Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_GAQ_versus_WT_NA.greenbergcls.cls
#WT_GAQ_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetCHR7Q36
Enrichment Score (ES)-0.6398772
Normalized Enrichment Score (NES)-1.394794
Nominal p-value0.006802721
FDR q-value0.26217425
FWER p-Value0.933
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR7Q36   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GBX1gastrulation brain homeobox 1 [Source:HGNC Symbol;Acc:HGNC:4185]2442.8100.0380No
2RHEBRas homolog, mTORC1 binding [Source:HGNC Symbol;Acc:HGNC:10011]10181.4200.0397No
3ABCF2ATP binding cassette subfamily F member 2 [Source:HGNC Symbol;Acc:HGNC:71]11741.3080.0562No
4PIP5K1P2phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:38068]17651.0000.0561No
5SLC4A2solute carrier family 4 member 2 [Source:HGNC Symbol;Acc:HGNC:11028]17870.9920.0713No
6NOM1nucleolar protein with MIF4G domain 1 [Source:HGNC Symbol;Acc:HGNC:13244]25080.7200.0633No
7CHPF2chondroitin polymerizing factor 2 [Source:HGNC Symbol;Acc:HGNC:29270]25460.7110.0736No
8SEPTIN7P6septin 7 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:38042]30610.5770.0688No
9MIR671microRNA 671 [Source:HGNC Symbol;Acc:HGNC:33134]45230.3040.0341No
10UBE3Cubiquitin protein ligase E3C [Source:HGNC Symbol;Acc:HGNC:16803]46940.2810.0340No
11GIMAP5GTPase, IMAP family member 5 [Source:HGNC Symbol;Acc:HGNC:18005]56710.1320.0097No
12ZNF746zinc finger protein 746 [Source:HGNC Symbol;Acc:HGNC:21948]59280.0960.0043No
13TMUB1transmembrane and ubiquitin like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21709]60530.0820.0022No
14SMARCD3SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:HGNC:11108]62390.059-0.0018No
15DNAJB6DnaJ heat shock protein family (Hsp40) member B6 [Source:HGNC Symbol;Acc:HGNC:14888]65090.027-0.0087No
16FASTKFas activated serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:24676]65170.026-0.0085No
17AOC1amine oxidase copper containing 1 [Source:HGNC Symbol;Acc:HGNC:80]67750.000-0.0154No
18LINC00689long intergenic non-protein coding RNA 689 [Source:HGNC Symbol;Acc:HGNC:27217]68500.000-0.0174No
19MIR153-2microRNA 153-2 [Source:HGNC Symbol;Acc:HGNC:31540]70440.000-0.0226No
20GIMAP1-GIMAP5GIMAP1-GIMAP5 readthrough [Source:HGNC Symbol;Acc:HGNC:51257]71930.000-0.0266No
21LINC01287long intergenic non-protein coding RNA 1287 [Source:HGNC Symbol;Acc:HGNC:50351]74900.000-0.0347No
22CRYGNcrystallin gamma N [Source:HGNC Symbol;Acc:HGNC:20458]75660.000-0.0367No
23PAXBP1P1PAX3 and PAX7 binding protein 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:50352]76320.000-0.0384No
24CCT8L1Pchaperonin containing TCP1 subunit 8 like 1, pseudogene [Source:HGNC Symbol;Acc:HGNC:32153]80340.000-0.0493No
25ASIC3acid sensing ion channel subunit 3 [Source:HGNC Symbol;Acc:HGNC:101]82820.000-0.0560No
26AC093583.1uncharacterized LOC644090 [Source:NCBI gene (formerly Entrezgene);Acc:644090]83980.000-0.0591No
27CNPY1canopy FGF signaling regulator 1 [Source:HGNC Symbol;Acc:HGNC:27786]84080.000-0.0593No
28LINC01003long intergenic non-protein coding RNA 1003 [Source:HGNC Symbol;Acc:HGNC:48957]84210.000-0.0597No
29LINC01006long intergenic non-protein coding RNA 1006 [Source:HGNC Symbol;Acc:HGNC:48971]84230.000-0.0597No
30LINC01022long intergenic non-protein coding RNA 1022 [Source:HGNC Symbol;Acc:HGNC:48998]93400.000-0.0845No
31AC004941.1uncharacterized LOC101928733 [Source:NCBI gene (formerly Entrezgene);Acc:101928733]97350.000-0.0951No
