Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_GAQ_versus_WT_NA.greenbergcls.cls
#WT_GAQ_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetCHR2Q11
Enrichment Score (ES)0.54216534
Normalized Enrichment Score (NES)1.4219698
Nominal p-value0.0
FDR q-value0.33424556
FWER p-Value0.562
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR2Q11   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1DUSP2dual specificity phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:3068]304.4830.1096Yes
2SEMA4Csemaphorin 4C [Source:HGNC Symbol;Acc:HGNC:10731]1323.3650.1897Yes
3ARID5AAT-rich interaction domain 5A [Source:HGNC Symbol;Acc:HGNC:17361]2142.9510.2602Yes
4MITD1microtubule interacting and trafficking domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25207]3462.4780.3177Yes
5RNF149ring finger protein 149 [Source:HGNC Symbol;Acc:HGNC:23137]4682.1630.3677Yes
6ITPRIPL1ITPRIP like 1 [Source:HGNC Symbol;Acc:HGNC:29371]5741.9710.4134Yes
7TMEM127transmembrane protein 127 [Source:HGNC Symbol;Acc:HGNC:26038]9411.4850.4401Yes
8HMGN2P22high mobility group nucleosomal binding domain 2 pseudogene 22 [Source:HGNC Symbol;Acc:HGNC:39387]11911.2990.4653Yes
9TXNDC9thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]12841.2260.4930Yes
10BBIP1P1BBSome interacting protein 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:52781]17621.0010.5048Yes
11EIF5Beukaryotic translation initiation factor 5B [Source:HGNC Symbol;Acc:HGNC:30793]26750.6690.4966Yes
12CNNM4cyclin and CBS domain divalent metal cation transport mediator 4 [Source:HGNC Symbol;Acc:HGNC:105]32640.5300.4937Yes
13KANSL3KAT8 regulatory NSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25473]33660.5070.5035Yes
14CNOT11CCR4-NOT transcription complex subunit 11 [Source:HGNC Symbol;Acc:HGNC:25217]39460.3980.4976Yes
15FABP7P2fatty acid binding protein 7 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:41952]39980.3890.5058Yes
16SNORD89small nucleolar RNA, C/D box 89 [Source:HGNC Symbol;Acc:HGNC:32750]41140.3710.5118Yes
17ATP5F1BP1ATP synthase F1 subunit beta pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:831]41440.3660.5201Yes
18YWHAQP5YWHAQ pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:37684]42140.3550.5269Yes
19CIAO1cytosolic iron-sulfur assembly component 1 [Source:HGNC Symbol;Acc:HGNC:14280]42560.3470.5344Yes
20RFX8RFX family member 8, lacking RFX DNA binding domain [Source:HGNC Symbol;Acc:HGNC:37253]42800.3420.5422Yes
21TMEM131transmembrane protein 131 [Source:HGNC Symbol;Acc:HGNC:30366]47010.2800.5377No
22NEURL3neuralized E3 ubiquitin protein ligase 3 [Source:HGNC Symbol;Acc:HGNC:25162]49640.2370.5365No
23ACTR1Bactin related protein 1B [Source:HGNC Symbol;Acc:HGNC:168]50610.2210.5393No
24ZAP70zeta chain of T cell receptor associated protein kinase 70 [Source:HGNC Symbol;Acc:HGNC:12858]54200.1670.5337No
25MTCO1P48MT-CO1 pseudogene 48 [Source:HGNC Symbol;Acc:HGNC:52113]54310.1650.5375No
26MGAT4Aalpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:HGNC Symbol;Acc:HGNC:7047]55580.1460.5377No
27TSGA10testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]57970.1140.5341No
28CRACDLCRACD like [Source:HGNC Symbol;Acc:HGNC:33454]59530.0930.5322No
29FAHD2Afumarylacetoacetate hydrolase domain containing 2A [Source:HGNC Symbol;Acc:HGNC:24252]60510.0820.5316No
30CREG2cellular repressor of E1A stimulated genes 2 [Source:HGNC Symbol;Acc:HGNC:14272]64800.0310.5208No
31COA5cytochrome c oxidase assembly factor 5 [Source:HGNC Symbol;Acc:HGNC:33848]65430.0220.5196No
