Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_GAQ_versus_WT_NA.greenbergcls.cls
#WT_GAQ_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetCHR2Q31
Enrichment Score (ES)-0.6044161
Normalized Enrichment Score (NES)-1.3281984
Nominal p-value0.01814059
FDR q-value0.40690127
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR2Q31   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1DHRS9dehydrogenase/reductase 9 [Source:HGNC Symbol;Acc:HGNC:16888]3712.4260.0264No
2SLC25A12solute carrier family 25 member 12 [Source:HGNC Symbol;Acc:HGNC:10982]17101.0210.0056No
3MAP3K20mitogen-activated protein kinase kinase kinase 20 [Source:HGNC Symbol;Acc:HGNC:17797]19280.9270.0136No
4LNPKlunapark, ER junction formation factor [Source:HGNC Symbol;Acc:HGNC:21610]25370.7130.0079No
5PHOSPHO2phosphatase, orphan 2 [Source:HGNC Symbol;Acc:HGNC:28316]27700.6460.0114No
6EIF2S2P4eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:37626]27720.6460.0210No
7NFE2L2nuclear factor, erythroid 2 like 2 [Source:HGNC Symbol;Acc:HGNC:7782]30480.5770.0223No
8CHN1chimerin 1 [Source:HGNC Symbol;Acc:HGNC:1943]32490.5330.0249No
9PPIGpeptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]33600.5100.0296No
10CCDC141coiled-coil domain containing 141 [Source:HGNC Symbol;Acc:HGNC:26821]33750.5050.0368No
11FTH1P20ferritin heavy chain 1 pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:37639]34600.4870.0418No
12GORASP2golgi reassembly stacking protein 2 [Source:HGNC Symbol;Acc:HGNC:17500]38300.4180.0382No
13KLHL41kelch like family member 41 [Source:HGNC Symbol;Acc:HGNC:16905]39380.3990.0413No
14RAPGEF4Rap guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:16626]39990.3890.0455No
15METTL5methyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:25006]40080.3880.0511No
16ATP5MC3ATP synthase membrane subunit c locus 3 [Source:HGNC Symbol;Acc:HGNC:843]43000.3390.0483No
17DYNC1I2dynein cytoplasmic 1 intermediate chain 2 [Source:HGNC Symbol;Acc:HGNC:2964]44310.3180.0496No
18MTX2metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]44850.3110.0528No
19CWC22CWC22 spliceosome associated protein homolog [Source:HGNC Symbol;Acc:HGNC:29322]45420.3010.0558No
20ATF2activating transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:784]46110.2930.0584No
21ITPRID2ITPR interacting domain containing 2 [Source:HGNC Symbol;Acc:HGNC:11319]46650.2850.0613No
22HMGB1P4high mobility group box 1 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:4996]48850.2490.0591No
23AGPSalkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]53150.1830.0502No
24SSBsmall RNA binding exonuclease protection factor La [Source:HGNC Symbol;Acc:HGNC:11316]53250.1820.0527No
25PLEKHA3pleckstrin homology domain containing A3 [Source:HGNC Symbol;Acc:HGNC:14338]54130.1670.0529No
26RPL5P7ribosomal protein L5 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:36583]59920.0880.0386No
27MAP3K20-AS1MAP3K20 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27935]61010.0760.0368No
28HNRNPA1P39heterogeneous nuclear ribonucleoprotein A1 pseudogene 39 [Source:HGNC Symbol;Acc:HGNC:48768]62670.0550.0331No
29ABCB11ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]63780.0420.0308No
30RNU5E-9PRNA, U5E small nuclear 9, pseudogene [Source:HGNC Symbol;Acc:HGNC:42532]68160.0000.0190No
31LINC01305long intergenic non-protein coding RNA 1305 [Source:HGNC Symbol;Acc:HGNC:27690]73960.0000.0033No
32RNU6-187PRNA, U6 small nuclear 187, pseudogene [Source:HGNC Symbol;Acc:HGNC:47150]78570.000-0.0092No
