Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #WT_GAQ_versus_WT_NA.greenbergcls.cls #WT_GAQ_versus_WT_NA_repos |
| Phenotype | greenbergcls.cls#WT_GAQ_versus_WT_NA_repos |
| Upregulated in class | WT_NA |
| GeneSet | CHR3P12 |
| Enrichment Score (ES) | -0.6937054 |
| Normalized Enrichment Score (NES) | -1.404682 |
| Nominal p-value | 0.02284264 |
| FDR q-value | 0.3369555 |
| FWER p-Value | 0.901 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | SNRPCP10 | small nuclear ribonucleoprotein polypeptide C pseudogene 10 [Source:HGNC Symbol;Acc:HGNC:49825] | 3258 | 0.532 | -0.0495 | No |
| 2 | SETP6 | SET pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:42925] | 3765 | 0.431 | -0.0320 | No |
| 3 | THAP12P2 | THAP domain containing 12 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39566] | 3897 | 0.407 | -0.0061 | No |
| 4 | ZNF717 | zinc finger protein 717 [Source:HGNC Symbol;Acc:HGNC:29448] | 5557 | 0.146 | -0.0403 | No |
| 5 | NIPA2P2 | NIPA2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:42042] | 5598 | 0.141 | -0.0312 | No |
| 6 | CYP51A1P1 | cytochrome P450 family 51 subfamily A member 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:20245] | 6169 | 0.069 | -0.0416 | No |
| 7 | UNC93B3 | unc-93 homolog B3 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:13483] | 6190 | 0.065 | -0.0375 | No |
| 8 | CADM2 | cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:29849] | 6547 | 0.021 | -0.0455 | No |
| 9 | FRG2C | FSHD region gene 2 family member C [Source:HGNC Symbol;Acc:HGNC:33626] | 7024 | 0.000 | -0.0584 | No |
| 10 | RNU2-28P | RNA, U2 small nuclear 28, pseudogene [Source:HGNC Symbol;Acc:HGNC:48521] | 8388 | 0.000 | -0.0952 | No |
| 11 | RNU6-386P | RNA, U6 small nuclear 386, pseudogene [Source:HGNC Symbol;Acc:HGNC:47349] | 8439 | 0.000 | -0.0966 | No |
| 12 | RN7SL294P | RNA, 7SL, cytoplasmic 294, pseudogene [Source:HGNC Symbol;Acc:HGNC:46310] | 8446 | 0.000 | -0.0967 | No |
| 13 | CLUHP10 | clustered mitochondria homolog pseudogene 10 [Source:HGNC Symbol;Acc:HGNC:51574] | 8518 | 0.000 | -0.0986 | No |
| 14 | AGGF1P3 | angiogenic factor with G-patch and FHA domains 1 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:38053] | 8557 | 0.000 | -0.0997 | No |
| 15 | OR7E121P | olfactory receptor family 7 subfamily E member 121 pseudogene [Source:HGNC Symbol;Acc:HGNC:15049] | 8989 | 0.000 | -0.1113 | No |
| 16 | MYLKP1 | myosin light chain kinase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:7591] | 10772 | 0.000 | -0.1594 | No |
| 17 | LSP1P2 | LSP1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39717] | 10834 | 0.000 | -0.1611 | No |
| 18 | RN7SL647P | RNA, 7SL, cytoplasmic 647, pseudogene [Source:HGNC Symbol;Acc:HGNC:46663] | 11259 | 0.000 | -0.1725 | No |
| 19 | CADM2-AS1 | CADM2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41248] | 12301 | 0.000 | -0.2006 | No |
| 20 | CADM2-AS2 | CADM2 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:41247] | 12302 | 0.000 | -0.2006 | No |
| 21 | LINC00971 | long intergenic non-protein coding RNA 971 [Source:HGNC Symbol;Acc:HGNC:48737] | 12312 | 0.000 | -0.2009 | No |
| 22 | LINC00960 | long intergenic non-protein coding RNA 960 [Source:HGNC Symbol;Acc:HGNC:48710] | 12325 | 0.000 | -0.2012 | No |
| 23 | MIR1324 | microRNA 1324 [Source:HGNC Symbol;Acc:HGNC:35377] | 12624 | 0.000 | -0.2092 | No |
| 24 | ENPP7P2 | ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:48685] | 13449 | 0.000 | -0.2315 | No |
| 25 | MRPS17P3 | mitochondrial ribosomal protein S17 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:29736] | 14230 | 0.000 | -0.2526 | No |
| 26 | SRRM1P2 | serine/arginine repetitive matrix 1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:38163] | 14270 | 0.000 | -0.2536 | No |
| 27 | VGLL3 | vestigial like family member 3 [Source:HGNC Symbol;Acc:HGNC:24327] | 14444 | 0.000 | -0.2583 | No |
| 28 | MIR5688 | microRNA 5688 [Source:HGNC Symbol;Acc:HGNC:43463] | 15566 | 0.000 | -0.2886 | No |
| 29 | RN7SKP284 | RN7SK pseudogene 284 [Source:HGNC Symbol;Acc:HGNC:46008] | 18029 | 0.000 | -0.3551 | No |
| 30 | RNU6-217P | RNA, U6 small nuclear 217, pseudogene [Source:HGNC Symbol;Acc:HGNC:47180] | 18054 | 0.000 | -0.3557 | No |
