Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #WT_GAQ_versus_WT_NA.greenbergcls.cls #WT_GAQ_versus_WT_NA_repos |
| Phenotype | greenbergcls.cls#WT_GAQ_versus_WT_NA_repos |
| Upregulated in class | WT_NA |
| GeneSet | CHR15Q13 |
| Enrichment Score (ES) | -0.70278835 |
| Normalized Enrichment Score (NES) | -1.4694569 |
| Nominal p-value | 0.0037128713 |
| FDR q-value | 0.32238895 |
| FWER p-Value | 0.511 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | PDCD6IPP2 | PDCD6IP pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:49873] | 2648 | 0.680 | -0.0283 | No |
| 2 | WHAMMP2 | WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:32360] | 4416 | 0.320 | -0.0557 | No |
| 3 | FMN1 | formin 1 [Source:HGNC Symbol;Acc:HGNC:3768] | 4766 | 0.269 | -0.0480 | No |
| 4 | ARHGAP11B | Rho GTPase activating protein 11B [Source:HGNC Symbol;Acc:HGNC:15782] | 6510 | 0.027 | -0.0934 | No |
| 5 | SCG5 | secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816] | 6919 | 0.000 | -0.1044 | No |
| 6 | RN7SL238P | RNA, 7SL, cytoplasmic 238, pseudogene [Source:HGNC Symbol;Acc:HGNC:46254] | 6976 | 0.000 | -0.1059 | No |
| 7 | GREM1 | gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001] | 8573 | 0.000 | -0.1490 | No |
| 8 | DNM1P50 | dynamin 1 pseudogene 50 [Source:HGNC Symbol;Acc:HGNC:48499] | 9282 | 0.000 | -0.1682 | No |
| 9 | DNM1P30 | dynamin 1 pseudogene 30 [Source:HGNC Symbol;Acc:HGNC:35177] | 9361 | 0.000 | -0.1703 | No |
| 10 | DNM1P28 | dynamin 1 pseudogene 28 [Source:HGNC Symbol;Acc:HGNC:35175] | 9375 | 0.000 | -0.1706 | No |
| 11 | DNM1P31 | dynamin 1 pseudogene 31 [Source:HGNC Symbol;Acc:HGNC:35178] | 9388 | 0.000 | -0.1709 | No |
| 12 | DNM1P32 | dynamin 1 pseudogene 32 [Source:HGNC Symbol;Acc:HGNC:35179] | 9389 | 0.000 | -0.1709 | No |
| 13 | HERC2P9 | hect domain and RLD 2 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:30495] | 11456 | 0.000 | -0.2268 | No |
| 14 | RN7SL673P | RNA, 7SL, cytoplasmic 673, pseudogene [Source:HGNC Symbol;Acc:HGNC:46689] | 12271 | 0.000 | -0.2488 | No |
| 15 | GOLGA6L7 | golgin A6 family like 7 [Source:HGNC Symbol;Acc:HGNC:37442] | 13014 | 0.000 | -0.2688 | No |
| 16 | AC091057.1 | OTU deubiquitinase 7A pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:100288637] | 13038 | 0.000 | -0.2694 | No |
| 17 | CHRFAM7A | CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion [Source:HGNC Symbol;Acc:HGNC:15781] | 13416 | 0.000 | -0.2796 | No |
| 18 | TJP1 | tight junction protein 1 [Source:HGNC Symbol;Acc:HGNC:11827] | 13652 | 0.000 | -0.2860 | No |
| 19 | LINC02256 | long intergenic non-protein coding RNA 2256 [Source:HGNC Symbol;Acc:HGNC:53157] | 14028 | 0.000 | -0.2961 | No |
| 20 | LINC02249 | long intergenic non-protein coding RNA 2249 [Source:HGNC Symbol;Acc:HGNC:32351] | 14043 | 0.000 | -0.2965 | No |
| 21 | ULK4P1 | ULK4 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:15775] | 14660 | 0.000 | -0.3131 | No |
| 22 | ULK4P3 | ULK4 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:15777] | 14662 | 0.000 | -0.3131 | No |
| 23 | ULK4P2 | ULK4 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:15776] | 14663 | 0.000 | -0.3131 | No |
| 24 | TMCO5B | transmembrane and coiled-coil domains 5B (pseudogene) [Source:HGNC Symbol;Acc:HGNC:34243] | 14698 | 0.000 | -0.3141 | No |