32AC005481.1novel transcript, antisense to PTPRN2107500.000-0.1226No
33SSPOPSCO-spondin, pseudogene [Source:HGNC Symbol;Acc:HGNC:21998]107930.000-0.1237No
34PTPRN2protein tyrosine phosphatase receptor type N2 [Source:HGNC Symbol;Acc:HGNC:9677]110130.000-0.1296No
35BLACEB cell acute lymphoblastic leukemia expressed [Source:HGNC Symbol;Acc:HGNC:20484]113720.000-0.1393No
36LINC00996long intergenic non-protein coding RNA 996 [Source:HGNC Symbol;Acc:HGNC:27800]123370.000-0.1654No
37RNU4-31PRNA, U4 small nuclear 31, pseudogene [Source:HGNC Symbol;Acc:HGNC:46967]124730.000-0.1691No
38GHET1gastric carcinoma proliferation enhancing transcript 1 [Source:HGNC Symbol;Acc:HGNC:49425]131700.000-0.1879No
39LINC00244long intergenic non-protein coding RNA 244 [Source:HGNC Symbol;Acc:HGNC:13245]134840.000-0.1964No
40VIPR2vasoactive intestinal peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:12695]135890.000-0.1992No
41THAP5P1THAP domain containing 5 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:22340]151920.000-0.2425No
42MIR5707microRNA 5707 [Source:HGNC Symbol;Acc:HGNC:43449]154270.000-0.2489No
43RNU6-650PRNA, U6 small nuclear 650, pseudogene [Source:HGNC Symbol;Acc:HGNC:47613]156730.000-0.2555No
44HTR5A5-hydroxytryptamine receptor 5A [Source:HGNC Symbol;Acc:HGNC:5300]157460.000-0.2574No
45MNX1-AS1MNX1 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:48954]158730.000-0.2608No
46MNX1-AS2MNX1 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:40278]158740.000-0.2608No
47RN7SL569PRNA, 7SL, cytoplasmic 569, pseudogene [Source:HGNC Symbol;Acc:HGNC:46585]160950.000-0.2668No
48EN2engrailed homeobox 2 [Source:HGNC Symbol;Acc:HGNC:3343]164990.000-0.2777No
49RNU6-604PRNA, U6 small nuclear 604, pseudogene [Source:HGNC Symbol;Acc:HGNC:47567]170480.000-0.2925No
50RN7SL521PRNA, 7SL, cytoplasmic 521, pseudogene [Source:HGNC Symbol;Acc:HGNC:46537]174270.000-0.3028No
51PRKAG2-AS1PRKAG2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40468]175960.000-0.3073No
52DPP6dipeptidyl peptidase like 6 [Source:HGNC Symbol;Acc:HGNC:3010]179560.000-0.3170No
53RN7SKP280RN7SK pseudogene 280 [Source:HGNC Symbol;Acc:HGNC:46004]180200.000-0.3187No
54WDR86WD repeat domain 86 [Source:HGNC Symbol;Acc:HGNC:28020]183810.000-0.3285No
55WDR86-AS1WDR86 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41186]184710.000-0.3309No
56IQCA1LIQ motif containing with AAA domain 1 like [Source:HGNC Symbol;Acc:HGNC:22831]184890.000-0.3313No
57GIMAP3PGTPase, IMAP family member 3 pseudogene [Source:HGNC Symbol;Acc:HGNC:30975]189350.000-0.3434No
58AC099552.2novel transcript189420.000-0.3435No
59KRBA1KRAB-A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22228]192390.000-0.3515No
60PAXIP1-AS2PAXIP1 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:48958]192720.000-0.3524No
61MNX1motor neuron and pancreas homeobox 1 [Source:HGNC Symbol;Acc:HGNC:4979]194990.000-0.3585No
62RN7SL76PRNA, 7SL, cytoplasmic 76, pseudogene [Source:HGNC Symbol;Acc:HGNC:46092]196470.000-0.3625No
63RN7SL72PRNA, 7SL, cytoplasmic 72, pseudogene [Source:HGNC Symbol;Acc:HGNC:46088]196590.000-0.3628No
64HTR5A-AS1HTR5A antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48956]201020.000-0.3748No
65GALNTL5polypeptide N-acetylgalactosaminyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:21725]204180.000-0.3833No
66MIR3907microRNA 3907 [Source:HGNC Symbol;Acc:HGNC:38988]208160.000-0.3940No
