Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #WT_GAQ_versus_WT_NA.greenbergcls.cls #WT_GAQ_versus_WT_NA_repos |
| Phenotype | greenbergcls.cls#WT_GAQ_versus_WT_NA_repos |
| Upregulated in class | WT_NA |
| GeneSet | CHR17Q22 |
| Enrichment Score (ES) | -0.64960545 |
| Normalized Enrichment Score (NES) | -1.3568547 |
| Nominal p-value | 0.024360536 |
| FDR q-value | 0.3781696 |
| FWER p-Value | 0.992 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | TRIM25 | tripartite motif containing 25 [Source:HGNC Symbol;Acc:HGNC:12932] | 364 | 2.441 | 0.0570 | No |
| 2 | SMG8 | SMG8 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:25551] | 1417 | 1.141 | 0.0599 | No |
| 3 | SRSF1 | serine and arginine rich splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:10780] | 2488 | 0.728 | 0.0509 | No |
| 4 | CUEDC1 | CUE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:31350] | 2500 | 0.725 | 0.0704 | No |
| 5 | VEZF1 | vascular endothelial zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:12949] | 2620 | 0.688 | 0.0861 | No |
| 6 | GARS1P1 | glycyl-tRNA synthetase 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:50480] | 3403 | 0.498 | 0.0786 | No |
| 7 | TSPOAP1-AS1 | TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44148] | 4903 | 0.245 | 0.0448 | No |
| 8 | SETP3 | SET pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:31115] | 5737 | 0.123 | 0.0257 | No |
| 9 | HSF5 | heat shock transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:26862] | 6335 | 0.048 | 0.0109 | No |
| 10 | COX11 | cytochrome c oxidase copper chaperone COX11 [Source:HGNC Symbol;Acc:HGNC:2261] | 6507 | 0.027 | 0.0070 | No |
| 11 | RNU2-58P | RNA, U2 small nuclear 58, pseudogene [Source:HGNC Symbol;Acc:HGNC:48551] | 7927 | 0.000 | -0.0314 | No |
| 12 | SEPTIN4-AS1 | SEPTIN4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51345] | 9162 | 0.000 | -0.0647 | No |
| 13 | RNU6-518P | RNA, U6 small nuclear 518, pseudogene [Source:HGNC Symbol;Acc:HGNC:47481] | 10260 | 0.000 | -0.0943 | No |
| 14 | RN7SL449P | RNA, 7SL, cytoplasmic 449, pseudogene [Source:HGNC Symbol;Acc:HGNC:46465] | 10775 | 0.000 | -0.1082 | No |
| 15 | RNU1-108P | RNA, U1 small nuclear 108, pseudogene [Source:HGNC Symbol;Acc:HGNC:48450] | 10785 | 0.000 | -0.1085 | No |
| 16 | RNU7-134P | RNA, U7 small nuclear 134 pseudogene [Source:HGNC Symbol;Acc:HGNC:45668] | 10807 | 0.000 | -0.1090 | No |
| 17 | SNRPGP17 | small nuclear ribonucleoprotein polypeptide G pseudogene 17 [Source:HGNC Symbol;Acc:HGNC:49372] | 11263 | 0.000 | -0.1213 | No |
| 18 | SEPTIN4 | septin 4 [Source:HGNC Symbol;Acc:HGNC:9165] | 12004 | 0.000 | -0.1413 | No |
| 19 | C17orf67 | chromosome 17 open reading frame 67 [Source:HGNC Symbol;Acc:HGNC:27900] | 12009 | 0.000 | -0.1414 | No |
| 20 | AC015813.3 | novel transcript | 12778 | 0.000 | -0.1622 | No |
| 21 | SPDYE22P | speedy/RINGO cell cycle regulator family member E22, pseudogene [Source:HGNC Symbol;Acc:HGNC:51518] | 13222 | 0.000 | -0.1741 | No |
| 22 | LINC02876 | long intergenic non-protein coding RNA 2876 [Source:HGNC Symbol;Acc:HGNC:42963] | 13529 | 0.000 | -0.1824 | No |
| 23 | OR4D2 | olfactory receptor family 4 subfamily D member 2 [Source:HGNC Symbol;Acc:HGNC:8294] | 14421 | 0.000 | -0.2065 | No |
