Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_GAQ_versus_WT_NA.greenbergcls.cls
#WT_GAQ_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetCHR20P11
Enrichment Score (ES)-0.64248496
Normalized Enrichment Score (NES)-1.395699
Nominal p-value0.0089988755
FDR q-value0.2907433
FWER p-Value0.929
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR20P11   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SEC23BSEC23 homolog B, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10702]14841.112-0.0091No
2EIF4E2P1eukaryotic translation initiation factor 4E family member 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16237]22620.797-0.0079No
3CFAP61cilia and flagella associated protein 61 [Source:HGNC Symbol;Acc:HGNC:15872]28350.627-0.0059No
4NAA20N-alpha-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]36120.458-0.0141No
5CSTL1cystatin like 1 [Source:HGNC Symbol;Acc:HGNC:15958]42880.341-0.0229No
6PPIAP2peptidylprolyl isomerase A pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:16542]45000.309-0.0200No
7EEF1A1P34eukaryotic translation elongation factor 1 alpha 1 pseudogene 34 [Source:HGNC Symbol;Acc:HGNC:37912]46770.284-0.0168No
8DZANK1double zinc ribbon and ankyrin repeat domains 1 [Source:HGNC Symbol;Acc:HGNC:15858]47310.275-0.0106No
9MRPS11P1mitochondrial ribosomal protein S11 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16584]47730.268-0.0042No
10RPL21P3ribosomal protein L21 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:16533]52830.187-0.0127No
11POLR3FRNA polymerase III subunit F [Source:HGNC Symbol;Acc:HGNC:15763]53750.173-0.0104No
12XRN25'-3' exoribonuclease 2 [Source:HGNC Symbol;Acc:HGNC:12836]55760.143-0.0118No
13NXT1nuclear transport factor 2 like export factor 1 [Source:HGNC Symbol;Acc:HGNC:15913]57810.117-0.0140No
14PET117PET117 cytochrome c oxidase chaperone [Source:HGNC Symbol;Acc:HGNC:40045]60140.085-0.0179No
15RALGAPA2Ral GTPase activating protein catalytic subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:16207]66610.005-0.0352No
16PTMAP3prothymosin alpha pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:9626]66700.005-0.0353No
17LINC01431long intergenic non-protein coding RNA 1431 [Source:HGNC Symbol;Acc:HGNC:50744]71020.000-0.0470No
18LINC01427long intergenic non-protein coding RNA 1427 [Source:HGNC Symbol;Acc:HGNC:50737]71120.000-0.0472No
19LINC01432long intergenic non-protein coding RNA 1432 [Source:HGNC Symbol;Acc:HGNC:50745]71730.000-0.0488No
20RNU2-56PRNA, U2 small nuclear 56, pseudogene [Source:HGNC Symbol;Acc:HGNC:48549]79090.000-0.0687No
21RNU6-192PRNA, U6 small nuclear 192, pseudogene [Source:HGNC Symbol;Acc:HGNC:47155]82670.000-0.0784No
22KIZ-AS1KIZ antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51231]87220.000-0.0907No
23ZNF133zinc finger protein 133 [Source:HGNC Symbol;Acc:HGNC:12917]97040.000-0.1172No
24BSNDP2BSND pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:51537]100070.000-0.1254No
25BSNDP1BSND pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:51536]100090.000-0.1254No
26BSNDP3BSND pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:51538]100120.000-0.1255No
27RN7SL690PRNA, 7SL, cytoplasmic 690, pseudogene [Source:HGNC Symbol;Acc:HGNC:46706]100320.000-0.1260No
28AL133464.1novel transcript103270.000-0.1339No
29KRT18P3keratin 18 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:16540]105640.000-0.1403No
30RNU7-137PRNA, U7 small nuclear 137 pseudogene [Source:HGNC Symbol;Acc:HGNC:45671]107250.000-0.1447No
