Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #WT_GAQ_versus_WT_NA.greenbergcls.cls #WT_GAQ_versus_WT_NA_repos |
| Phenotype | greenbergcls.cls#WT_GAQ_versus_WT_NA_repos |
| Upregulated in class | WT_NA |
| GeneSet | CHR4Q35 |
| Enrichment Score (ES) | -0.61232877 |
| Normalized Enrichment Score (NES) | -1.318729 |
| Nominal p-value | 0.02913753 |
| FDR q-value | 0.4288865 |
| FWER p-Value | 1.0 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | RWDD4 | RWD domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23750] | 234 | 2.855 | 0.0720 | No |
| 2 | TLR3 | toll like receptor 3 [Source:HGNC Symbol;Acc:HGNC:11849] | 339 | 2.492 | 0.1375 | No |
| 3 | HSP90AA4P | heat shock protein 90 alpha family class A member 4, pseudogene [Source:HGNC Symbol;Acc:HGNC:5255] | 1751 | 1.004 | 0.1269 | No |
| 4 | SORBS2 | sorbin and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24098] | 4592 | 0.296 | 0.0583 | No |
| 5 | LRP2BP | LRP2 binding protein [Source:HGNC Symbol;Acc:HGNC:25434] | 4826 | 0.259 | 0.0591 | No |
| 6 | AGGF1P1 | angiogenic factor with G-patch and FHA domains 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:38051] | 5959 | 0.092 | 0.0310 | No |
| 7 | ZFP42 | ZFP42 zinc finger protein [Source:HGNC Symbol;Acc:HGNC:30949] | 6048 | 0.082 | 0.0309 | No |
| 8 | MYL12BP2 | myosin light chain 12B pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:51650] | 6461 | 0.032 | 0.0206 | No |
| 9 | DCTD | dCMP deaminase [Source:HGNC Symbol;Acc:HGNC:2710] | 6602 | 0.014 | 0.0172 | No |
| 10 | RPL23AP84 | ribosomal protein L23a pseudogene 84 [Source:HGNC Symbol;Acc:HGNC:51575] | 6656 | 0.006 | 0.0159 | No |
| 11 | RNU6-335P | RNA, U6 small nuclear 335, pseudogene [Source:HGNC Symbol;Acc:HGNC:47298] | 6722 | 0.000 | 0.0142 | No |
| 12 | RNU6-1053P | RNA, U6 small nuclear 1053, pseudogene [Source:HGNC Symbol;Acc:HGNC:48016] | 7324 | 0.000 | -0.0021 | No |
| 13 | RNU6-1055P | RNA, U6 small nuclear 1055, pseudogene [Source:HGNC Symbol;Acc:HGNC:48018] | 7383 | 0.000 | -0.0036 | No |
| 14 | RNU6-173P | RNA, U6 small nuclear 173, pseudogene [Source:HGNC Symbol;Acc:HGNC:47136] | 7458 | 0.000 | -0.0056 | No |
| 15 | LINC01262 | long intergenic non-protein coding RNA 1262 [Source:HGNC Symbol;Acc:HGNC:50275] | 7465 | 0.000 | -0.0058 | No |
| 16 | HELT | helt bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:33783] | 7518 | 0.000 | -0.0072 | No |
| 17 | LINC01596 | long intergenic non-protein coding RNA 1596 [Source:HGNC Symbol;Acc:HGNC:51591] | 8026 | 0.000 | -0.0209 | No |
| 18 | RNU2-34P | RNA, U2 small nuclear 34, pseudogene [Source:HGNC Symbol;Acc:HGNC:48527] | 8583 | 0.000 | -0.0359 | No |
| 19 | LINC01060 | long intergenic non-protein coding RNA 1060 [Source:HGNC Symbol;Acc:HGNC:49081] | 9299 | 0.000 | -0.0553 | No |
| 20 | LINC01093 | long intergenic non-protein coding RNA 1093 [Source:HGNC Symbol;Acc:HGNC:49218] | 9314 | 0.000 | -0.0557 | No |
| 21 | MIR3945HG | MIR3945 host gene [Source:HGNC Symbol;Acc:HGNC:52002] | 10267 | 0.000 | -0.0814 | No |
| 22 | KLKB1 | kallikrein B1 [Source:HGNC Symbol;Acc:HGNC:6371] | 11410 | 0.000 | -0.1123 | No |
| 23 | ORAOV1P1 | oral cancer overexpressed 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39203] | 12033 | 0.000 | -0.1291 | No |