| 24 | OR4D1 | olfactory receptor family 4 subfamily D member 1 [Source:HGNC Symbol;Acc:HGNC:8293] | 14422 | 0.000 | -0.2065 | No |
| 25 | MIR301A | microRNA 301a [Source:HGNC Symbol;Acc:HGNC:31622] | 15560 | 0.000 | -0.2372 | No |
| 26 | EPX | eosinophil peroxidase [Source:HGNC Symbol;Acc:HGNC:3423] | 16562 | 0.000 | -0.2642 | No |
| 27 | RNF43 | ring finger protein 43 [Source:HGNC Symbol;Acc:HGNC:18505] | 16568 | 0.000 | -0.2644 | No |
| 28 | RNVU1-34 | RNA, variant U1 small nuclear 34 [Source:HGNC Symbol;Acc:HGNC:48427] | 16648 | 0.000 | -0.2665 | No |
| 29 | AC007431.2 | novel transcript, antisense to MSI2 | 17126 | 0.000 | -0.2794 | No |
| 30 | AC007431.1 | novel transcript, antisense to MSI2 | 17129 | 0.000 | -0.2795 | No |
| 31 | KIF2B | kinesin family member 2B [Source:HGNC Symbol;Acc:HGNC:29443] | 17699 | 0.000 | -0.2948 | No |
| 32 | ANKFN1 | ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766] | 18299 | 0.000 | -0.3110 | No |
| 33 | RN7SKP14 | RN7SK pseudogene 14 [Source:HGNC Symbol;Acc:HGNC:45738] | 18602 | 0.000 | -0.3192 | No |
| 34 | LPO | lactoperoxidase [Source:HGNC Symbol;Acc:HGNC:6678] | 18681 | 0.000 | -0.3213 | No |
| 35 | RN7SKP94 | RN7SK pseudogene 94 [Source:HGNC Symbol;Acc:HGNC:45818] | 18714 | 0.000 | -0.3221 | No |
| 36 | MPO | myeloperoxidase [Source:HGNC Symbol;Acc:HGNC:7218] | 19014 | 0.000 | -0.3302 | No |
| 37 | NOG | noggin [Source:HGNC Symbol;Acc:HGNC:7866] | 19324 | 0.000 | -0.3386 | No |
| 38 | ISCA1P3 | iron-sulfur cluster assembly 1 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:38024] | 19749 | 0.000 | -0.3500 | No |
| 39 | AC005962.2 | novel transcript, antisense to MKS1 | 20237 | 0.000 | -0.3632 | No |
| 40 | LINC01982 | long intergenic non-protein coding RNA 1982 [Source:HGNC Symbol;Acc:HGNC:52812] | 20354 | 0.000 | -0.3663 | No |
| 41 | LINC02089 | long intergenic non-protein coding RNA 2089 [Source:HGNC Symbol;Acc:HGNC:52940] | 21649 | 0.000 | -0.4013 | No |
| 42 | MIR454 | microRNA 454 [Source:HGNC Symbol;Acc:HGNC:33137] | 21739 | 0.000 | -0.4037 | No |
| 43 | CA10 | carbonic anhydrase 10 [Source:HGNC Symbol;Acc:HGNC:1369] | 21978 | 0.000 | -0.4101 | No |
| 44 | MIR3614 | microRNA 3614 [Source:HGNC Symbol;Acc:HGNC:38995] | 22433 | 0.000 | -0.4224 | No |
| 45 | RNU6-1158P | RNA, U6 small nuclear 1158, pseudogene [Source:HGNC Symbol;Acc:HGNC:48121] | 22890 | 0.000 | -0.4347 | No |
| 46 | RNU1-52P | RNA, U1 small nuclear 52, pseudogene [Source:HGNC Symbol;Acc:HGNC:48394] | 25309 | 0.000 | -0.5000 | No |
| 47 | CCDC182 | coiled-coil domain containing 182 [Source:HGNC Symbol;Acc:HGNC:49392] | 25993 | 0.000 | -0.5185 | No |
| 48 | RNU6-1249P | RNA, U6 small nuclear 1249, pseudogene [Source:HGNC Symbol;Acc:HGNC:48212] | 26217 | 0.000 | -0.5245 | No |
| 49 | RN7SL716P | RNA, 7SL, cytoplasmic 716, pseudogene [Source:HGNC Symbol;Acc:HGNC:46732] | 26902 | 0.000 | -0.5430 | No |
| 50 | MIR4729 | microRNA 4729 [Source:HGNC Symbol;Acc:HGNC:41585] | 27185 | 0.000 | -0.5506 | No |
| 51 | MIR4736 | microRNA 4736 [Source:HGNC Symbol;Acc:HGNC:41804] | 27190 | 0.000 | -0.5507 | No |
