Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #WT_GAQ_versus_WT_NA.greenbergcls.cls #WT_GAQ_versus_WT_NA_repos |
| Phenotype | greenbergcls.cls#WT_GAQ_versus_WT_NA_repos |
| Upregulated in class | WT_NA |
| GeneSet | CHR5Q21 |
| Enrichment Score (ES) | -0.6781624 |
| Normalized Enrichment Score (NES) | -1.3693397 |
| Nominal p-value | 0.025575448 |
| FDR q-value | 0.3477674 |
| FWER p-Value | 0.985 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | CHD1 | chromodomain helicase DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1915] | 2281 | 0.792 | -0.0296 | No |
| 2 | GJA1P1 | gap junction protein alpha 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:4275] | 2505 | 0.722 | -0.0064 | No |
| 3 | MTCO3P22 | MT-CO3 pseudogene 22 [Source:HGNC Symbol;Acc:HGNC:52125] | 3164 | 0.552 | -0.0019 | No |
| 4 | MACIR | macrophage immunometabolism regulator [Source:HGNC Symbol;Acc:HGNC:25052] | 3645 | 0.451 | 0.0034 | No |
| 5 | EFNA5 | ephrin A5 [Source:HGNC Symbol;Acc:HGNC:3225] | 3868 | 0.412 | 0.0141 | No |
| 6 | GUSBP8 | GUSB pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:42322] | 4253 | 0.347 | 0.0177 | No |
| 7 | GIN1 | gypsy retrotransposon integrase 1 [Source:HGNC Symbol;Acc:HGNC:25959] | 4743 | 0.274 | 0.0156 | No |
| 8 | EIF3KP1 | eukaryotic translation initiation factor 3 subunit K pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:44016] | 6041 | 0.084 | -0.0160 | No |
| 9 | RNU6-334P | RNA, U6 small nuclear 334, pseudogene [Source:HGNC Symbol;Acc:HGNC:47297] | 6743 | 0.000 | -0.0350 | No |
| 10 | SLCO6A1 | solute carrier organic anion transporter family member 6A1 [Source:HGNC Symbol;Acc:HGNC:23613] | 7298 | 0.000 | -0.0499 | No |
| 11 | PDZPH1P | PDZ and pleckstrin homology domains 1, pseudogene [Source:HGNC Symbol;Acc:HGNC:51488] | 7354 | 0.000 | -0.0514 | No |
| 12 | SLCO4C1 | solute carrier organic anion transporter family member 4C1 [Source:HGNC Symbol;Acc:HGNC:23612] | 8015 | 0.000 | -0.0692 | No |
| 13 | MTND6P22 | MT-ND6 pseudogene 22 [Source:HGNC Symbol;Acc:HGNC:51978] | 8191 | 0.000 | -0.0740 | No |
| 14 | MTATP6P2 | MT-ATP6 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:44576] | 8615 | 0.000 | -0.0854 | No |
| 15 | AC114324.1 | putative POM121-like protein 1-like [Source:NCBI gene (formerly Entrezgene);Acc:100652833] | 8617 | 0.000 | -0.0854 | No |
| 16 | EEF1A1P20 | eukaryotic translation elongation factor 1 alpha 1 pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:37893] | 9001 | 0.000 | -0.0957 | No |
| 17 | MTND4LP5 | MT-ND4L pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:42239] | 9027 | 0.000 | -0.0964 | No |
| 18 | LINC01023 | long intergenic non-protein coding RNA 1023 [Source:HGNC Symbol;Acc:HGNC:49004] | 9341 | 0.000 | -0.1049 | No |
| 19 | RNU1-140P | RNA, U1 small nuclear 140, pseudogene [Source:HGNC Symbol;Acc:HGNC:48482] | 10418 | 0.000 | -0.1339 | No |
| 20 | AC099520.1 | novel transcript | 11432 | 0.000 | -0.1613 | No |
| 21 | RN7SL255P | RNA, 7SL, cytoplasmic 255, pseudogene [Source:HGNC Symbol;Acc:HGNC:46271] | 12319 | 0.000 | -0.1852 | No |
| 22 | AC008467.1 | novel transcript | 13187 | 0.000 | -0.2086 | No |
| 23 | RN7SL802P | RNA, 7SL, cytoplasmic 802, pseudogene [Source:HGNC Symbol;Acc:HGNC:46818] | 13239 | 0.000 | -0.2100 | No |
| 24 | LINC02163 | long intergenic non-protein coding RNA 2163 [Source:HGNC Symbol;Acc:HGNC:53024] | 14334 | 0.000 | -0.2395 | No |
| 25 | LINC02115 | long intergenic non-protein coding RNA 2115 [Source:HGNC Symbol;Acc:HGNC:52970] | 14412 | 0.000 | -0.2416 | No |
| 26 | LINC02113 | long intergenic non-protein coding RNA 2113 [Source:HGNC Symbol;Acc:HGNC:52967] | 14425 | 0.000 | -0.2420 | No |
| 27 | MTCYBP22 | MT-CYB pseudogene 22 [Source:HGNC Symbol;Acc:HGNC:51979] | 16854 | 0.000 | -0.3075 | No |
| 28 | PSMC1P5 | proteasome 26S subunit, ATPase 1 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:39780] | 16874 | 0.000 | -0.3080 | No |
