Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #WT_GAQ_versus_WT_NA.greenbergcls.cls #WT_GAQ_versus_WT_NA_repos |
| Phenotype | greenbergcls.cls#WT_GAQ_versus_WT_NA_repos |
| Upregulated in class | WT_NA |
| GeneSet | CHR6P25 |
| Enrichment Score (ES) | -0.63370436 |
| Normalized Enrichment Score (NES) | -1.2983427 |
| Nominal p-value | 0.04761905 |
| FDR q-value | 0.4650153 |
| FWER p-Value | 1.0 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | PSMC1P11 | proteasome 26S subunit, ATPase 1 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:39786] | 1457 | 1.122 | 0.0005 | No |
| 2 | AL033523.1 | novel transcript | 1601 | 1.068 | 0.0345 | No |
| 3 | LYRM4 | LYR motif containing 4 [Source:HGNC Symbol;Acc:HGNC:21365] | 1866 | 0.960 | 0.0615 | No |
| 4 | IRF4 | interferon regulatory factor 4 [Source:HGNC Symbol;Acc:HGNC:6119] | 2133 | 0.841 | 0.0842 | No |
| 5 | FAM136BP | family with sequence similarity 136 member B, pseudogene [Source:HGNC Symbol;Acc:HGNC:21110] | 2970 | 0.596 | 0.0828 | No |
| 6 | RIPK1 | receptor interacting serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:10019] | 3722 | 0.436 | 0.0780 | No |
| 7 | RPP40 | ribonuclease P/MRP subunit p40 [Source:HGNC Symbol;Acc:HGNC:20992] | 6225 | 0.061 | 0.0126 | No |
| 8 | TDGF1P4 | teratocarcinoma-derived growth factor 1 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:11704] | 7542 | 0.000 | -0.0230 | No |
| 9 | LINC01600 | long intergenic non-protein coding RNA 1600 [Source:HGNC Symbol;Acc:HGNC:21600] | 7690 | 0.000 | -0.0269 | No |
| 10 | LINC01011 | long intergenic non-protein coding RNA 1011 [Source:HGNC Symbol;Acc:HGNC:33812] | 8414 | 0.000 | -0.0465 | No |
| 11 | AL159166.1 | novel transcript | 9074 | 0.000 | -0.0643 | No |
| 12 | C6orf201 | chromosome 6 open reading frame 201 [Source:HGNC Symbol;Acc:HGNC:21620] | 9317 | 0.000 | -0.0708 | No |
| 13 | OR4F1P | olfactory receptor family 4 subfamily F member 1 pseudogene [Source:HGNC Symbol;Acc:HGNC:8298] | 11902 | 0.000 | -0.1406 | No |
| 14 | AL021328.1 | novel transcript, antisense to FARS2 | 13900 | 0.000 | -0.1945 | No |
| 15 | FAM217A | family with sequence similarity 217 member A [Source:HGNC Symbol;Acc:HGNC:21362] | 14251 | 0.000 | -0.2040 | No |
| 16 | LINC02533 | long intergenic non-protein coding RNA 2533 [Source:HGNC Symbol;Acc:HGNC:53566] | 14728 | 0.000 | -0.2169 | No |
| 17 | LINC02525 | long intergenic non-protein coding RNA 2525 [Source:HGNC Symbol;Acc:HGNC:53545] | 14743 | 0.000 | -0.2172 | No |
| 18 | LINC02521 | long intergenic non-protein coding RNA 2521 [Source:HGNC Symbol;Acc:HGNC:53560] | 14748 | 0.000 | -0.2173 | No |
| 19 | MIR5683 | microRNA 5683 [Source:HGNC Symbol;Acc:HGNC:43453] | 15569 | 0.000 | -0.2395 | No |
| 20 | PXDC1 | PX domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21361] | 15643 | 0.000 | -0.2415 | No |
| 21 | AL035696.3 | novel transcript | 15659 | 0.000 | -0.2419 | No |