| 24 | RNU4-64P | RNA, U4 small nuclear 64, pseudogene [Source:HGNC Symbol;Acc:HGNC:47000] | 12072 | 0.000 | -0.1301 | No |
| 25 | RNU7-192P | RNA, U7 small nuclear 192 pseudogene [Source:HGNC Symbol;Acc:HGNC:45726] | 12298 | 0.000 | -0.1362 | No |
| 26 | WWC2-AS2 | WWC2 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:26390] | 12429 | 0.000 | -0.1397 | No |
| 27 | WWC2-AS1 | WWC2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41041] | 12433 | 0.000 | -0.1398 | No |
| 28 | ADAM20P3 | ADAM metallopeptidase domain 20 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:43902] | 13392 | 0.000 | -0.1657 | No |
| 29 | F11-AS1 | F11 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27725] | 13866 | 0.000 | -0.1785 | No |
| 30 | MLLT10P2 | MLLT10 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39141] | 14657 | 0.000 | -0.1998 | No |
| 31 | LINC02515 | long intergenic non-protein coding RNA 2515 [Source:HGNC Symbol;Acc:HGNC:53504] | 14688 | 0.000 | -0.2006 | No |
| 32 | LINC02514 | long intergenic non-protein coding RNA 2514 [Source:HGNC Symbol;Acc:HGNC:53503] | 14689 | 0.000 | -0.2006 | No |
| 33 | LINC02508 | long intergenic non-protein coding RNA 2508 [Source:HGNC Symbol;Acc:HGNC:53497] | 14704 | 0.000 | -0.2010 | No |
| 34 | LINC02492 | long intergenic non-protein coding RNA 2492 [Source:HGNC Symbol;Acc:HGNC:53476] | 14881 | 0.000 | -0.2058 | No |
| 35 | LINC02437 | long intergenic non-protein coding RNA 2437 [Source:HGNC Symbol;Acc:HGNC:53369] | 15028 | 0.000 | -0.2097 | No |
| 36 | LINC02434 | long intergenic non-protein coding RNA 2434 [Source:HGNC Symbol;Acc:HGNC:53365] | 15032 | 0.000 | -0.2098 | No |
| 37 | LINC02436 | long intergenic non-protein coding RNA 2436 [Source:HGNC Symbol;Acc:HGNC:53368] | 15035 | 0.000 | -0.2099 | No |
| 38 | LINC02427 | long intergenic non-protein coding RNA 2427 [Source:HGNC Symbol;Acc:HGNC:53358] | 15040 | 0.000 | -0.2100 | No |
| 39 | DUX4L1 | double homeobox 4 like 1 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:3082] | 15094 | 0.000 | -0.2114 | No |
| 40 | DUX4L2 | double homeobox 4 like 2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:37267] | 15095 | 0.000 | -0.2114 | No |
| 41 | DUX4L3 | double homeobox 4 like 3 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:38688] | 15097 | 0.000 | -0.2114 | No |
| 42 | DUX4L4 | double homeobox 4 like 4 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:38686] | 15098 | 0.000 | -0.2114 | No |
| 43 | DUX4L5 | double homeobox 4 like 5 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:38689] | 15099 | 0.000 | -0.2114 | No |
| 44 | DUX4L6 | double homeobox 4 like 6 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:37265] | 15102 | 0.000 | -0.2115 | No |
| 45 | DUX4L7 | double homeobox 4 like 7 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:37266] | 15104 | 0.000 | -0.2115 | No |
| 46 | DUX4L8 | double homeobox 4 like 8 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:38670] | 15105 | 0.000 | -0.2115 | No |
| 47 | DUX4L9 | double homeobox 4 like 9 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:33855] | 15106 | 0.000 | -0.2115 | No |
| 48 | LINC02363 | long intergenic non-protein coding RNA 2363 [Source:HGNC Symbol;Acc:HGNC:53286] | 15204 | 0.000 | -0.2141 | No |
