Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #WT_GAQ_versus_WT_NA.greenbergcls.cls #WT_GAQ_versus_WT_NA_repos |
| Phenotype | greenbergcls.cls#WT_GAQ_versus_WT_NA_repos |
| Upregulated in class | WT_GAQ |
| GeneSet | CHR6P24 |
| Enrichment Score (ES) | 0.50144845 |
| Normalized Enrichment Score (NES) | 1.1508223 |
| Nominal p-value | 0.16521738 |
| FDR q-value | 0.7704934 |
| FWER p-Value | 0.998 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | EDN1 | endothelin 1 [Source:HGNC Symbol;Acc:HGNC:3176] | 51 | 4.081 | 0.1805 | Yes |
| 2 | GCNT2 | glucosaminyl (N-acetyl) transferase 2 (I blood group) [Source:HGNC Symbol;Acc:HGNC:4204] | 517 | 2.049 | 0.2593 | Yes |
| 3 | EEF1E1 | eukaryotic translation elongation factor 1 epsilon 1 [Source:HGNC Symbol;Acc:HGNC:3212] | 687 | 1.778 | 0.3339 | Yes |
| 4 | PIP5K1P1 | phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:28372] | 1824 | 0.977 | 0.3468 | Yes |
| 5 | PAK1IP1 | PAK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20882] | 2041 | 0.883 | 0.3803 | Yes |
| 6 | NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 [Source:HGNC Symbol;Acc:HGNC:7733] | 2084 | 0.864 | 0.4177 | Yes |
| 7 | SLC35B3 | solute carrier family 35 member B3 [Source:HGNC Symbol;Acc:HGNC:21601] | 2187 | 0.822 | 0.4516 | Yes |
| 8 | DSP | desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052] | 3200 | 0.545 | 0.4485 | Yes |
| 9 | RIOK1 | RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656] | 3285 | 0.526 | 0.4697 | Yes |
| 10 | RREB1 | ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449] | 3459 | 0.487 | 0.4868 | Yes |
| 11 | CAGE1 | cancer antigen 1 [Source:HGNC Symbol;Acc:HGNC:21622] | 3658 | 0.449 | 0.5014 | Yes |
| 12 | SSR1 | signal sequence receptor subunit 1 [Source:HGNC Symbol;Acc:HGNC:11323] | 4478 | 0.312 | 0.4933 | No |
| 13 | AMD1P4 | adenosylmethionine decarboxylase 1 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:51609] | 4876 | 0.251 | 0.4937 | No |
| 14 | BLOC1S5 | biogenesis of lysosomal organelles complex 1 subunit 5 [Source:HGNC Symbol;Acc:HGNC:18561] | 5851 | 0.106 | 0.4721 | No |
| 15 | RPL15P3 | ribosomal protein L15 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:21538] | 6702 | 0.001 | 0.4493 | No |
| 16 | ELOVL2-AS1 | ELOVL2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44156] | 6977 | 0.000 | 0.4419 | No |
| 17 | MIR5689HG | MIR5689 host gene [Source:HGNC Symbol;Acc:HGNC:52007] | 7995 | 0.000 | 0.4144 | No |
| 18 | C6orf52 | chromosome 6 open reading frame 52 [Source:HGNC Symbol;Acc:HGNC:20881] | 10531 | 0.000 | 0.3460 | No |
| 19 | SYCP2L | synaptonemal complex protein 2 like [Source:HGNC Symbol;Acc:HGNC:21537] | 11950 | 0.000 | 0.3077 | No |
| 20 | GCM2 | glial cells missing transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:4198] | 13353 | 0.000 | 0.2698 | No |
| 21 | TMEM14B | transmembrane protein 14B [Source:HGNC Symbol;Acc:HGNC:21384] | 13659 | 0.000 | 0.2616 | No |
| 22 | LINC02530 | long intergenic non-protein coding RNA 2530 [Source:HGNC Symbol;Acc:HGNC:53556] | 14733 | 0.000 | 0.2326 | No |
| 23 | LINC02522 | long intergenic non-protein coding RNA 2522 [Source:HGNC Symbol;Acc:HGNC:53541] | 14747 | 0.000 | 0.2323 | No |
| 24 | MIR5689 | microRNA 5689 [Source:HGNC Symbol;Acc:HGNC:43479] | 15562 | 0.000 | 0.2103 | No |
| 25 | HULC | hepatocellular carcinoma up-regulated long non-coding RNA [Source:HGNC Symbol;Acc:HGNC:34232] | 15824 | 0.000 | 0.2032 | No |
| 26 | OFCC1 | orofacial cleft 1 candidate 1 [Source:HGNC Symbol;Acc:HGNC:21017] | 16981 | 0.000 | 0.1720 | No |