32RPS24P6ribosomal protein S24 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:36240]66440.0080.5171No
33COX5Bcytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]66460.0080.5173No
34LONRF2LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]75170.0000.4937No
35AC013270.1novel transcript75970.0000.4916No
36ANKRD36ankyrin repeat domain 36 [Source:HGNC Symbol;Acc:HGNC:24079]80270.0000.4800No
37ASTLastacin like metalloendopeptidase [Source:HGNC Symbol;Acc:HGNC:31704]81770.0000.4760No
38PROM2prominin 2 [Source:HGNC Symbol;Acc:HGNC:20685]86050.0000.4644No
39OR7E102Polfactory receptor family 7 subfamily E member 102 pseudogene [Source:HGNC Symbol;Acc:HGNC:15043]86760.0000.4625No
40TBC1D8-AS1TBC1D8 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:52782]90820.0000.4516No
41LINC01104long intergenic non-protein coding RNA 1104 [Source:HGNC Symbol;Acc:HGNC:49226]92130.0000.4480No
42IGKV3OR2-5immunoglobulin kappa variable 3/OR2-5 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5832]94120.0000.4427No
43FER1L5fer-1 like family member 5 [Source:HGNC Symbol;Acc:HGNC:19044]96270.0000.4369No
44LYG1lysozyme g1 [Source:HGNC Symbol;Acc:HGNC:27014]96970.0000.4350No
45LYG2lysozyme g2 [Source:HGNC Symbol;Acc:HGNC:29615]96980.0000.4350No
46TRIM43CPtripartite motif containing 43C, pseudogene [Source:HGNC Symbol;Acc:HGNC:43981]98730.0000.4303No
47IGKV1OR2-6immunoglobulin kappa variable 1/OR2-6 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5770]102200.0000.4210No
48IGKV1OR2-9immunoglobulin kappa variable 1/OR2-9 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5771]102240.0000.4209No
49IGKV1OR2-3immunoglobulin kappa variable 1/OR2-3 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5769]102310.0000.4207No
50FAM178Bfamily with sequence similarity 178 member B [Source:HGNC Symbol;Acc:HGNC:28036]108090.0000.4051No
51ANKRD20A8Pankyrin repeat domain 20 family member A8, pseudogene [Source:HGNC Symbol;Acc:HGNC:23666]112690.0000.3927No
52RNU4-84PRNA, U4 small nuclear 84, pseudogene [Source:HGNC Symbol;Acc:HGNC:47020]114410.0000.3881No
53RNU6-1320PRNA, U6 small nuclear 1320, pseudogene [Source:HGNC Symbol;Acc:HGNC:48283]117590.0000.3795No
54SLC2AXP1solute carrier family 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:31077]118480.0000.3771No
55AFF3AF4/FMR2 family member 3 [Source:HGNC Symbol;Acc:HGNC:6473]118730.0000.3764No
56LINC00342long intergenic non-protein coding RNA 342 [Source:HGNC Symbol;Acc:HGNC:42470]132370.0000.3396No
57MTCO3P45MT-CO3 pseudogene 45 [Source:HGNC Symbol;Acc:HGNC:52148]142800.0000.3114No
58RNU7-46PRNA, U7 small nuclear 46 pseudogene [Source:HGNC Symbol;Acc:HGNC:34142]150260.0000.2912No
59TRIM43tripartite motif containing 43 [Source:HGNC Symbol;Acc:HGNC:19015]154780.0000.2790No
60MIR5696microRNA 5696 [Source:HGNC Symbol;Acc:HGNC:43516]155500.0000.2771No
61CNN2P8calponin 2 pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:39533]156190.0000.2753No
62RN7SL575PRNA, 7SL, cytoplasmic 575, pseudogene [Source:HGNC Symbol;Acc:HGNC:46591]158790.0000.2682No
63IL1R1interleukin 1 receptor type 1 [Source:HGNC Symbol;Acc:HGNC:5993]160040.0000.2649No
64IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]160050.0000.2649No
65RN7SL313PRNA, 7SL, cytoplasmic 313, pseudogene [Source:HGNC Symbol;Acc:HGNC:46329]164120.0000.2539No
66ADRA2Badrenoceptor alpha 2B [Source:HGNC Symbol;Acc:HGNC:282]166020.0000.2488No