| 49 | LINC02365 | long intergenic non-protein coding RNA 2365 [Source:HGNC Symbol;Acc:HGNC:53285] | 15206 | 0.000 | -0.2142 | No |
| 50 | LINC02362 | long intergenic non-protein coding RNA 2362 [Source:HGNC Symbol;Acc:HGNC:53284] | 15209 | 0.000 | -0.2142 | No |
| 51 | LINC02374 | long intergenic non-protein coding RNA 2374 [Source:HGNC Symbol;Acc:HGNC:53296] | 15271 | 0.000 | -0.2159 | No |
| 52 | MTNR1A | melatonin receptor 1A [Source:HGNC Symbol;Acc:HGNC:7463] | 15945 | 0.000 | -0.2341 | No |
| 53 | STOX2 | storkhead box 2 [Source:HGNC Symbol;Acc:HGNC:25450] | 15985 | 0.000 | -0.2351 | No |
| 54 | F11 | coagulation factor XI [Source:HGNC Symbol;Acc:HGNC:3529] | 16538 | 0.000 | -0.2500 | No |
| 55 | FRG2 | FSHD region gene 2 [Source:HGNC Symbol;Acc:HGNC:19136] | 16711 | 0.000 | -0.2547 | No |
| 56 | CLUHP4 | clustered mitochondria homolog pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:38470] | 16832 | 0.000 | -0.2579 | No |
| 57 | PDLIM3 | PDZ and LIM domain 3 [Source:HGNC Symbol;Acc:HGNC:20767] | 17781 | 0.000 | -0.2836 | No |
| 58 | RNU6-479P | RNA, U6 small nuclear 479, pseudogene [Source:HGNC Symbol;Acc:HGNC:47442] | 18140 | 0.000 | -0.2932 | No |
| 59 | RN7SL28P | RNA, 7SL, cytoplasmic 28, pseudogene [Source:HGNC Symbol;Acc:HGNC:46044] | 18368 | 0.000 | -0.2994 | No |
| 60 | RN7SKP67 | RN7SK pseudogene 67 [Source:HGNC Symbol;Acc:HGNC:45791] | 18745 | 0.000 | -0.3095 | No |
| 61 | RNA5SP175 | RNA, 5S ribosomal pseudogene 175 [Source:HGNC Symbol;Acc:HGNC:43075] | 18807 | 0.000 | -0.3112 | No |
| 62 | RNA5SP174 | RNA, 5S ribosomal pseudogene 174 [Source:HGNC Symbol;Acc:HGNC:43074] | 18808 | 0.000 | -0.3112 | No |
| 63 | SLED1 | proteoglycan 3, pro eosinophil major basic protein 2 pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:643036] | 19743 | 0.000 | -0.3364 | No |
| 64 | DUX4 | double homeobox 4 [Source:HGNC Symbol;Acc:HGNC:50800] | 19767 | 0.000 | -0.3371 | No |
| 65 | MIR3945 | microRNA 3945 [Source:HGNC Symbol;Acc:HGNC:38954] | 20876 | 0.000 | -0.3670 | No |
| 66 | TRIML2 | tripartite motif family like 2 [Source:HGNC Symbol;Acc:HGNC:26378] | 21166 | 0.000 | -0.3748 | No |
| 67 | TRIML1 | tripartite motif family like 1 [Source:HGNC Symbol;Acc:HGNC:26698] | 21175 | 0.000 | -0.3750 | No |
| 68 | MRPS36P2 | mitochondrial ribosomal protein S36 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:29772] | 22113 | 0.000 | -0.4004 | No |
| 69 | RPSAP70 | ribosomal protein SA pseudogene 70 [Source:HGNC Symbol;Acc:HGNC:51923] | 22412 | 0.000 | -0.4084 | No |
| 70 | RARRES2P4 | retinoic acid receptor responder 2 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:48703] | 22879 | 0.000 | -0.4210 | No |
| 71 | CLDN22 | claudin 22 [Source:HGNC Symbol;Acc:HGNC:2044] | 24710 | 0.000 | -0.4705 | No |
| 72 | CLDN24 | claudin 24 [Source:HGNC Symbol;Acc:HGNC:37200] | 24714 | 0.000 | -0.4706 | No |
| 73 | RNU1-51P | RNA, U1 small nuclear 51, pseudogene [Source:HGNC Symbol;Acc:HGNC:48393] | 25294 | 0.000 | -0.4862 | No |
| 74 | MIR4455 | microRNA 4455 [Source:HGNC Symbol;Acc:HGNC:41536] | 25549 | 0.000 | -0.4931 | No |
| 75 | DBET | D4Z4 binding element transcript [Source:HGNC Symbol;Acc:HGNC:43904] | 25846 | 0.000 | -0.5011 | No |
| 76 | CCDC110 | coiled-coil domain containing 110 [Source:HGNC Symbol;Acc:HGNC:28504] | 25894 | 0.000 | -0.5024 | No |