| 27 | ERVFRD-1 | endogenous retrovirus group FRD member 1, envelope [Source:HGNC Symbol;Acc:HGNC:33823] | 17546 | 0.000 | 0.1568 | No |
| 28 | GCNT2P1 | GCNT2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:21623] | 17798 | 0.000 | 0.1500 | No |
| 29 | RNU6ATAC21P | RNA, U6atac small nuclear 21, pseudogene [Source:HGNC Symbol;Acc:HGNC:46920] | 17814 | 0.000 | 0.1496 | No |
| 30 | BLOC1S5-TXNDC5 | BLOC1S5-TXNDC5 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:42001] | 18081 | 0.000 | 0.1424 | No |
| 31 | ADTRP | androgen dependent TFPI regulating protein [Source:HGNC Symbol;Acc:HGNC:21214] | 18470 | 0.000 | 0.1319 | No |
| 32 | RN7SKP293 | RN7SK pseudogene 293 [Source:HGNC Symbol;Acc:HGNC:46017] | 18766 | 0.000 | 0.1240 | No |
| 33 | MAK | male germ cell associated kinase [Source:HGNC Symbol;Acc:HGNC:6816] | 18887 | 0.000 | 0.1207 | No |
| 34 | BMP6 | bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073] | 19058 | 0.000 | 0.1161 | No |
| 35 | RNA5SP203 | RNA, 5S ribosomal pseudogene 203 [Source:HGNC Symbol;Acc:HGNC:43103] | 19339 | 0.000 | 0.1086 | No |
| 36 | LINC00518 | long intergenic non-protein coding RNA 518 [Source:HGNC Symbol;Acc:HGNC:28626] | 24114 | 0.000 | -0.0203 | No |
| 37 | RNU1-64P | RNA, U1 small nuclear 64, pseudogene [Source:HGNC Symbol;Acc:HGNC:48406] | 25685 | 0.000 | -0.0627 | No |
| 38 | ELOVL2 | ELOVL fatty acid elongase 2 [Source:HGNC Symbol;Acc:HGNC:14416] | 25781 | 0.000 | -0.0653 | No |
| 39 | TFAP2A-AS1 | TFAP2A antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40579] | 25795 | 0.000 | -0.0656 | No |
| 40 | AL008729.1 | novel transcript, antisense to PHACTR1 | 26009 | 0.000 | -0.0714 | No |
| 41 | RNU1-11P | RNA, U1 small nuclear 11, pseudogene [Source:HGNC Symbol;Acc:HGNC:10137] | 26559 | 0.000 | -0.0862 | No |
| 42 | MRPL48P1 | mitochondrial ribosomal protein L48 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:21379] | 27537 | -0.011 | -0.1121 | No |
| 43 | EEF1E1-BLOC1S5 | EEF1E1-BLOC1S5 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:49187] | 27740 | -0.038 | -0.1159 | No |
| 44 | THAP12P5 | THAP domain containing 12 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:39569] | 28119 | -0.083 | -0.1224 | No |
| 45 | SMIM13 | small integral membrane protein 13 [Source:HGNC Symbol;Acc:HGNC:27356] | 28299 | -0.107 | -0.1224 | No |
| 46 | TMEM14C | transmembrane protein 14C [Source:HGNC Symbol;Acc:HGNC:20952] | 30142 | -0.329 | -0.1575 | No |
| 47 | PHACTR1 | phosphatase and actin regulator 1 [Source:HGNC Symbol;Acc:HGNC:20990] | 30448 | -0.371 | -0.1492 | No |
| 48 | HNRNPLP1 | heterogeneous nuclear ribonucleoprotein L pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:48748] | 30591 | -0.392 | -0.1356 | No |
| 49 | TXNDC5 | thioredoxin domain containing 5 [Source:HGNC Symbol;Acc:HGNC:21073] | 30944 | -0.444 | -0.1253 | No |
| 50 | SUMO2P12 | SUMO2 pseudogene 12 [Source:HGNC Symbol;Acc:HGNC:49350] | 31124 | -0.470 | -0.1092 | No |
| 51 | TFAP2A | transcription factor AP-2 alpha [Source:HGNC Symbol;Acc:HGNC:11742] | 31935 | -0.599 | -0.1044 | No |
| 52 | SNRNP48 | small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368] | 33198 | -0.893 | -0.0987 | No |
| 53 | TBC1D7 | TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066] | 34290 | -1.211 | -0.0741 | No |
| 54 | TMEM170B | transmembrane protein 170B [Source:HGNC Symbol;Acc:HGNC:34244] | 34786 | -1.411 | -0.0246 | No |
| 55 | HIVEP1 | HIVEP zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:4920] | 35734 | -1.948 | 0.0366 | No |