33RNU6-182PRNA, U6 small nuclear 182, pseudogene [Source:HGNC Symbol;Acc:HGNC:47145]79030.000-0.0104No
34MIR4444-1microRNA 4444-1 [Source:HGNC Symbol;Acc:HGNC:41710]88960.000-0.0372No
35HOXD1homeobox D1 [Source:HGNC Symbol;Acc:HGNC:5132]91430.000-0.0439No
36HOXD4homeobox D4 [Source:HGNC Symbol;Acc:HGNC:5138]91760.000-0.0447No
37HOXD3homeobox D3 [Source:HGNC Symbol;Acc:HGNC:5137]91770.000-0.0447No
38HOXD9homeobox D9 [Source:HGNC Symbol;Acc:HGNC:5140]91800.000-0.0448No
39HOXD8homeobox D8 [Source:HGNC Symbol;Acc:HGNC:5139]91810.000-0.0448No
40LINC01124long intergenic non-protein coding RNA 1124 [Source:HGNC Symbol;Acc:HGNC:49270]92320.000-0.0461No
41LINC01117long intergenic non-protein coding RNA 1117 [Source:HGNC Symbol;Acc:HGNC:49260]92420.000-0.0464No
42LINC01116long intergenic non-protein coding RNA 1116 [Source:HGNC Symbol;Acc:HGNC:49259]92470.000-0.0465No
43PJVKpejvakin [Source:HGNC Symbol;Acc:HGNC:29502]98230.000-0.0621No
44RNU6-5PRNA, U6 small nuclear 5, pseudogene [Source:HGNC Symbol;Acc:HGNC:34249]99250.000-0.0648No
45ALDH7A1P2aldehyde dehydrogenase 7 family member A1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:879]101130.000-0.0699No
46RNU7-104PRNA, U7 small nuclear 104 pseudogene [Source:HGNC Symbol;Acc:HGNC:45638]105180.000-0.0808No
47PDE11Aphosphodiesterase 11A [Source:HGNC Symbol;Acc:HGNC:8773]105970.000-0.0829No
48AC019080.1novel transcript107960.000-0.0883No
49SCHLAP1SWI/SNF complex antagonist associated with prostate cancer 1 [Source:HGNC Symbol;Acc:HGNC:48603]112960.000-0.1018No
50RNU6-763PRNA, U6 small nuclear 763, pseudogene [Source:HGNC Symbol;Acc:HGNC:47726]115970.000-0.1099No
51UBE2V1P6ubiquitin conjugating enzyme E2 V1 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:44889]116970.000-0.1126No
52FUCA1P1alpha-L-fucosidase 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:4007]121340.000-0.1244No
53CYCTPcytochrome c, testis, pseudogene [Source:HGNC Symbol;Acc:HGNC:24424]124210.000-0.1321No
54G6PC2glucose-6-phosphatase catalytic subunit 2 [Source:HGNC Symbol;Acc:HGNC:28906]126200.000-0.1375No
55SP5Sp5 transcription factor [Source:HGNC Symbol;Acc:HGNC:14529]126250.000-0.1376No
56ITGA6-AS1ITGA6 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40308]127640.000-0.1413No
57TTNtitin [Source:HGNC Symbol;Acc:HGNC:12403]129320.000-0.1458No
58HOXD13homeobox D13 [Source:HGNC Symbol;Acc:HGNC:5136]134340.000-0.1594No
59HOXD12homeobox D12 [Source:HGNC Symbol;Acc:HGNC:5135]134350.000-0.1594No
60HOXD11homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]134370.000-0.1594No
61HOXD10homeobox D10 [Source:HGNC Symbol;Acc:HGNC:5133]134390.000-0.1594No
62MIR1258microRNA 1258 [Source:HGNC Symbol;Acc:HGNC:35323]135640.000-0.1628No
63AC073636.1novel transcript157170.000-0.2210No
64KRT8P40keratin 8 pseudogene 40 [Source:HGNC Symbol;Acc:HGNC:39874]165520.000-0.2436No
65RAPGEF4-AS1RAPGEF4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:28081]168210.000-0.2508No
66DLX2distal-less homeobox 2 [Source:HGNC Symbol;Acc:HGNC:2915]168460.000-0.2515No
67RNU6ATAC19PRNA, U6atac small nuclear 19, pseudogene [Source:HGNC Symbol;Acc:HGNC:46918]169090.000-0.2532No
68RNU6ATAC14PRNA, U6atac small nuclear 14, pseudogene [Source:HGNC Symbol;Acc:HGNC:46913]170150.000-0.2560No
69PPP1R1Cprotein phosphatase 1 regulatory inhibitor subunit 1C [Source:HGNC Symbol;Acc:HGNC:14940]176720.000-0.2738No
70RNU6-629PRNA, U6 small nuclear 629, pseudogene [Source:HGNC Symbol;Acc:HGNC:47592]176970.000-0.2744No