| 22 | RN7SL554P | RNA, 7SL, cytoplasmic 554, pseudogene [Source:HGNC Symbol;Acc:HGNC:46570] | 15850 | 0.000 | -0.2470 | No |
| 23 | HMGN2P28 | high mobility group nucleosomal binding domain 2 pseudogene 28 [Source:HGNC Symbol;Acc:HGNC:39395] | 15984 | 0.000 | -0.2506 | No |
| 24 | SNAPC5P1 | small nuclear RNA activating complex polypeptide 5 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:38667] | 16155 | 0.000 | -0.2552 | No |
| 25 | WBP1LP12 | WBP1L pseudogene 12 [Source:HGNC Symbol;Acc:HGNC:51472] | 16368 | 0.000 | -0.2609 | No |
| 26 | PPP1R3G | protein phosphatase 1 regulatory subunit 3G [Source:HGNC Symbol;Acc:HGNC:14945] | 17637 | 0.000 | -0.2952 | No |
| 27 | LY86-AS1 | LY86 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:26593] | 19024 | 0.000 | -0.3326 | No |
| 28 | AL022097.1 | novel transcript, antisense to FARS2 | 19194 | 0.000 | -0.3372 | No |
| 29 | RNA5SP202 | RNA, 5S ribosomal pseudogene 202 [Source:HGNC Symbol;Acc:HGNC:43102] | 19331 | 0.000 | -0.3408 | No |
| 30 | RNA5SP201 | RNA, 5S ribosomal pseudogene 201 [Source:HGNC Symbol;Acc:HGNC:43101] | 19332 | 0.000 | -0.3408 | No |
| 31 | SERPINB9P1 | serpin family B member 9 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:28590] | 19720 | 0.000 | -0.3513 | No |
| 32 | RN7SL352P | RNA, 7SL, cytoplasmic 352, pseudogene [Source:HGNC Symbol;Acc:HGNC:46368] | 19914 | 0.000 | -0.3565 | No |
| 33 | SERPINB8P1 | serpin family B member 8 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:8953] | 20612 | 0.000 | -0.3753 | No |
| 34 | CNN3P1 | calponin 3 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:38666] | 22085 | 0.000 | -0.4151 | No |
| 35 | GMDS-DT | GMDS divergent transcript [Source:HGNC Symbol;Acc:HGNC:48993] | 22256 | 0.000 | -0.4197 | No |
| 36 | MIR3691 | microRNA 3691 [Source:HGNC Symbol;Acc:HGNC:38909] | 22567 | 0.000 | -0.4281 | No |
| 37 | F13A1 | coagulation factor XIII A chain [Source:HGNC Symbol;Acc:HGNC:3531] | 22818 | 0.000 | -0.4348 | No |
| 38 | HUS1B | HUS1 checkpoint clamp component B [Source:HGNC Symbol;Acc:HGNC:16485] | 22889 | 0.000 | -0.4367 | No |
| 39 | CICP18 | capicua transcriptional repressor pseudogene 18 [Source:HGNC Symbol;Acc:HGNC:48828] | 23042 | 0.000 | -0.4408 | No |
| 40 | FAM50B | family with sequence similarity 50 member B [Source:HGNC Symbol;Acc:HGNC:18789] | 23131 | 0.000 | -0.4432 | No |
| 41 | MYLK4 | myosin light chain kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:27972] | 23493 | 0.000 | -0.4529 | No |
| 42 | FOXQ1 | forkhead box Q1 [Source:HGNC Symbol;Acc:HGNC:20951] | 23494 | 0.000 | -0.4529 | No |
| 43 | FOXF2 | forkhead box F2 [Source:HGNC Symbol;Acc:HGNC:3810] | 23652 | 0.000 | -0.4572 | No |
| 44 | RN7SL221P | RNA, 7SL, cytoplasmic 221, pseudogene [Source:HGNC Symbol;Acc:HGNC:46237] | 24485 | 0.000 | -0.4797 | No |
| 45 | SLC22A23 | solute carrier family 22 member 23 [Source:HGNC Symbol;Acc:HGNC:21106] | 26740 | 0.000 | -0.5405 | No |
| 46 | FOXCUT | FOXC1 upstream transcript [Source:HGNC Symbol;Acc:HGNC:50650] | 26853 | 0.000 | -0.5436 | No |
