Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #WT_GAQ_versus_WT_NA.greenbergcls.cls #WT_GAQ_versus_WT_NA_repos |
| Phenotype | greenbergcls.cls#WT_GAQ_versus_WT_NA_repos |
| Upregulated in class | WT_NA |
| GeneSet | CHR7P21 |
| Enrichment Score (ES) | -0.65370214 |
| Normalized Enrichment Score (NES) | -1.3462243 |
| Nominal p-value | 0.02625 |
| FDR q-value | 0.4031236 |
| FWER p-Value | 0.998 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | ETV1 | ETS variant transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3490] | 1994 | 0.902 | -0.0265 | No |
| 2 | SCIN | scinderin [Source:HGNC Symbol;Acc:HGNC:21695] | 2369 | 0.763 | -0.0134 | No |
| 3 | NPM1P13 | nucleophosmin 1 pseudogene 13 [Source:HGNC Symbol;Acc:HGNC:7915] | 2448 | 0.737 | 0.0068 | No |
| 4 | AHR | aryl hydrocarbon receptor [Source:HGNC Symbol;Acc:HGNC:348] | 3688 | 0.444 | -0.0131 | No |
| 5 | RPL23AP52 | ribosomal protein L23a pseudogene 52 [Source:HGNC Symbol;Acc:HGNC:36723] | 4145 | 0.366 | -0.0143 | No |
| 6 | RAD17P1 | RAD17 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:9808] | 4252 | 0.347 | -0.0067 | No |
| 7 | PRPS1L1 | phosphoribosyl pyrophosphate synthetase 1 like 1 [Source:HGNC Symbol;Acc:HGNC:9463] | 4817 | 0.260 | -0.0140 | No |
| 8 | ARL4A | ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695] | 5355 | 0.177 | -0.0231 | No |
| 9 | AC005550.2 | novel transcript, antisense to MEOX2 | 5810 | 0.112 | -0.0320 | No |
| 10 | TAS2R2P | taste 2 receptor member 2, pseudogene [Source:HGNC Symbol;Acc:HGNC:20615] | 7826 | 0.000 | -0.0864 | No |
| 11 | AC099342.1 | novel transcript | 7832 | 0.000 | -0.0866 | No |
| 12 | RBMX2P4 | RBMX2 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:39926] | 8043 | 0.000 | -0.0922 | No |
| 13 | LINC01162 | long intergenic non-protein coding RNA 1162 [Source:HGNC Symbol;Acc:HGNC:49528] | 9060 | 0.000 | -0.1197 | No |
| 14 | THSD7A | thrombospondin type 1 domain containing 7A [Source:HGNC Symbol;Acc:HGNC:22207] | 9592 | 0.000 | -0.1340 | No |
| 15 | RNU6-534P | RNA, U6 small nuclear 534, pseudogene [Source:HGNC Symbol;Acc:HGNC:47497] | 10348 | 0.000 | -0.1544 | No |
| 16 | COL28A1 | collagen type XXVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:22442] | 10677 | 0.000 | -0.1633 | No |
| 17 | LRRC72 | leucine rich repeat containing 72 [Source:HGNC Symbol;Acc:HGNC:42972] | 11679 | 0.000 | -0.1903 | No |
| 18 | AGR2 | anterior gradient 2, protein disulphide isomerase family member [Source:HGNC Symbol;Acc:HGNC:328] | 12335 | 0.000 | -0.2080 | No |
| 19 | AGR3 | anterior gradient 3, protein disulphide isomerase family member [Source:HGNC Symbol;Acc:HGNC:24167] | 12338 | 0.000 | -0.2081 | No |
| 20 | LINC02587 | long intergenic non-protein coding RNA 2587 [Source:HGNC Symbol;Acc:HGNC:50672] | 12998 | 0.000 | -0.2259 | No |
| 21 | TMEM196 | transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431] | 13413 | 0.000 | -0.2371 | No |
| 22 | AC005083.1 | novel transcript | 13730 | 0.000 | -0.2456 | No |