| 52 | GDPD1 | glycerophosphodiester phosphodiesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20883] | 27509 | -0.005 | -0.5592 | No |
| 53 | SUPT4H1 | SPT4 homolog, DSIF elongation factor subunit [Source:HGNC Symbol;Acc:HGNC:11467] | 27761 | -0.040 | -0.5648 | No |
| 54 | COIL | coilin [Source:HGNC Symbol;Acc:HGNC:2184] | 28052 | -0.073 | -0.5707 | No |
| 55 | HLF | HLF transcription factor, PAR bZIP family member [Source:HGNC Symbol;Acc:HGNC:4977] | 28255 | -0.102 | -0.5733 | No |
| 56 | TMEM100 | transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607] | 29368 | -0.234 | -0.5970 | No |
| 57 | TEX14 | testis expressed 14, intercellular bridge forming factor [Source:HGNC Symbol;Acc:HGNC:11737] | 29756 | -0.283 | -0.5997 | No |
| 58 | MTCO1P40 | MT-CO1 pseudogene 40 [Source:HGNC Symbol;Acc:HGNC:52105] | 30914 | -0.439 | -0.6189 | No |
| 59 | DGKE | diacylglycerol kinase epsilon [Source:HGNC Symbol;Acc:HGNC:2852] | 32050 | -0.625 | -0.6325 | Yes |
| 60 | STXBP4 | syntaxin binding protein 4 [Source:HGNC Symbol;Acc:HGNC:19694] | 32131 | -0.638 | -0.6172 | Yes |
| 61 | SKA2 | spindle and kinetochore associated complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28006] | 32324 | -0.683 | -0.6037 | Yes |
| 62 | PCTP | phosphatidylcholine transfer protein [Source:HGNC Symbol;Acc:HGNC:8752] | 32367 | -0.692 | -0.5859 | Yes |
| 63 | MRPS23 | mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509] | 32499 | -0.721 | -0.5697 | Yes |
| 64 | AKAP1 | A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367] | 33034 | -0.851 | -0.5608 | Yes |
| 65 | SCPEP1 | serine carboxypeptidase 1 [Source:HGNC Symbol;Acc:HGNC:29507] | 34168 | -1.167 | -0.5595 | Yes |
| 66 | RNF126P1 | ring finger protein 126 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:30340] | 34381 | -1.245 | -0.5311 | Yes |
| 67 | DYNLL2 | dynein light chain LC8-type 2 [Source:HGNC Symbol;Acc:HGNC:24596] | 34434 | -1.265 | -0.4978 | Yes |
| 68 | MKS1 | MKS transition zone complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:7121] | 34553 | -1.316 | -0.4650 | Yes |
| 69 | YPEL2 | yippee like 2 [Source:HGNC Symbol;Acc:HGNC:18326] | 34655 | -1.351 | -0.4307 | Yes |
| 70 | MSI2 | musashi RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:18585] | 34782 | -1.410 | -0.3955 | Yes |
| 71 | PRR11 | proline rich 11 [Source:HGNC Symbol;Acc:HGNC:25619] | 34834 | -1.438 | -0.3575 | Yes |
| 72 | MTMR4 | myotubularin related protein 4 [Source:HGNC Symbol;Acc:HGNC:7452] | 34994 | -1.510 | -0.3205 | Yes |
| 73 | MMD | monocyte to macrophage differentiation associated [Source:HGNC Symbol;Acc:HGNC:7153] | 35326 | -1.687 | -0.2832 | Yes |
| 74 | PPM1E | protein phosphatase, Mg2+/Mn2+ dependent 1E [Source:HGNC Symbol;Acc:HGNC:19322] | 35736 | -1.949 | -0.2409 | Yes |
| 75 | RAD51C | RAD51 paralog C [Source:HGNC Symbol;Acc:HGNC:9820] | 36081 | -2.221 | -0.1894 | Yes |
| 76 | TOM1L1 | target of myb1 like 1 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11983] | 36335 | -2.464 | -0.1287 | Yes |
| 77 | TSPOAP1 | TSPO associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16831] | 36495 | -2.674 | -0.0598 | Yes |
| 78 | TRIM37 | tripartite motif containing 37 [Source:HGNC Symbol;Acc:HGNC:7523] | 36557 | -2.769 | 0.0144 | Yes |