| 31 | DUX4L26 | double homeobox 4 like 26 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:50807] | 18616 | 0.000 | -0.3709 | No |
| 32 | RN7SKP61 | RN7SK pseudogene 61 [Source:HGNC Symbol;Acc:HGNC:45785] | 18748 | 0.000 | -0.3744 | No |
| 33 | OR7E22P | olfactory receptor family 7 subfamily E member 22 pseudogene [Source:HGNC Symbol;Acc:HGNC:8394] | 20271 | 0.000 | -0.4155 | No |
| 34 | MIR3923 | microRNA 3923 [Source:HGNC Symbol;Acc:HGNC:38978] | 20800 | 0.000 | -0.4298 | No |
| 35 | LINC02027 | long intergenic non-protein coding RNA 2027 [Source:HGNC Symbol;Acc:HGNC:52862] | 21491 | 0.000 | -0.4484 | No |
| 36 | LINC02050 | long intergenic non-protein coding RNA 2050 [Source:HGNC Symbol;Acc:HGNC:52890] | 21526 | 0.000 | -0.4493 | No |
| 37 | LINC02025 | long intergenic non-protein coding RNA 2025 [Source:HGNC Symbol;Acc:HGNC:52860] | 21554 | 0.000 | -0.4500 | No |
| 38 | LINC02018 | long intergenic non-protein coding RNA 2018 [Source:HGNC Symbol;Acc:HGNC:52853] | 21570 | 0.000 | -0.4504 | No |
| 39 | LINC02008 | long intergenic non-protein coding RNA 2008 [Source:HGNC Symbol;Acc:HGNC:52844] | 21585 | 0.000 | -0.4508 | No |
| 40 | LINC02077 | long intergenic non-protein coding RNA 2077 [Source:HGNC Symbol;Acc:HGNC:52925] | 21668 | 0.000 | -0.4530 | No |
| 41 | LINC02070 | long intergenic non-protein coding RNA 2070 [Source:HGNC Symbol;Acc:HGNC:52916] | 21675 | 0.000 | -0.4532 | No |
| 42 | RNU6-1129P | RNA, U6 small nuclear 1129, pseudogene [Source:HGNC Symbol;Acc:HGNC:48092] | 22289 | 0.000 | -0.4697 | No |
| 43 | ROBO2 | roundabout guidance receptor 2 [Source:HGNC Symbol;Acc:HGNC:10250] | 22660 | 0.000 | -0.4797 | No |
| 44 | ROBO1 | roundabout guidance receptor 1 [Source:HGNC Symbol;Acc:HGNC:10249] | 22667 | 0.000 | -0.4799 | No |
| 45 | RARRES2P1 | retinoic acid receptor responder 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:48700] | 22869 | 0.000 | -0.4853 | No |
| 46 | RPL7AP23 | ribosomal protein L7a pseudogene 23 [Source:HGNC Symbol;Acc:HGNC:36884] | 23800 | 0.000 | -0.5104 | No |
| 47 | LINC00506 | long intergenic non-protein coding RNA 506 [Source:NCBI gene (formerly Entrezgene);Acc:100846978] | 24135 | 0.000 | -0.5195 | No |
| 48 | CNTN3 | contactin 3 [Source:HGNC Symbol;Acc:HGNC:2173] | 25290 | 0.000 | -0.5506 | No |
| 49 | RPL23AP49 | ribosomal protein L23a pseudogene 49 [Source:HGNC Symbol;Acc:HGNC:35689] | 25800 | 0.000 | -0.5644 | No |
| 50 | RN7SL751P | RNA, 7SL, cytoplasmic 751, pseudogene [Source:HGNC Symbol;Acc:HGNC:46767] | 25950 | 0.000 | -0.5684 | No |
| 51 | MIR4273 | microRNA 4273 [Source:HGNC Symbol;Acc:HGNC:38339] | 26316 | 0.000 | -0.5783 | No |
| 52 | FAM86DP | family with sequence similarity 86 member D, pseudogene [Source:HGNC Symbol;Acc:HGNC:32659] | 30592 | -0.392 | -0.6654 | Yes |
| 53 | HMGB1P38 | high mobility group box 1 pseudogene 38 [Source:HGNC Symbol;Acc:HGNC:39185] | 30730 | -0.412 | -0.6393 | Yes |
| 54 | OSBPL9P1 | oxysterol binding protein like 9 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:48731] | 32110 | -0.633 | -0.6307 | Yes |
| 55 | ALG1L6P | ALG1 like 6, pseudogene [Source:HGNC Symbol;Acc:HGNC:44375] | 32255 | -0.665 | -0.5865 | Yes |
| 56 | PPATP1 | phosphoribosyl pyrophosphate amidotransferase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:9239] | 32290 | -0.674 | -0.5386 | Yes |
| 57 | HNRNPA3P6 | heterogeneous nuclear ribonucleoprotein A3 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:48495] | 32432 | -0.707 | -0.4912 | Yes |
| 58 | HNRNPA3P8 | heterogeneous nuclear ribonucleoprotein A3 pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:48497] | 32514 | -0.725 | -0.4410 | Yes |
| 59 | RPS3AP15 | RPS3A pseudogene 15 [Source:HGNC Symbol;Acc:HGNC:35781] | 33750 | -1.043 | -0.3989 | Yes |
| 60 | AKR1B1P2 | aldo-keto reductase family 1 member B1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:425] | 34259 | -1.202 | -0.3257 | Yes |
| 61 | VDAC1P7 | voltage dependent anion channel 1 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:37482] | 36265 | -2.398 | -0.2064 | Yes |
| 62 | GBE1 | 1,4-alpha-glucan branching enzyme 1 [Source:HGNC Symbol;Acc:HGNC:4180] | 36789 | -3.160 | 0.0081 | Yes |
