudogene [Source:HGNC Symbol;Acc:HGNC:42551] | 21760 | 0.000 | -0.0195 | No |
| 56 | RNU6-67P | RNA, U6 small nuclear 67, pseudogene [Source:HGNC Symbol;Acc:HGNC:42557] | 21893 | 0.000 | -0.0231 | No |
| 57 | MIR622 | microRNA 622 [Source:HGNC Symbol;Acc:HGNC:32878] | 22428 | 0.000 | -0.0375 | No |
| 58 | GPC5 | glypican 5 [Source:HGNC Symbol;Acc:HGNC:4453] | 23066 | 0.000 | -0.0547 | No |
| 59 | GPC6 | glypican 6 [Source:HGNC Symbol;Acc:HGNC:4454] | 23070 | 0.000 | -0.0548 | No |
| 60 | TXNL1P1 | thioredoxin like 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39459] | 23557 | 0.000 | -0.0680 | No |
| 61 | KRT18P27 | keratin 18 pseudogene 27 [Source:HGNC Symbol;Acc:HGNC:33396] | 23596 | 0.000 | -0.0690 | No |
| 62 | LINC00560 | long intergenic non-protein coding RNA 560 [Source:HGNC Symbol;Acc:HGNC:43704] | 24042 | 0.000 | -0.0810 | No |
| 63 | LINC00559 | long intergenic non-protein coding RNA 559 [Source:HGNC Symbol;Acc:HGNC:43703] | 24055 | 0.000 | -0.0813 | No |
| 64 | LINC00564 | long intergenic non-protein coding RNA 564 [Source:HGNC Symbol;Acc:HGNC:43708] | 24207 | 0.000 | -0.0854 | No |
| 65 | AL445209.1 | novel transcript, antisense to POU4F1 | 24227 | 0.000 | -0.0859 | No |
| 66 | LINC00410 | long intergenic non-protein coding RNA 410 [Source:HGNC Symbol;Acc:HGNC:42742] | 24452 | 0.000 | -0.0920 | No |
| 67 | LINC00440 | long intergenic non-protein coding RNA 440 [Source:HGNC Symbol;Acc:HGNC:42777] | 24466 | 0.000 | -0.0923 | No |
| 68 | LINC00433 | long intergenic non-protein coding RNA 433 [Source:HGNC Symbol;Acc:HGNC:42768] | 24476 | 0.000 | -0.0926 | No |
| 69 | LINC00430 | long intergenic non-protein coding RNA 430 [Source:HGNC Symbol;Acc:HGNC:42765] | 24481 | 0.000 | -0.0927 | No |
| 70 | MTND5P3 | MT-ND5 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:42034] | 24753 | 0.000 | -0.1000 | No |
| 71 | RPL29P29 | ribosomal protein L29 pseudogene 29 [Source:HGNC Symbol;Acc:HGNC:36577] | 24810 | 0.000 | -0.1015 | No |
| 72 | HNRNPA1P31 | heterogeneous nuclear ribonucleoprotein A1 pseudogene 31 [Source:HGNC Symbol;Acc:HGNC:39549] | 25279 | 0.000 | -0.1142 | No |
| 73 | MIR4500 | microRNA 4500 [Source:HGNC Symbol;Acc:HGNC:41853] | 25434 | 0.000 | -0.1183 | No |
| 74 | RNA5SP35 | RNA, 5S ribosomal pseudogene 35 [Source:HGNC Symbol;Acc:HGNC:42611] | 26178 | 0.000 | -0.1384 | No |
| 75 | RNA5SP34 | RNA, 5S ribosomal pseudogene 34 [Source:HGNC Symbol;Acc:HGNC:42610] | 26179 | 0.000 | -0.1384 | No |
| 76 | RNA5SP33 | RNA, 5S ribosomal pseudogene 33 [Source:HGNC Symbol;Acc:HGNC:42609] | 26180 | 0.000 | -0.1384 | No |
| 77 | FAR1P1 | fatty acyl-CoA reductase 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39675] | 27706 | -0.036 | -0.1775 | No |
| 78 | UBE2D3P4 | ubiquitin conjugating enzyme E2 D3 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:39391] | 28013 | -0.069 | -0.1817 | No |
| 79 | NIPA2P5 | NIPA2 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:42045] | 28045 | -0.072 | -0.1783 | No |
| 80 | POU4F1 | POU class 4 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9218] | 28324 | -0.110 | -0.1793 | No |
| 81 | CCT5P2 | chaperonin containing TCP1 subunit 5 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:35139] | 28336 | -0.112 | -0.1730 | No |
| 82 | MIR17HG | miR-17-92a-1 cluster host gene [Source:HGNC Symbol;Acc:HGNC:23564] | 28407 | -0.121 | -0.1677 | No |
| 83 | MTND4P1 | MT-ND4 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42035] | 28462 | -0.125 | -0.1618 | No |
| 84 | PWWP2AP1 | PWWP domain containing 2A pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39709] | 28654 | -0.146 | -0.1583 | No |
| 85 | HNRNPA1P29 | heterogeneous nuclear ribonucleoprotein A1 pseudogene 29 [Source:HGNC Symbol;Acc:HGNC:39547] | 29460 | -0.247 | -0.1655 | No |
| 86 | PTMAP5 | prothymosin alpha pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:9628] | 32061 | -0.626 | -0.1987 | No |
| 87 | OBI1 | ORC ubiquitin ligase 1 [Source:HGNC Symbol;Acc:HGNC:20308] | 32334 | -0.686 | -0.1655 | No |
| 88 | SP3P | Sp3 transcription factor pseudogene [Source:HGNC Symbol;Acc:HGNC:35430] | 34365 | -1.240 | -0.1471 | No |
| 89 | GYG1P2 | glycogenin 1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39710] | 36971 | -3.734 | 0.0032 | No |