| 47 | MIR4645 | microRNA 4645 [Source:HGNC Symbol;Acc:HGNC:41689] | 26931 | 0.000 | -0.5457 | No |
| 48 | BTF3P7 | basic transcription factor 3 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:38569] | 28743 | -0.155 | -0.5891 | No |
| 49 | PSMG4 | proteasome assembly chaperone 4 [Source:HGNC Symbol;Acc:HGNC:21108] | 28916 | -0.180 | -0.5873 | No |
| 50 | WRNIP1 | WRN helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876] | 30597 | -0.392 | -0.6188 | Yes |
| 51 | TUBB2BP1 | tubulin beta 2B class IIb pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42332] | 31151 | -0.474 | -0.6169 | Yes |
| 52 | PRPF4B | pre-mRNA processing factor 4B [Source:HGNC Symbol;Acc:HGNC:17346] | 31220 | -0.487 | -0.6014 | Yes |
| 53 | CDYL | chromodomain Y like [Source:HGNC Symbol;Acc:HGNC:1811] | 31638 | -0.555 | -0.5930 | Yes |
| 54 | SERPINB9 | serpin family B member 9 [Source:HGNC Symbol;Acc:HGNC:8955] | 31658 | -0.557 | -0.5737 | Yes |
| 55 | HNRNPA1P37 | heterogeneous nuclear ribonucleoprotein A1 pseudogene 37 [Source:HGNC Symbol;Acc:HGNC:48766] | 31880 | -0.589 | -0.5588 | Yes |
| 56 | LY86 | lymphocyte antigen 86 [Source:HGNC Symbol;Acc:HGNC:16837] | 32064 | -0.627 | -0.5414 | Yes |
| 57 | EXOC2 | exocyst complex component 2 [Source:HGNC Symbol;Acc:HGNC:24968] | 32403 | -0.699 | -0.5258 | Yes |
| 58 | GLRX3P2 | glutaredoxin 3 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:49788] | 32490 | -0.719 | -0.5025 | Yes |
| 59 | FARS2 | phenylalanyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21062] | 32497 | -0.720 | -0.4771 | Yes |
| 60 | TUBB2B | tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829] | 33207 | -0.894 | -0.4645 | Yes |
| 61 | GMDS | GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369] | 33218 | -0.898 | -0.4329 | Yes |
| 62 | TUBB2A | tubulin beta 2A class IIa [Source:HGNC Symbol;Acc:HGNC:12412] | 33388 | -0.947 | -0.4038 | Yes |
| 63 | FOXC1 | forkhead box C1 [Source:HGNC Symbol;Acc:HGNC:3800] | 33674 | -1.026 | -0.3751 | Yes |
| 64 | NRN1 | neuritin 1 [Source:HGNC Symbol;Acc:HGNC:17972] | 33798 | -1.053 | -0.3410 | Yes |
| 65 | SERPINB1 | serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311] | 34132 | -1.155 | -0.3090 | Yes |
| 66 | PKMP5 | pyruvate kinase M1/2 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:44247] | 34378 | -1.245 | -0.2714 | Yes |
| 67 | SERPINB6 | serpin family B member 6 [Source:HGNC Symbol;Acc:HGNC:8950] | 34389 | -1.248 | -0.2273 | Yes |
| 68 | DUSP22 | dual specificity phosphatase 22 [Source:HGNC Symbol;Acc:HGNC:16077] | 35328 | -1.687 | -0.1928 | Yes |
| 69 | ECI2 | enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601] | 35615 | -1.861 | -0.1344 | Yes |
| 70 | NQO2 | N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856] | 36219 | -2.342 | -0.0675 | Yes |
| 71 | BPHL | biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094] | 36413 | -2.563 | 0.0183 | Yes |