71DLX2-DTDLX2 divergent transcript [Source:HGNC Symbol;Acc:HGNC:50638]179390.000-0.2809No
72OSBPL6oxysterol binding protein like 6 [Source:HGNC Symbol;Acc:HGNC:16388]184880.000-0.2958No
73RNA5SP113RNA, 5S ribosomal pseudogene 113 [Source:HGNC Symbol;Acc:HGNC:42911]190460.000-0.3108No
74RNA5SP112RNA, 5S ribosomal pseudogene 112 [Source:HGNC Symbol;Acc:HGNC:42910]190480.000-0.3109No
75HOXD-AS2HOXD cluster antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:43756]191530.000-0.3137No
76NEUROD1neuronal differentiation 1 [Source:HGNC Symbol;Acc:HGNC:7762]192400.000-0.3160No
77RN7SL65PRNA, 7SL, cytoplasmic 65, pseudogene [Source:HGNC Symbol;Acc:HGNC:46081]199570.000-0.3354No
78HAGLRHOXD antisense growth-associated long non-coding RNA [Source:HGNC Symbol;Acc:HGNC:43755]201560.000-0.3408No
79LINC01934long intergenic non-protein coding RNA 1934 [Source:HGNC Symbol;Acc:HGNC:52757]204890.000-0.3497No
80LINC01960long intergenic non-protein coding RNA 1960 [Source:HGNC Symbol;Acc:HGNC:52785]205180.000-0.3505No
81PTCHD3P2patched domain containing 3 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:44946]207080.000-0.3556No
82MIR3128microRNA 3128 [Source:HGNC Symbol;Acc:HGNC:38188]210650.000-0.3652No
83MIR10BmicroRNA 10b [Source:HGNC Symbol;Acc:HGNC:31498]212330.000-0.3698No
84ERICH2glutamate rich 2 [Source:HGNC Symbol;Acc:HGNC:44395]212670.000-0.3707No
85ZNF385Bzinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]216610.000-0.3813No
86CYBRD1cytochrome b reductase 1 [Source:HGNC Symbol;Acc:HGNC:20797]218330.000-0.3859No
87MIR933microRNA 933 [Source:HGNC Symbol;Acc:HGNC:33676]229420.000-0.4159No
88KRT18P29keratin 18 pseudogene 29 [Source:HGNC Symbol;Acc:HGNC:33398]235940.000-0.4335No
89HAGLROSHAGLR opposite strand lncRNA [Source:HGNC Symbol;Acc:HGNC:50646]236900.000-0.4361No
90EVX2even-skipped homeobox 2 [Source:HGNC Symbol;Acc:HGNC:3507]237260.000-0.4370No
91CHRNA1cholinergic receptor nicotinic alpha 1 subunit [Source:HGNC Symbol;Acc:HGNC:1955]247830.000-0.4656No
92MIR4437microRNA 4437 [Source:HGNC Symbol;Acc:HGNC:41715]255700.000-0.4869No
93DNAJC19P5DnaJ heat shock protein family (Hsp40) member C19 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:45068]256540.000-0.4891No
94RNU6-1006PRNA, U6 small nuclear 1006, pseudogene [Source:HGNC Symbol;Acc:HGNC:47969]267050.000-0.5176No
95RNU6-1290PRNA, U6 small nuclear 1290, pseudogene [Source:HGNC Symbol;Acc:HGNC:48253]270830.000-0.5278No
96API5P2apoptosis inhibitor 5 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39070]28184-0.092-0.5561No
97GAD1glutamate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:4092]28217-0.097-0.5556No
98EXTL2P1exostosin like glycosyltransferase 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:3517]28423-0.121-0.5593No
99MYO3Bmyosin IIIB [Source:HGNC Symbol;Acc:HGNC:15576]28802-0.163-0.5671No
100SAP18P2SAP18 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:51568]28856-0.171-0.5659No
101CCDC173coiled-coil domain containing 173 [Source:HGNC Symbol;Acc:HGNC:25064]29747-0.282-0.5858No
102RPS6P2ribosomal protein S6 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:36446]30266-0.346-0.5946No
103RPSAP25ribosomal protein SA pseudogene 25 [Source:HGNC Symbol;Acc:HGNC:36405]30268-0.346-0.5894No
104UBR3ubiquitin protein ligase E3 component n-recognin 3 [Source:HGNC Symbol;Acc:HGNC:30467]30338-0.355-0.5859No
105LRP2LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]30394-0.364-0.5819No
106H3P6H3 histone pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:42980]30437-0.369-0.5775No