67SHHsonic hedgehog signaling molecule [Source:HGNC Symbol;Acc:HGNC:10848]208400.000-0.3946No
68RNU7-20PRNA, U7 small nuclear 20 pseudogene [Source:HGNC Symbol;Acc:HGNC:34116]209690.000-0.3981No
69ZNF425zinc finger protein 425 [Source:HGNC Symbol;Acc:HGNC:20690]221820.000-0.4309No
70RNY3RNA, Ro60-associated Y3 [Source:HGNC Symbol;Acc:HGNC:10243]226310.000-0.4430No
71RNY4RNA, Ro60-associated Y4 [Source:HGNC Symbol;Acc:HGNC:10244]226320.000-0.4430No
72MIR595microRNA 595 [Source:HGNC Symbol;Acc:HGNC:32851]227240.000-0.4455No
73RN7SL845PRNA, 7SL, cytoplasmic 845, pseudogene [Source:HGNC Symbol;Acc:HGNC:46861]229560.000-0.4517No
74AC009403.1novel transcript, antisense to RBM33230790.000-0.4550No
75C7orf33chromosome 7 open reading frame 33 [Source:HGNC Symbol;Acc:HGNC:21724]234630.000-0.4654No
76ATP6V0E2-AS1ATP6V0E2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44180]241840.000-0.4849No
77ZBED6CLZBED6 C-terminal like [Source:HGNC Symbol;Acc:HGNC:21720]242930.000-0.4878No
78RARRES2retinoic acid receptor responder 2 [Source:HGNC Symbol;Acc:HGNC:9868]243640.000-0.4897No
79YBX1P4Y-box binding protein 1 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:42425]250820.000-0.5091No
80GIMAP1GTPase, IMAP family member 1 [Source:HGNC Symbol;Acc:HGNC:23237]250970.000-0.5095No
81GIMAP2GTPase, IMAP family member 2 [Source:HGNC Symbol;Acc:HGNC:21789]250980.000-0.5095No
82GIMAP4GTPase, IMAP family member 4 [Source:HGNC Symbol;Acc:HGNC:21872]250990.000-0.5095No
83GIMAP6GTPase, IMAP family member 6 [Source:HGNC Symbol;Acc:HGNC:21918]251010.000-0.5095No
84GIMAP7GTPase, IMAP family member 7 [Source:HGNC Symbol;Acc:HGNC:22404]251020.000-0.5095No
85GIMAP8GTPase, IMAP family member 8 [Source:HGNC Symbol;Acc:HGNC:21792]251030.000-0.5095No
86AC006372.3novel transcript267730.000-0.5547No
87TMEM176Btransmembrane protein 176B [Source:HGNC Symbol;Acc:HGNC:29596]27604-0.021-0.5768No
88ZNF786zinc finger protein 786 [Source:HGNC Symbol;Acc:HGNC:21806]27988-0.067-0.5861No
89COX6B1P1cytochrome c oxidase subunit 6B1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:2281]28417-0.121-0.5957No
90KCNH2potassium voltage-gated channel subfamily H member 2 [Source:HGNC Symbol;Acc:HGNC:6251]28438-0.122-0.5943No
91ZNF767Pzinc finger family member 767, pseudogene [Source:HGNC Symbol;Acc:HGNC:21884]29781-0.285-0.6261No
92XRCC2X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]30026-0.316-0.6277No
93ABCB8ATP binding cassette subfamily B member 8 [Source:HGNC Symbol;Acc:HGNC:49]30303-0.351-0.6296No
94RPS27AP12ribosomal protein S27a pseudogene 12 [Source:HGNC Symbol;Acc:HGNC:35732]30683-0.404-0.6335Yes
95ZNF282zinc finger protein 282 [Source:HGNC Symbol;Acc:HGNC:13076]30822-0.426-0.6304Yes
96RNF32ring finger protein 32 [Source:HGNC Symbol;Acc:HGNC:17118]30855-0.430-0.6245Yes
97ZNF212zinc finger protein 212 [Source:HGNC Symbol;Acc:HGNC:13004]30896-0.436-0.6186Yes
98ALDH7A1P3aldehyde dehydrogenase 7 family member A1 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:880]30919-0.440-0.6122Yes
99RBM33RNA binding motif protein 33 [Source:HGNC Symbol;Acc:HGNC:27223]31092-0.466-0.6095Yes
100CUL1cullin 1 [Source:HGNC Symbol;Acc:HGNC:2551]31324-0.503-0.6077Yes
101ATP5PBP3ATP synthase peripheral stalk-membrane subunit b pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:39744]31355-0.506-0.6005Yes