31SCP2D1-AS1SCP2D1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:16210]108650.000-0.1484No
32OVOL2ovo like zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:15804]110020.000-0.1521No
33FAM182Bfamily with sequence similarity 182 member B [Source:HGNC Symbol;Acc:HGNC:34503]110240.000-0.1527No
34FAM182Afamily with sequence similarity 182 member A [Source:HGNC Symbol;Acc:HGNC:16222]110250.000-0.1527No
35GGTLC1gamma-glutamyltransferase light chain 1 [Source:HGNC Symbol;Acc:HGNC:16437]111560.000-0.1562No
36GAPDHP53glyceraldehyde 3 phosphate dehydrogenase pseudogene 53 [Source:HGNC Symbol;Acc:HGNC:38559]111660.000-0.1564No
37SSTR4somatostatin receptor 4 [Source:HGNC Symbol;Acc:HGNC:11333]118880.000-0.1759No
38LNCNEFlncRNA neighboring enhancer of FOXA2 [Source:HGNC Symbol;Acc:HGNC:50656]119940.000-0.1788No
39AL035252.2novel transcript127090.000-0.1981No
40VN1R108Pvomeronasal 1 receptor 108 pseudogene [Source:HGNC Symbol;Acc:HGNC:37432]128190.000-0.2011No
41SLC25A6P1solute carrier family 25 member 6 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16554]129910.000-0.2057No
42CST13Pcystatin 13, pseudogene [Source:HGNC Symbol;Acc:HGNC:44335]131840.000-0.2109No
43CST12Pcystatin 12, pseudogene [Source:HGNC Symbol;Acc:HGNC:31920]133460.000-0.2152No
44LINC00261long intergenic non-protein coding RNA 261 [Source:HGNC Symbol;Acc:HGNC:16189]134630.000-0.2184No
45LINC00237long intergenic non-protein coding RNA 237 [Source:HGNC Symbol;Acc:HGNC:38166]135660.000-0.2211No
46VSX1visual system homeobox 1 [Source:HGNC Symbol;Acc:HGNC:12723]148180.000-0.2550No
47PAX1paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]149970.000-0.2598No
48RN7SL607PRNA, 7SL, cytoplasmic 607, pseudogene [Source:HGNC Symbol;Acc:HGNC:46623]154540.000-0.2721No
49ZNF337-AS1ZNF337 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40759]163930.000-0.2975No
50RN7SL594PRNA, 7SL, cytoplasmic 594, pseudogene [Source:HGNC Symbol;Acc:HGNC:46610]165120.000-0.3007No
51RNU6ATAC17PRNA, U6atac small nuclear 17, pseudogene [Source:HGNC Symbol;Acc:HGNC:46916]170760.000-0.3159No
52SCP2D1SCP2 sterol binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16211]172400.000-0.3204No
53RNA5SP477RNA, 5S ribosomal pseudogene 477 [Source:HGNC Symbol;Acc:HGNC:43377]174340.000-0.3256No
54RNA5SP476RNA, 5S ribosomal pseudogene 476 [Source:HGNC Symbol;Acc:HGNC:43376]174350.000-0.3256No
55RNA5SP479RNA, 5S ribosomal pseudogene 479 [Source:HGNC Symbol;Acc:HGNC:43379]174390.000-0.3257No
56RNA5SP478RNA, 5S ribosomal pseudogene 478 [Source:HGNC Symbol;Acc:HGNC:43378]174400.000-0.3257No
57GCNT1P1glucosaminyl (N-acetyl) transferase 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16532]175030.000-0.3273No
58RNU6ATAC34PRNA, U6atac small nuclear 34, pseudogene [Source:HGNC Symbol;Acc:HGNC:46933]175340.000-0.3282No
59CST11cystatin 11 [Source:HGNC Symbol;Acc:HGNC:15959]181550.000-0.3449No
60NKX2-2-AS1NKX2-2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:37154]182760.000-0.3482No
61CSTP2cystatin pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:2487]184530.000-0.3529No
62CSTP1cystatin pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:2486]184540.000-0.3529No
63RN7SL14PRNA, 7SL, cytoplasmic 14, pseudogene [Source:HGNC Symbol;Acc:HGNC:46030]185730.000-0.3561No
64CST9Lcystatin 9 like [Source:HGNC Symbol;Acc:HGNC:16233]187330.000-0.3604No
65RN7SKP74RN7SK pseudogene 74 [Source:HGNC Symbol;Acc:HGNC:45798]187790.000-0.3617No
66NKX2-4NK2 homeobox 4 [Source:HGNC Symbol;Acc:HGNC:7837]191860.000-0.3726No