| 23 | SOSTDC1 | sclerostin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21748] | 14408 | 0.000 | -0.2639 | No |
| 24 | NXPH1 | neurexophilin 1 [Source:HGNC Symbol;Acc:HGNC:20693] | 14923 | 0.000 | -0.2778 | No |
| 25 | MIR1302-6 | microRNA 1302-6 [Source:HGNC Symbol;Acc:HGNC:35298] | 15498 | 0.000 | -0.2933 | No |
| 26 | RPL36AP29 | ribosomal protein L36a pseudogene 29 [Source:HGNC Symbol;Acc:HGNC:36897] | 15882 | 0.000 | -0.3036 | No |
| 27 | SNORA63 | small nucleolar RNA, H/ACA box 63 [Source:HGNC Symbol;Acc:HGNC:10106] | 16266 | 0.000 | -0.3140 | No |
| 28 | TWIST1 | twist family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:12428] | 17282 | 0.000 | -0.3414 | No |
| 29 | RPL6P21 | ribosomal protein L6 pseudogene 21 [Source:HGNC Symbol;Acc:HGNC:35994] | 17789 | 0.000 | -0.3550 | No |
| 30 | RN7SKP266 | RN7SK pseudogene 266 [Source:HGNC Symbol;Acc:HGNC:45990] | 18061 | 0.000 | -0.3624 | No |
| 31 | RN7SKP228 | RN7SK pseudogene 228 [Source:HGNC Symbol;Acc:HGNC:45952] | 18161 | 0.000 | -0.3650 | No |
| 32 | GTF3AP5 | general transcription factor IIIA pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:49748] | 18284 | 0.000 | -0.3683 | No |
| 33 | CRPPA-AS1 | CRPPA antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48962] | 18477 | 0.000 | -0.3735 | No |
| 34 | RPS26P30 | ribosomal protein S26 pseudogene 30 [Source:HGNC Symbol;Acc:HGNC:35574] | 19104 | 0.000 | -0.3904 | No |
| 35 | AC005532.1 | novel transcript | 20914 | 0.000 | -0.4393 | No |
| 36 | BRWD1P3 | bromodomain and WD repeat domain containing 1 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:51530] | 20998 | 0.000 | -0.4415 | No |
| 37 | MIR3146 | microRNA 3146 [Source:HGNC Symbol;Acc:HGNC:38368] | 21176 | 0.000 | -0.4463 | No |
| 38 | VWDE | von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897] | 21197 | 0.000 | -0.4469 | No |
| 39 | MACC1 | MET transcriptional regulator MACC1 [Source:HGNC Symbol;Acc:HGNC:30215] | 23282 | 0.000 | -0.5032 | No |
| 40 | FERD3L | Fer3 like bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:16660] | 23290 | 0.000 | -0.5034 | No |
| 41 | MEOX2 | mesenchyme homeobox 2 [Source:HGNC Symbol;Acc:HGNC:7014] | 23328 | 0.000 | -0.5044 | No |
| 42 | MACC1-AS1 | MACC1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41257] | 23424 | 0.000 | -0.5069 | No |
| 43 | AC013470.2 | novel protein | 25674 | 0.000 | -0.5677 | No |
| 44 | ITGB8 | integrin subunit beta 8 [Source:HGNC Symbol;Acc:HGNC:6163] | 26428 | 0.000 | -0.5880 | No |
| 45 | ABCB5 | ATP binding cassette subfamily B member 5 [Source:HGNC Symbol;Acc:HGNC:46] | 26824 | 0.000 | -0.5987 | No |
| 46 | DGKB | diacylglycerol kinase beta [Source:HGNC Symbol;Acc:HGNC:2850] | 27154 | 0.000 | -0.6076 | No |
| 47 | NDUFA4 | NDUFA4 mitochondrial complex associated [Source:HGNC Symbol;Acc:HGNC:7687] | 27605 | -0.021 | -0.6191 | No |
| 48 | MGC4859 | uncharacterized LOC79150 [Source:NCBI gene (formerly Entrezgene);Acc:79150] | 27919 | -0.062 | -0.6257 | No |