| 77 | FLJ38576 | uncharacterized LOC651430 [Source:NCBI gene (formerly Entrezgene);Acc:651430] | 26731 | 0.000 | -0.5250 | No |
| 78 | TUBB7P | tubulin beta 7 pseudogene [Source:HGNC Symbol;Acc:HGNC:12413] | 27519 | -0.008 | -0.5460 | No |
| 79 | VTI1BP2 | vesicle transport through interaction with t-SNAREs 1B pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:43728] | 27600 | -0.020 | -0.5477 | No |
| 80 | SLC25A5P6 | solute carrier family 25 member 5 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:512] | 28059 | -0.074 | -0.5580 | No |
| 81 | C4orf47 | chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346] | 28395 | -0.119 | -0.5638 | No |
| 82 | FAT1 | FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595] | 28405 | -0.120 | -0.5607 | No |
| 83 | FAM149A | family with sequence similarity 149 member A [Source:HGNC Symbol;Acc:HGNC:24527] | 29555 | -0.260 | -0.5847 | No |
| 84 | ACSL1 | acyl-CoA synthetase long chain family member 1 [Source:HGNC Symbol;Acc:HGNC:3569] | 29772 | -0.285 | -0.5827 | No |
| 85 | TRAPPC11 | trafficking protein particle complex 11 [Source:HGNC Symbol;Acc:HGNC:25751] | 30493 | -0.377 | -0.5918 | No |
| 86 | ICE2P1 | interactor of little elongation complex ELL subunit 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:48856] | 30970 | -0.449 | -0.5924 | Yes |
| 87 | ENPP6 | ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:HGNC Symbol;Acc:HGNC:23409] | 31429 | -0.518 | -0.5905 | Yes |
| 88 | FRG1 | FSHD region gene 1 [Source:HGNC Symbol;Acc:HGNC:3954] | 32136 | -0.639 | -0.5921 | Yes |
| 89 | WWC2 | WW and C2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24148] | 32200 | -0.653 | -0.5759 | Yes |
| 90 | CDKN2AIP | CDKN2A interacting protein [Source:HGNC Symbol;Acc:HGNC:24325] | 32276 | -0.670 | -0.5596 | Yes |
| 91 | IRF2 | interferon regulatory factor 2 [Source:HGNC Symbol;Acc:HGNC:6117] | 34229 | -1.191 | -0.5797 | Yes |
| 92 | SLC25A4 | solute carrier family 25 member 4 [Source:HGNC Symbol;Acc:HGNC:10990] | 34421 | -1.257 | -0.5503 | Yes |
| 93 | CFAP97 | cilia and flagella associated protein 97 [Source:HGNC Symbol;Acc:HGNC:29276] | 34624 | -1.340 | -0.5191 | Yes |
| 94 | UFSP2 | UFM1 specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:25640] | 35141 | -1.590 | -0.4894 | Yes |
| 95 | CYP4V2 | cytochrome P450 family 4 subfamily V member 2 [Source:HGNC Symbol;Acc:HGNC:23198] | 35354 | -1.703 | -0.4484 | Yes |
| 96 | CASP3 | caspase 3 [Source:HGNC Symbol;Acc:HGNC:1504] | 35885 | -2.065 | -0.4061 | Yes |
| 97 | CENPU | centromere protein U [Source:HGNC Symbol;Acc:HGNC:21348] | 36076 | -2.214 | -0.3505 | Yes |
| 98 | ING2 | inhibitor of growth family member 2 [Source:HGNC Symbol;Acc:HGNC:6063] | 36116 | -2.257 | -0.2897 | Yes |
| 99 | SNX25 | sorting nexin 25 [Source:HGNC Symbol;Acc:HGNC:21883] | 36149 | -2.279 | -0.2281 | Yes |
| 100 | CIBAR1P2 | CIBAR1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:32287] | 36432 | -2.593 | -0.1646 | Yes |
| 101 | PRIMPOL | primase and DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:26575] | 36569 | -2.783 | -0.0919 | Yes |
| 102 | ANKRD37 | ankyrin repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:29593] | 36998 | -3.864 | 0.0025 | Yes |