67AC097374.1pseudogene similar to part of asparagine synthetase (ASNS)172420.0000.2315No
68AL845331.1putative aquaporin-7-like protein 3 [Source:NCBI gene (formerly Entrezgene);Acc:100509620]177270.0000.2184No
69ANKRD36Cankyrin repeat domain 36C [Source:HGNC Symbol;Acc:HGNC:32946]178550.0000.2150No
70ANKRD36Bankyrin repeat domain 36B [Source:HGNC Symbol;Acc:HGNC:29333]178610.0000.2148No
71STARD7-AS1STARD7 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40827]182570.0000.2042No
72IGKV1OR2-11immunoglobulin kappa variable 1/OR2-11 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5768]184110.0000.2000No
73IGKV2OR2-7Dimmunoglobulin kappa variable 2/OR2-7D (pseudogene) [Source:HGNC Symbol;Acc:HGNC:37489]185290.0000.1968No
74IGKV2OR2-10immunoglobulin kappa variable 2/OR2-10 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5806]185750.0000.1956No
75MALmal, T cell differentiation protein [Source:HGNC Symbol;Acc:HGNC:6817]188890.0000.1872No
76RNA5SP101RNA, 5S ribosomal pseudogene 101 [Source:HGNC Symbol;Acc:HGNC:42899]190040.0000.1841No
77NMSneuromedin S [Source:HGNC Symbol;Acc:HGNC:32203]193120.0000.1758No
78NANOGNBP1NANOGNB pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42158]193790.0000.1740No
79LINC01870long intergenic non-protein coding RNA 1870 [Source:HGNC Symbol;Acc:HGNC:52689]194880.0000.1711No
80LINC01868long intergenic non-protein coding RNA 1868 [Source:HGNC Symbol;Acc:HGNC:52688]194950.0000.1709No
81LINC01849long intergenic non-protein coding RNA 1849 [Source:HGNC Symbol;Acc:HGNC:52665]195930.0000.1683No
82TEKT4tektin 4 [Source:HGNC Symbol;Acc:HGNC:31012]197720.0000.1635No
83GPAT2P2glycerol-3-phosphate acyltransferase 2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:52331]199590.0000.1584No
84GPAT2P1glycerol-3-phosphate acyltransferase 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:52330]199630.0000.1583No
85RNU7-96PRNA, U7 small nuclear 96 pseudogene [Source:HGNC Symbol;Acc:HGNC:45630]207920.0000.1359No
86MIR3127microRNA 3127 [Source:HGNC Symbol;Acc:HGNC:38269]210590.0000.1287No
87RNU4-8PRNA, U4 small nuclear 8, pseudogene [Source:HGNC Symbol;Acc:HGNC:10195]212760.0000.1229No
88VWA3Bvon Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]213740.0000.1203No
89C2orf92chromosome 2 open reading frame 92 [Source:HGNC Symbol;Acc:HGNC:49272]214250.0000.1189No
90C2orf15chromosome 2 open reading frame 15 [Source:HGNC Symbol;Acc:HGNC:28436]215500.0000.1156No
91TRIM64FPtripartite motif containing 64F, pseudogene [Source:HGNC Symbol;Acc:HGNC:43976]216690.0000.1124No
92ZNF514zinc finger protein 514 [Source:HGNC Symbol;Acc:HGNC:25894]218720.0000.1069No
93CYP4F32Pcytochrome P450 family 4 subfamily F member 32, pseudogene [Source:HGNC Symbol;Acc:HGNC:39951]228120.0000.0815No
94KCNIP3potassium voltage-gated channel interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:15523]238960.0000.0522No
95UBTFL3UBTF like 3 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:35402]239890.0000.0497No
96UBTFL6UBTF like 6 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:35406]239920.0000.0497No
97UBTFL5UBTF like 5 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:35405]239930.0000.0497No
98RN7SL210PRNA, 7SL, cytoplasmic 210, pseudogene [Source:HGNC Symbol;Acc:HGNC:46226]240480.0000.0482No
99HMGN1P36high mobility group nucleosome binding domain 1 pseudogene 36 [Source:HGNC Symbol;Acc:HGNC:39380]250080.0000.0223No
100TRIM43Btripartite motif containing 43B [Source:HGNC Symbol;Acc:HGNC:37146]250280.0000.0217No