102BET1P1Bet1 golgi vesicular membrane trafficking protein pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:51363]31670-0.559-0.6001Yes
103RNY1RNA, Ro60-associated Y1 [Source:HGNC Symbol;Acc:HGNC:10242]31779-0.574-0.5939Yes
104ZNF775zinc finger protein 775 [Source:HGNC Symbol;Acc:HGNC:28501]31920-0.597-0.5882Yes
105PDIA4protein disulfide isomerase family A member 4 [Source:HGNC Symbol;Acc:HGNC:30167]32033-0.620-0.5814Yes
106ACTR3Cactin related protein 3C [Source:HGNC Symbol;Acc:HGNC:37282]32058-0.626-0.5721Yes
107ACTR3Bactin related protein 3B [Source:HGNC Symbol;Acc:HGNC:17256]32197-0.652-0.5655Yes
108AGAP3ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 [Source:HGNC Symbol;Acc:HGNC:16923]32849-0.804-0.5704Yes
109FABP5P3fatty acid binding protein 5 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:22573]32893-0.814-0.5586Yes
110TMEM176Atransmembrane protein 176A [Source:HGNC Symbol;Acc:HGNC:24930]32960-0.832-0.5472Yes
111ATP6V0E2ATPase H+ transporting V0 subunit e2 [Source:HGNC Symbol;Acc:HGNC:21723]33533-0.981-0.5471Yes
112ZNF783zinc finger family member 783 [Source:HGNC Symbol;Acc:HGNC:27222]33697-1.032-0.5351Yes
113NPM1P12nucleophosmin 1 pseudogene 12 [Source:HGNC Symbol;Acc:HGNC:7914]33817-1.059-0.5215Yes
114NUB1negative regulator of ubiquitin like proteins 1 [Source:HGNC Symbol;Acc:HGNC:17623]33835-1.064-0.5050Yes
115REPIN1replication initiator 1 [Source:HGNC Symbol;Acc:HGNC:17922]34124-1.151-0.4946Yes
116ZNF777zinc finger protein 777 [Source:HGNC Symbol;Acc:HGNC:22213]34513-1.299-0.4844Yes
117CDK5cyclin dependent kinase 5 [Source:HGNC Symbol;Acc:HGNC:1774]34644-1.345-0.4666Yes
118INSIG1insulin induced gene 1 [Source:HGNC Symbol;Acc:HGNC:6083]34974-1.500-0.4517Yes
119STRADBP1STE20-related kinase adaptor beta pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:22478]35002-1.518-0.4283Yes
120LRRC61leucine rich repeat containing 61 [Source:HGNC Symbol;Acc:HGNC:21704]35108-1.574-0.4061Yes
121ESYT2extended synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:22211]35124-1.581-0.3814Yes
122ASB10ankyrin repeat and SOCS box containing 10 [Source:HGNC Symbol;Acc:HGNC:17185]35139-1.588-0.3566Yes
123KMT2Clysine methyltransferase 2C [Source:HGNC Symbol;Acc:HGNC:13726]35223-1.637-0.3328Yes
124ZNF467zinc finger protein 467 [Source:HGNC Symbol;Acc:HGNC:23154]35300-1.675-0.3083Yes
125ZNF398zinc finger protein 398 [Source:HGNC Symbol;Acc:HGNC:18373]35453-1.761-0.2844Yes
126PAXIP1PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]35465-1.771-0.2566Yes
127LMBR1limb development membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:13243]35475-1.778-0.2286Yes
128NCAPG2non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]35564-1.825-0.2020Yes
129EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]35653-1.889-0.1744Yes
130NOS3nitric oxide synthase 3 [Source:HGNC Symbol;Acc:HGNC:7876]35881-2.064-0.1477Yes
131ZNF862zinc finger protein 862 [Source:HGNC Symbol;Acc:HGNC:34519]36269-2.401-0.1201Yes
132GALNT11polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]36374-2.508-0.0830Yes
133ATG9Bautophagy related 9B [Source:HGNC Symbol;Acc:HGNC:21899]36647-2.896-0.0444Yes
134PRKAG2protein kinase AMP-activated non-catalytic subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:9386]36918-3.5490.0047Yes
Table: GSEA details [plain text format]



Fig 2: CHR7Q36   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR7Q36: Random ES distribution   
Gene set null distribution of ES for CHR7Q36