| 29 | RN7SL782P | RNA, 7SL, cytoplasmic 782, pseudogene [Source:HGNC Symbol;Acc:HGNC:46798] | 17486 | 0.000 | -0.3245 | No |
| 30 | RN7SKP230 | RN7SK pseudogene 230 [Source:HGNC Symbol;Acc:HGNC:45954] | 18134 | 0.000 | -0.3420 | No |
| 31 | RN7SKP68 | RN7SK pseudogene 68 [Source:HGNC Symbol;Acc:HGNC:45792] | 18742 | 0.000 | -0.3584 | No |
| 32 | RN7SKP62 | RN7SK pseudogene 62 [Source:HGNC Symbol;Acc:HGNC:45786] | 18746 | 0.000 | -0.3585 | No |
| 33 | RNA5SP189 | RNA, 5S ribosomal pseudogene 189 [Source:HGNC Symbol;Acc:HGNC:43089] | 18794 | 0.000 | -0.3597 | No |
| 34 | RNA5SP188 | RNA, 5S ribosomal pseudogene 188 [Source:HGNC Symbol;Acc:HGNC:43088] | 18795 | 0.000 | -0.3597 | No |
| 35 | LINC01848 | long intergenic non-protein coding RNA 1848 [Source:HGNC Symbol;Acc:HGNC:52663] | 19591 | 0.000 | -0.3812 | No |
| 36 | RN7SKP122 | RN7SK pseudogene 122 [Source:HGNC Symbol;Acc:HGNC:45846] | 20441 | 0.000 | -0.4041 | No |
| 37 | LINC01950 | long intergenic non-protein coding RNA 1950 [Source:HGNC Symbol;Acc:HGNC:52773] | 20536 | 0.000 | -0.4067 | No |
| 38 | LINC02062 | long intergenic non-protein coding RNA 2062 [Source:HGNC Symbol;Acc:HGNC:52907] | 21502 | 0.000 | -0.4327 | No |
| 39 | MIR548P | microRNA 548p [Source:HGNC Symbol;Acc:HGNC:35351] | 21604 | 0.000 | -0.4355 | No |
| 40 | RNU6-1119P | RNA, U6 small nuclear 1119, pseudogene [Source:HGNC Symbol;Acc:HGNC:48082] | 21953 | 0.000 | -0.4449 | No |
| 41 | RNU6-47P | RNA, U6 small nuclear 47, pseudogene [Source:HGNC Symbol;Acc:HGNC:34291] | 22659 | 0.000 | -0.4639 | No |
| 42 | KRT18P42 | keratin 18 pseudogene 42 [Source:HGNC Symbol;Acc:HGNC:33412] | 23511 | 0.000 | -0.4869 | No |
| 43 | LINC00491 | long intergenic non-protein coding RNA 491 [Source:HGNC Symbol;Acc:HGNC:43428] | 24550 | 0.000 | -0.5149 | No |
| 44 | LINC00492 | long intergenic non-protein coding RNA 492 [Source:HGNC Symbol;Acc:HGNC:43429] | 24551 | 0.000 | -0.5149 | No |
| 45 | OR7H2P | olfactory receptor family 7 subfamily H member 2 pseudogene [Source:HGNC Symbol;Acc:HGNC:31314] | 27342 | 0.000 | -0.5903 | No |
| 46 | PGAM5P1 | PGAM family member 5, mitochondrial serine/threonine protein phosphatase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42467] | 28994 | -0.189 | -0.6272 | No |
| 47 | MTCO2P22 | MT-CO2 pseudogene 22 [Source:HGNC Symbol;Acc:HGNC:52151] | 30882 | -0.434 | -0.6606 | Yes |
| 48 | MTND5P10 | MT-ND5 pseudogene 10 [Source:HGNC Symbol;Acc:HGNC:42272] | 31231 | -0.489 | -0.6503 | Yes |
| 49 | RAB9BP1 | RAB9B, member RAS oncogene family pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:9793] | 32071 | -0.628 | -0.6475 | Yes |
| 50 | PJA2 | praja ring finger ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:17481] | 32207 | -0.654 | -0.6247 | Yes |
| 51 | PPIP5K2 | diphosphoinositol pentakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:29035] | 32271 | -0.669 | -0.5994 | Yes |
| 52 | MTCO1P22 | MT-CO1 pseudogene 22 [Source:HGNC Symbol;Acc:HGNC:52087] | 32912 | -0.820 | -0.5835 | Yes |
| 53 | PAM | peptidylglycine alpha-amidating monooxygenase [Source:HGNC Symbol;Acc:HGNC:8596] | 33184 | -0.889 | -0.5549 | Yes |
| 54 | NUDT12 | nudix hydrolase 12 [Source:HGNC Symbol;Acc:HGNC:18826] | 34453 | -1.273 | -0.5377 | Yes |
| 55 | FER | FER tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3655] | 34562 | -1.317 | -0.4873 | Yes |
| 56 | FBXL17 | F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615] | 34564 | -1.318 | -0.4341 | Yes |
| 57 | MTND4P35 | MT-ND4 pseudogene 35 [Source:HGNC Symbol;Acc:HGNC:51949] | 34568 | -1.319 | -0.3809 | Yes |
| 58 | MTND3P19 | MT-ND3 pseudogene 19 [Source:HGNC Symbol;Acc:HGNC:52081] | 34673 | -1.360 | -0.3287 | Yes |
| 59 | MAN2A1 | mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824] | 35635 | -1.872 | -0.2790 | Yes |
| 60 | FAM174A | family with sequence similarity 174 member A [Source:HGNC Symbol;Acc:HGNC:24943] | 36876 | -3.371 | -0.1762 | Yes |
| 61 | ST8SIA4 | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:10871] | 37078 | -4.501 | 0.0003 | Yes |