| 25 | RN7SL185P | RNA, 7SL, cytoplasmic 185, pseudogene [Source:HGNC Symbol;Acc:HGNC:46201] | 14722 | 0.000 | -0.3147 | No |
| 26 | RN7SL196P | RNA, 7SL, cytoplasmic 196, pseudogene [Source:HGNC Symbol;Acc:HGNC:46212] | 15128 | 0.000 | -0.3256 | No |
| 27 | LINC02352 | long intergenic non-protein coding RNA 2352 [Source:HGNC Symbol;Acc:HGNC:53274] | 15221 | 0.000 | -0.3281 | No |
| 28 | GOLGA8UP | golgin A8 family member U, pseudogene [Source:HGNC Symbol;Acc:HGNC:44411] | 15332 | 0.000 | -0.3311 | No |
| 29 | HERC2P11 | hect domain and RLD 2 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:49882] | 15933 | 0.000 | -0.3473 | No |
| 30 | ABCB10P4 | ABCB10 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:31130] | 16295 | 0.000 | -0.3570 | No |
| 31 | ABCB10P3 | ABCB10 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:31129] | 16296 | 0.000 | -0.3570 | No |
| 32 | FAM189A1 | family with sequence similarity 189 member A1 [Source:HGNC Symbol;Acc:HGNC:29075] | 17359 | 0.000 | -0.3857 | No |
| 33 | RN7SL539P | RNA, 7SL, cytoplasmic 539, pseudogene [Source:HGNC Symbol;Acc:HGNC:46555] | 17679 | 0.000 | -0.3944 | No |
| 34 | RN7SL796P | RNA, 7SL, cytoplasmic 796, pseudogene [Source:HGNC Symbol;Acc:HGNC:46812] | 17774 | 0.000 | -0.3969 | No |
| 35 | MIR4509-3 | microRNA 4509-3 [Source:HGNC Symbol;Acc:HGNC:41610] | 19534 | 0.000 | -0.4444 | No |
| 36 | MIR4509-2 | microRNA 4509-2 [Source:HGNC Symbol;Acc:HGNC:41537] | 19535 | 0.000 | -0.4444 | No |
| 37 | RNU6-466P | RNA, U6 small nuclear 466, pseudogene [Source:HGNC Symbol;Acc:HGNC:47429] | 20556 | 0.000 | -0.4720 | No |
| 38 | RN7SL82P | RNA, 7SL, cytoplasmic 82, pseudogene [Source:HGNC Symbol;Acc:HGNC:46098] | 20595 | 0.000 | -0.4730 | No |
| 39 | MIR211 | microRNA 211 [Source:HGNC Symbol;Acc:HGNC:31588] | 20922 | 0.000 | -0.4818 | No |
| 40 | RN7SL628P | RNA, 7SL, cytoplasmic 628, pseudogene [Source:HGNC Symbol;Acc:HGNC:46644] | 21455 | 0.000 | -0.4962 | No |
| 41 | RNU6-18P | RNA, U6 small nuclear 18, pseudogene [Source:HGNC Symbol;Acc:HGNC:34262] | 23011 | 0.000 | -0.5382 | No |
| 42 | RNU6-17P | RNA, U6 small nuclear 17, pseudogene [Source:HGNC Symbol;Acc:HGNC:34261] | 23036 | 0.000 | -0.5388 | No |
| 43 | AC012236.1 | uncharacterized LOC283710 [Source:NCBI gene (formerly Entrezgene);Acc:283710] | 23628 | 0.000 | -0.5548 | No |
| 44 | RN7SL286P | RNA, 7SL, cytoplasmic 286, pseudogene [Source:HGNC Symbol;Acc:HGNC:46302] | 23848 | 0.000 | -0.5607 | No |
| 45 | RN7SL469P | RNA, 7SL, cytoplasmic 469, pseudogene [Source:HGNC Symbol;Acc:HGNC:46485] | 24399 | 0.000 | -0.5756 | No |
| 46 | GOLGA8R | golgin A8 family member R [Source:HGNC Symbol;Acc:HGNC:44407] | 24547 | 0.000 | -0.5796 | No |
| 47 | GOLGA8T | golgin A8 family member T [Source:HGNC Symbol;Acc:HGNC:44410] | 24549 | 0.000 | -0.5796 | No |
| 48 | GOLGA8K | golgin A8 family member K [Source:HGNC Symbol;Acc:HGNC:38652] | 24552 | 0.000 | -0.5796 | No |
| 49 | GOLGA8J | golgin A8 family member J [Source:HGNC Symbol;Acc:HGNC:38650] | 24553 | 0.000 | -0.5796 | No |
| 50 | GOLGA8M | golgin A8 family member M [Source:HGNC Symbol;Acc:HGNC:44404] | 24554 | 0.000 | -0.5796 | No |
| 51 | GOLGA8O | golgin A8 family member O [Source:HGNC Symbol;Acc:HGNC:44406] | 24555 | 0.000 | -0.5796 | No |