107RPL21P38ribosomal protein L21 pseudogene 38 [Source:HGNC Symbol;Acc:HGNC:36349]30581-0.390-0.5755No
108DAP3P2death associated protein 3 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:29762]30829-0.427-0.5758No
109WIPF1WAS/WASL interacting protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12736]31302-0.500-0.5811No
110FASTKD1FAST kinase domains 1 [Source:HGNC Symbol;Acc:HGNC:26150]32166-0.645-0.5947Yes
111TTN-AS1TTN antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44124]32247-0.664-0.5869Yes
112RPSAP24ribosomal protein SA pseudogene 24 [Source:HGNC Symbol;Acc:HGNC:36362]32572-0.737-0.5846Yes
113HNRNPA3heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]32664-0.760-0.5756Yes
114ITGA6integrin subunit alpha 6 [Source:HGNC Symbol;Acc:HGNC:6142]32986-0.838-0.5717Yes
115BBS5Bardet-Biedl syndrome 5 [Source:HGNC Symbol;Acc:HGNC:970]33225-0.900-0.5646Yes
116TLK1tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]33355-0.936-0.5540Yes
117RBM45RNA binding motif protein 45 [Source:HGNC Symbol;Acc:HGNC:24468]33473-0.966-0.5426Yes
118METAP1Dmethionyl aminopeptidase type 1D, mitochondrial [Source:HGNC Symbol;Acc:HGNC:32583]33567-0.992-0.5303Yes
119METTL8methyltransferase like 8 [Source:HGNC Symbol;Acc:HGNC:25856]33765-1.045-0.5199Yes
120SP9Sp9 transcription factor [Source:HGNC Symbol;Acc:HGNC:30690]33874-1.076-0.5066Yes
121SESTD1SEC14 and spectrin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18379]33940-1.093-0.4919Yes
122HAT1histone acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:4821]34075-1.137-0.4784Yes
123CERKLceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]34122-1.149-0.4624Yes
124DCAF17DDB1 and CUL4 associated factor 17 [Source:HGNC Symbol;Acc:HGNC:25784]34261-1.202-0.4481Yes
125DLX1distal-less homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2914]34338-1.228-0.4317Yes
126CIR1corepressor interacting with RBPJ, CIR1 [Source:HGNC Symbol;Acc:HGNC:24217]34664-1.355-0.4201Yes
127CDCA7cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]35016-1.527-0.4066Yes
128SP3Sp3 transcription factor [Source:HGNC Symbol;Acc:HGNC:11208]35046-1.541-0.3842Yes
129SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]35095-1.566-0.3620Yes
130KLHL23kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]35183-1.615-0.3400Yes
131OLA1Obg like ATPase 1 [Source:HGNC Symbol;Acc:HGNC:28833]35292-1.671-0.3178Yes
132UBE2E3ubiquitin conjugating enzyme E2 E3 [Source:HGNC Symbol;Acc:HGNC:12479]35334-1.692-0.2935Yes
133TTC30Btetratricopeptide repeat domain 30B [Source:HGNC Symbol;Acc:HGNC:26425]35562-1.824-0.2722Yes
134TTC30Atetratricopeptide repeat domain 30A [Source:HGNC Symbol;Acc:HGNC:25853]35690-1.920-0.2468Yes
135SCRN3secernin 3 [Source:HGNC Symbol;Acc:HGNC:30382]36073-2.210-0.2239Yes
136FKBP7FKBP prolyl isomerase 7 [Source:HGNC Symbol;Acc:HGNC:3723]36331-2.461-0.1938Yes
137GPR155G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]36541-2.739-0.1583Yes
138PRKRAprotein activator of interferon induced protein kinase EIF2AK2 [Source:HGNC Symbol;Acc:HGNC:9438]36973-3.743-0.1137Yes
139ITGA4integrin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6140]37002-3.881-0.0561Yes
140PDK1pyruvate dehydrogenase kinase 1 [Source:HGNC Symbol;Acc:HGNC:8809]37005-3.8870.0023Yes
Table: GSEA details [plain text format]



Fig 2: CHR2Q31   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR2Q31: Random ES distribution   
Gene set null distribution of ES for CHR2Q31