101GPAT2glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:27168]254120.0000.0114No
102TRIM51JPtripartite motif-containing 51J, pseudogene [Source:HGNC Symbol;Acc:HGNC:43978]260540.000-0.0060No
103CNN2P11calponin 2 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:39536]268830.000-0.0284No
104IGKV2OR2-2immunoglobulin kappa variable 2/OR2-2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5808]269460.000-0.0300No
105IGKV2OR2-1immunoglobulin kappa variable 2/OR2-1 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5805]269480.000-0.0301No
106IGKV2OR2-8immunoglobulin kappa variable 2/OR2-8 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5811]269600.000-0.0304No
107IGKV2OR2-7immunoglobulin kappa variable 2/OR2-7 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5810]269610.000-0.0304No
108MRPS5mitochondrial ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:14498]27714-0.037-0.0498No
109ANKRD23ankyrin repeat domain 23 [Source:HGNC Symbol;Acc:HGNC:24470]27804-0.046-0.0511No
110NPAS2neuronal PAS domain protein 2 [Source:HGNC Symbol;Acc:HGNC:7895]27821-0.049-0.0503No
111FAHD2Bfumarylacetoacetate hydrolase domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25318]28017-0.069-0.0539No
112CNGA3cyclic nucleotide gated channel subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:2150]28079-0.076-0.0537No
113ZNF2zinc finger protein 2 [Source:HGNC Symbol;Acc:HGNC:12991]28093-0.080-0.0521No
114MAP4K4mitogen-activated protein kinase kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6866]28215-0.096-0.0530No
115ANKRD39ankyrin repeat domain 39 [Source:HGNC Symbol;Acc:HGNC:28640]28321-0.110-0.0531No
116PDCL3phosducin like 3 [Source:HGNC Symbol;Acc:HGNC:28860]28392-0.119-0.0521No
117SNX18P14sorting nexin 18 pseudogene 14 [Source:HGNC Symbol;Acc:HGNC:39622]28604-0.140-0.0543No
118UNC50unc-50 inner nuclear membrane RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16046]29431-0.242-0.0707No
119MRPL30mitochondrial ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:14036]29599-0.265-0.0687No
120RPL31ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]30333-0.355-0.0798No
121SNRNP200small nuclear ribonucleoprotein U5 subunit 200 [Source:HGNC Symbol;Acc:HGNC:30859]30473-0.375-0.0743No
122REV1REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060]31329-0.503-0.0851No
123LMAN2Llectin, mannose binding 2 like [Source:HGNC Symbol;Acc:HGNC:19263]31616-0.551-0.0792No
124FAHD2CPfumarylacetoacetate hydrolase domain containing 2C, pseudogene [Source:HGNC Symbol;Acc:HGNC:44135]31650-0.556-0.0664No
125TBC1D8TBC1 domain family member 8 [Source:HGNC Symbol;Acc:HGNC:17791]32459-0.713-0.0707No
126CHST10carbohydrate sulfotransferase 10 [Source:HGNC Symbol;Acc:HGNC:19650]32810-0.795-0.0606No
127LIPT1lipoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:29569]34119-1.148-0.0677No
128STARD7StAR related lipid transfer domain containing 7 [Source:HGNC Symbol;Acc:HGNC:18063]34152-1.162-0.0400No
129INPP4Ainositol polyphosphate-4-phosphatase type I A [Source:HGNC Symbol;Acc:HGNC:6074]34286-1.210-0.0138No
130CNNM3cyclin and CBS domain divalent metal cation transport mediator 3 [Source:HGNC Symbol;Acc:HGNC:104]34611-1.3350.0104No
131NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36164-2.3010.0251No
Table: GSEA details [plain text format]



Fig 2: CHR2Q11   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR2Q11: Random ES distribution   
Gene set null distribution of ES for CHR2Q11