67NKX2-2NK2 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:7835]191880.000-0.3727No
68DUXAP7double homeobox A pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:32186]192910.000-0.3754No
69SMIM26small integral membrane protein 26 [Source:HGNC Symbol;Acc:HGNC:43430]196820.000-0.3860No
70CST2P1cystatin SA pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:45042]197130.000-0.3868No
71LINC01747long intergenic non-protein coding RNA 1747 [Source:HGNC Symbol;Acc:HGNC:52536]198380.000-0.3901No
72LINC01733long intergenic non-protein coding RNA 1733 [Source:HGNC Symbol;Acc:HGNC:52521]198550.000-0.3906No
73LINC01727long intergenic non-protein coding RNA 1727 [Source:HGNC Symbol;Acc:HGNC:52515]199230.000-0.3924No
74LINC01726long intergenic non-protein coding RNA 1726 [Source:HGNC Symbol;Acc:HGNC:52514]199240.000-0.3924No
75LINC01721long intergenic non-protein coding RNA 1721 [Source:HGNC Symbol;Acc:HGNC:52508]199330.000-0.3926No
76LLPHP1LLPH pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:50491]202220.000-0.4004No
77RN7SKP140RN7SK pseudogene 140 [Source:HGNC Symbol;Acc:HGNC:45864]203960.000-0.4051No
78MIR3192microRNA 3192 [Source:HGNC Symbol;Acc:HGNC:38202]212020.000-0.4269No
79INSM1INSM transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:6090]218910.000-0.4455No
80RN7SL638PRNA, 7SL, cytoplasmic 638, pseudogene [Source:HGNC Symbol;Acc:HGNC:46654]219150.000-0.4461No
81SYNDIG1synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]221170.000-0.4515No
82POM121L3PPOM121 transmembrane nucleoporin like 3, pseudogene [Source:HGNC Symbol;Acc:HGNC:16440]221550.000-0.4525No
83SNORD17small nucleolar RNA, C/D box 17 [Source:HGNC Symbol;Acc:HGNC:32713]223100.000-0.4567No
84MIR663AHGMIR663A host gene [Source:HGNC Symbol;Acc:HGNC:27662]224430.000-0.4603No
85ZNF337zinc finger protein 337 [Source:HGNC Symbol;Acc:HGNC:15809]224870.000-0.4614No
86RPL41P1ribosomal protein L41 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:10356]225360.000-0.4627No
87LINC00851long intergenic non-protein coding RNA 851 [Source:HGNC Symbol;Acc:HGNC:43424]231800.000-0.4801No
88FOXA2forkhead box A2 [Source:HGNC Symbol;Acc:HGNC:5022]236960.000-0.4941No
89ZNF877Pzinc finger protein 877, pseudogene [Source:HGNC Symbol;Acc:HGNC:38697]238270.000-0.4976No
90CST9cystatin 9 [Source:HGNC Symbol;Acc:HGNC:13261]247300.000-0.5220No
91CST8cystatin 8 [Source:HGNC Symbol;Acc:HGNC:2480]247310.000-0.5220No
92CST5cystatin D [Source:HGNC Symbol;Acc:HGNC:2477]247340.000-0.5221No
93CST4cystatin S [Source:HGNC Symbol;Acc:HGNC:2476]247350.000-0.5221No
94CST3cystatin C [Source:HGNC Symbol;Acc:HGNC:2475]247360.000-0.5221No
95CST2cystatin SA [Source:HGNC Symbol;Acc:HGNC:2474]247370.000-0.5221No
96CST1cystatin SN [Source:HGNC Symbol;Acc:HGNC:2473]247380.000-0.5221No
97LINC00656long intergenic non-protein coding RNA 656 [Source:HGNC Symbol;Acc:HGNC:27304]251900.000-0.5343No
98LINC00652long intergenic non-protein coding RNA 652 [Source:HGNC Symbol;Acc:HGNC:25003]251920.000-0.5343No
99RNU1-23PRNA, U1 small nuclear 23, pseudogene [Source:HGNC Symbol;Acc:HGNC:41964]257600.000-0.5496No
100AL118508.1novel transcript258590.000-0.5523No
101CST9LP1cystatin 9-like pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39552]261930.000-0.5613No
102CST9LP2cystatin 9-like pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:44337]261940.000-0.5613No
103RNU6-1257PRNA, U6 small nuclear 1257, pseudogene [Source:HGNC Symbol;Acc:HGNC:48220]264770.000-0.5689No