| 52 | GOLGA8N | golgin A8 family member N [Source:HGNC Symbol;Acc:HGNC:44405] | 24556 | 0.000 | -0.5796 | No |
| 53 | GOLGA8Q | golgin A8 family member Q [Source:HGNC Symbol;Acc:HGNC:44408] | 24557 | 0.000 | -0.5796 | No |
| 54 | GOLGA8G | golgin A8 family member G [Source:HGNC Symbol;Acc:HGNC:25328] | 24560 | 0.000 | -0.5797 | No |
| 55 | GOLGA8F | golgin A8 family member F [Source:HGNC Symbol;Acc:HGNC:32378] | 24563 | 0.000 | -0.5797 | No |
| 56 | GOLGA8H | golgin A8 family member H [Source:HGNC Symbol;Acc:HGNC:37443] | 24564 | 0.000 | -0.5797 | No |
| 57 | CHRNA7 | cholinergic receptor nicotinic alpha 7 subunit [Source:HGNC Symbol;Acc:HGNC:1960] | 24792 | 0.000 | -0.5859 | No |
| 58 | OCA2 | OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101] | 26070 | 0.000 | -0.6204 | No |
| 59 | AC022613.1 | novel transcript, antisense to TJP1 | 26167 | 0.000 | -0.6230 | No |
| 60 | RN7SL719P | RNA, 7SL, cytoplasmic 719, pseudogene [Source:HGNC Symbol;Acc:HGNC:46735] | 26870 | 0.000 | -0.6419 | No |
| 61 | APBA2 | amyloid beta precursor protein binding family A member 2 [Source:HGNC Symbol;Acc:HGNC:579] | 27917 | -0.062 | -0.6663 | No |
| 62 | FAN1 | FANCD2 and FANCI associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170] | 28257 | -0.102 | -0.6689 | No |
| 63 | RYR3 | ryanodine receptor 3 [Source:HGNC Symbol;Acc:HGNC:10485] | 28667 | -0.146 | -0.6707 | No |
| 64 | HMGN2P5 | high mobility group nucleosomal binding domain 2 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:33568] | 29398 | -0.238 | -0.6752 | Yes |
| 65 | OTUD7A | OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718] | 29459 | -0.247 | -0.6612 | Yes |
| 66 | NCAPGP2 | non-SMC condensin I complex subunit G pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:51905] | 31000 | -0.454 | -0.6739 | Yes |
| 67 | HERC2P10 | hect domain and RLD 2 pseudogene 10 [Source:HGNC Symbol;Acc:HGNC:39056] | 31208 | -0.486 | -0.6486 | Yes |
| 68 | RPL5P32 | ribosomal protein L5 pseudogene 32 [Source:HGNC Symbol;Acc:HGNC:36973] | 31910 | -0.595 | -0.6297 | Yes |
| 69 | HNRNPA1P71 | heterogeneous nuclear ribonucleoprotein A1 pseudogene 71 [Source:HGNC Symbol;Acc:HGNC:48801] | 32147 | -0.641 | -0.5954 | Yes |
| 70 | NSMCE3 | NSE3 homolog, SMC5-SMC6 complex component [Source:HGNC Symbol;Acc:HGNC:7677] | 32504 | -0.722 | -0.5591 | Yes |
| 71 | HERC2 | HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:4868] | 32924 | -0.823 | -0.5180 | Yes |
| 72 | RPL41P2 | ribosomal protein L41 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:10357] | 33593 | -1.000 | -0.4725 | Yes |
| 73 | MTMR10 | myotubularin related protein 10 [Source:HGNC Symbol;Acc:HGNC:25999] | 33818 | -1.060 | -0.4111 | Yes |
| 74 | ARHGAP11A | Rho GTPase activating protein 11A [Source:HGNC Symbol;Acc:HGNC:15783] | 33954 | -1.099 | -0.3449 | Yes |
| 75 | TRPM1 | transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146] | 34155 | -1.163 | -0.2764 | Yes |
| 76 | KLF13 | Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672] | 35079 | -1.560 | -0.2021 | Yes |
| 77 | UBE2CP4 | ubiquitin conjugating enzyme E2 C pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:43553] | 35714 | -1.936 | -0.0961 | Yes |
| 78 | TUBBP8 | tubulin beta class I pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:42179] | 35915 | -2.095 | 0.0317 | Yes |