| 49 | RNMTL1P2 | RNA methyltransferase like 1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:44906] | 28098 | -0.080 | -0.6280 | No |
| 50 | MIOS | meiosis regulator for oocyte development [Source:HGNC Symbol;Acc:HGNC:21905] | 28507 | -0.130 | -0.6351 | No |
| 51 | NPM1P11 | nucleophosmin 1 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:7913] | 28668 | -0.146 | -0.6350 | No |
| 52 | EEF1A1P26 | eukaryotic translation elongation factor 1 alpha 1 pseudogene 26 [Source:HGNC Symbol;Acc:HGNC:37899] | 28953 | -0.186 | -0.6370 | No |
| 53 | RPL23P8 | ribosomal protein L23 pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:36225] | 29332 | -0.228 | -0.6403 | No |
| 54 | CRPPA | CDP-L-ribitol pyrophosphorylase A [Source:HGNC Symbol;Acc:HGNC:37276] | 29412 | -0.240 | -0.6352 | No |
| 55 | EEF1A1P27 | eukaryotic translation elongation factor 1 alpha 1 pseudogene 27 [Source:HGNC Symbol;Acc:HGNC:37900] | 30033 | -0.316 | -0.6423 | Yes |
| 56 | RPL21P75 | ribosomal protein L21 pseudogene 75 [Source:HGNC Symbol;Acc:HGNC:36460] | 30090 | -0.322 | -0.6340 | Yes |
| 57 | PHF14 | PHD finger protein 14 [Source:HGNC Symbol;Acc:HGNC:22203] | 30804 | -0.423 | -0.6404 | Yes |
| 58 | HSPA8P8 | heat shock protein family A (Hsp70) member 8 pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:44923] | 31280 | -0.497 | -0.6382 | Yes |
| 59 | SP8 | Sp8 transcription factor [Source:HGNC Symbol;Acc:HGNC:19196] | 31855 | -0.585 | -0.6359 | Yes |
| 60 | GLCCI1 | glucocorticoid induced 1 [Source:HGNC Symbol;Acc:HGNC:18713] | 31936 | -0.599 | -0.6199 | Yes |
| 61 | TMEM106B | transmembrane protein 106B [Source:HGNC Symbol;Acc:HGNC:22407] | 32515 | -0.725 | -0.6135 | Yes |
| 62 | SNX13 | sorting nexin 13 [Source:HGNC Symbol;Acc:HGNC:21335] | 32641 | -0.755 | -0.5940 | Yes |
| 63 | BZW2 | basic leucine zipper and W2 domains 2 [Source:HGNC Symbol;Acc:HGNC:18808] | 32779 | -0.787 | -0.5738 | Yes |
| 64 | GAPDHP68 | glyceraldehyde 3 phosphate dehydrogenase pseudogene 68 [Source:HGNC Symbol;Acc:HGNC:4146] | 32841 | -0.802 | -0.5511 | Yes |
| 65 | UMAD1 | UBAP1-MVB12-associated (UMA) domain containing 1 [Source:HGNC Symbol;Acc:HGNC:48955] | 33719 | -1.036 | -0.5433 | Yes |
| 66 | RPA3 | replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291] | 35321 | -1.686 | -0.5354 | Yes |
| 67 | CCNB2P1 | cyclin B2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:50850] | 35809 | -2.006 | -0.4877 | Yes |
| 68 | ICA1 | islet cell autoantigen 1 [Source:HGNC Symbol;Acc:HGNC:5343] | 36423 | -2.579 | -0.4260 | Yes |
| 69 | ANKMY2 | ankyrin repeat and MYND domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25370] | 36468 | -2.640 | -0.3471 | Yes |
| 70 | AGMO | alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784] | 36980 | -3.777 | -0.2462 | Yes |
| 71 | HDAC9 | histone deacetylase 9 [Source:HGNC Symbol;Acc:HGNC:14065] | 37011 | -3.934 | -0.1277 | Yes |
| 72 | TSPAN13 | tetraspanin 13 [Source:HGNC Symbol;Acc:HGNC:21643] | 37058 | -4.275 | 0.0009 | Yes |