104CFTRP1CFTR pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16182]272590.000-0.5901No
105THBDthrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784]27809-0.047-0.6036No
106RPS15AP1ribosomal protein S15a pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16598]28174-0.091-0.6109No
107MED28P7mediator complex subunit 28 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:45084]28326-0.110-0.6119No
108RPL15P1ribosomal protein L15 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16583]28509-0.130-0.6132No
109RPL24P2ribosomal protein L24 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:16597]29049-0.194-0.6224No
110CD93CD93 molecule [Source:HGNC Symbol;Acc:HGNC:15855]29306-0.225-0.6230No
111GSTM3P1glutathione S-transferase mu 3 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16606]30027-0.316-0.6337Yes
112NCOR1P1NCOR1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16724]30352-0.357-0.6325Yes
113RPS19P1ribosomal protein S19 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16534]30555-0.386-0.6271Yes
114APMAPadipocyte plasma membrane associated protein [Source:HGNC Symbol;Acc:HGNC:13238]30556-0.386-0.6164Yes
115KAT14lysine acetyltransferase 14 [Source:HGNC Symbol;Acc:HGNC:15904]30668-0.402-0.6081Yes
116CRNKL1crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]30698-0.407-0.5976Yes
117RPL12P12ribosomal protein L12 pseudogene 12 [Source:HGNC Symbol;Acc:HGNC:15951]31923-0.598-0.6140Yes
118NINLninein like [Source:HGNC Symbol;Acc:HGNC:29163]32248-0.664-0.6043Yes
119NAPBNSF attachment protein beta [Source:HGNC Symbol;Acc:HGNC:15751]32409-0.701-0.5890Yes
120ACSS1acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]32427-0.706-0.5698Yes
121CYB5AP4cytochrome b5 type A pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:2575]32442-0.710-0.5504Yes
122MGME1mitochondrial genome maintenance exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:16205]32633-0.753-0.5345Yes
123RPL17P1ribosomal protein L17 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16559]32668-0.761-0.5142Yes
124CST7cystatin F [Source:HGNC Symbol;Acc:HGNC:2479]32820-0.798-0.4960Yes
125SNX5sorting nexin 5 [Source:HGNC Symbol;Acc:HGNC:14969]32890-0.813-0.4752Yes
126GZF1GDNF inducible zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:15808]33148-0.878-0.4576Yes
127RBBP9RB binding protein 9, serine hydrolase [Source:HGNC Symbol;Acc:HGNC:9892]33912-1.085-0.4480Yes
128SLC24A3solute carrier family 24 member 3 [Source:HGNC Symbol;Acc:HGNC:10977]34072-1.136-0.4206Yes
129NANPN-acetylneuraminic acid phosphatase [Source:HGNC Symbol;Acc:HGNC:16140]34666-1.356-0.3988Yes
130DTD1D-aminoacyl-tRNA deacylase 1 [Source:HGNC Symbol;Acc:HGNC:16219]34772-1.406-0.3624Yes
131ENTPD6ectonucleoside triphosphate diphosphohydrolase 6 [Source:HGNC Symbol;Acc:HGNC:3368]35493-1.788-0.3320Yes
132GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]35614-1.860-0.2833Yes
133ABHD12abhydrolase domain containing 12, lysophospholipase [Source:HGNC Symbol;Acc:HGNC:15868]35886-2.066-0.2330Yes
134KIZkizuna centrosomal protein [Source:HGNC Symbol;Acc:HGNC:15865]36671-2.948-0.1719Yes
135PYGBglycogen phosphorylase B [Source:HGNC Symbol;Acc:HGNC:9723]36750-3.087-0.0879Yes
136RIN2Ras and Rab interactor 2 [Source:HGNC Symbol;Acc:HGNC:18750]36896-3.4790.0052Yes
Table: GSEA details [plain text format]



Fig 2: CHR20P11   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR20P11: Random ES distribution   
Gene set null distribution of ES for CHR20P11