Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #WT_GAQ_versus_WT_NA.greenbergcls.cls #WT_GAQ_versus_WT_NA_repos |
| Phenotype | greenbergcls.cls#WT_GAQ_versus_WT_NA_repos |
| Upregulated in class | WT_GAQ |
| GeneSet | CHR8Q12 |
| Enrichment Score (ES) | 0.4522191 |
| Normalized Enrichment Score (NES) | 1.127702 |
| Nominal p-value | 0.16494845 |
| FDR q-value | 0.73004097 |
| FWER p-Value | 1.0 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | LYN | LYN proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6735] | 229 | 2.890 | 0.1081 | Yes |
| 2 | PDCL3P1 | PDCL3 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:31826] | 471 | 2.158 | 0.1870 | Yes |
| 3 | TMEM68 | transmembrane protein 68 [Source:HGNC Symbol;Acc:HGNC:26510] | 582 | 1.958 | 0.2615 | Yes |
| 4 | PENK | proenkephalin [Source:HGNC Symbol;Acc:HGNC:8831] | 767 | 1.660 | 0.3222 | Yes |
| 5 | TGS1 | trimethylguanosine synthase 1 [Source:HGNC Symbol;Acc:HGNC:17843] | 1134 | 1.337 | 0.3652 | Yes |
| 6 | CHD7 | chromodomain helicase DNA binding protein 7 [Source:HGNC Symbol;Acc:HGNC:20626] | 1374 | 1.165 | 0.4049 | Yes |
| 7 | YTHDF3 | YTH N6-methyladenosine RNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:26465] | 2446 | 0.738 | 0.4051 | Yes |
| 8 | NARS1P2 | asparaginyl-tRNA synthetase 1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:50481] | 3370 | 0.507 | 0.4002 | Yes |
| 9 | RPS20 | ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405] | 3750 | 0.433 | 0.4071 | Yes |
| 10 | RAB2A | RAB2A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9763] | 3754 | 0.433 | 0.4241 | Yes |
| 11 | UBXN2B | UBX domain protein 2B [Source:HGNC Symbol;Acc:HGNC:27035] | 3976 | 0.393 | 0.4337 | Yes |
| 12 | CLVS1 | clavesin 1 [Source:HGNC Symbol;Acc:HGNC:23139] | 4325 | 0.335 | 0.4376 | Yes |
| 13 | RPL30P10 | ribosomal protein L30 pseudogene 10 [Source:HGNC Symbol;Acc:HGNC:36822] | 4645 | 0.289 | 0.4404 | Yes |
| 14 | NPM1P6 | nucleophosmin 1 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:7926] | 4830 | 0.259 | 0.4457 | Yes |
| 15 | SDCBP | syndecan binding protein [Source:HGNC Symbol;Acc:HGNC:10662] | 4940 | 0.240 | 0.4522 | Yes |
| 16 | ASPH | aspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757] | 5660 | 0.133 | 0.4381 | No |
| 17 | GGH | gamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248] | 5978 | 0.090 | 0.4330 | No |
| 18 | CHCHD7 | coiled-coil-helix-coiled-coil-helix domain containing 7 [Source:HGNC Symbol;Acc:HGNC:28314] | 6304 | 0.051 | 0.4263 | No |
| 19 | AC009597.1 | novel transcript | 6727 | 0.000 | 0.4149 | No |
| 20 | RNU6-596P | RNA, U6 small nuclear 596, pseudogene [Source:HGNC Symbol;Acc:HGNC:47559] | 6822 | 0.000 | 0.4123 | No |
| 21 | IFITM8P | interferon induced transmembrane protein 8 pseudogene [Source:HGNC Symbol;Acc:HGNC:32202] | 6828 | 0.000 | 0.4122 | No |
| 22 | AC012349.1 | novel transcript | 7264 | 0.000 | 0.4004 | No |
| 23 | AC011124.2 | novel transcript | 7310 | 0.000 | 0.3992 | No |
| 24 | LINC01301 | long intergenic non-protein coding RNA 1301 [Source:HGNC Symbol;Acc:HGNC:50464] | 7401 | 0.000 | 0.3968 | No |
| 25 | LINC01289 | long intergenic non-protein coding RNA 1289 [Source:HGNC Symbol;Acc:HGNC:50354] | 7484 | 0.000 | 0.3946 | No |
| 26 | LINC01606 | long intergenic non-protein coding RNA 1606 [Source:HGNC Symbol;Acc:HGNC:51656] | 7677 | 0.000 | 0.3894 | No |
| 27 | LINC01602 | long intergenic non-protein coding RNA 1602 [Source:HGNC Symbol;Acc:HGNC:51634] | 7687 | 0.000 | 0.3892 | No |
| 28 | BHLHE22 | basic helix-loop-helix family member e22 [Source:HGNC Symbol;Acc:HGNC:11963] | 8542 | 0.000 | 0.3661 | No |
| 29 | KRT8P3 | keratin 8 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:31056] | 10963 | 0.000 | 0.3007 | No |
| 30 | AC092819.1 | novel transcript | 11592 | 0.000 | 0.2837 | No |
| 31 | RNU4-50P | RNA, U4 small nuclear 50, pseudogene [Source:HGNC Symbol;Acc:HGNC:46986] | 11765 | 0.000 | 0.2791 | No |
| 32 | AC068075.1 | novel transcript | 12119 | 0.000 | 0.2695 | No |
| 33 | LINC00968 | long intergenic non-protein coding RNA 968 [Source:HGNC Symbol;Acc:HGNC:48727] | 12321 | 0.000 | 0.2641 | No |
| 34 | TOX | thymocyte selection associated high mobility group box [Source:HGNC Symbol;Acc:HGNC:18988] | 12897 | 0.000 | 0.2486 | No |
| 35 | AC090200.1 | novel transcript | 13174 | 0.000 | 0.2411 | No |
| 36 | AC104051.2 | novel transcript | 13372 | 0.000 | 0.2358 | No |
| 37 | LINC02155 | long intergenic non-protein coding RNA 2155 [Source:HGNC Symbol;Acc:HGNC:53016] | 14344 | 0.000 | 0.2096 | No |
| 38 | NKAIN3 | sodium/potassium transporting ATPase interacting 3 [Source:HGNC Symbol;Acc:HGNC:26829] | 15779 | 0.000 | 0.1708 | No |
| 39 | CA8 | carbonic anhydrase 8 [Source:HGNC Symbol;Acc:HGNC:1382] | 15844 | 0.000 | 0.1691 | No |
| 40 | CERNA3 | competing endogenous lncRNA 3 for miR-645 [Source:HGNC Symbol;Acc:HGNC:53469] | 16545 | 0.000 | 0.1502 | No |
| 41 | RN7SL323P | RNA, 7SL, cytoplasmic 323, pseudogene [Source:HGNC Symbol;Acc:HGNC:46339] | 16774 | 0.000 | 0.1440 | No |
| 42 | AC090136.3 | novel transcript | 17210 | 0.000 | 0.1323 | No |
| 43 | RN7SL798P | RNA, 7SL, cytoplasmic 798, pseudogene [Source:HGNC Symbol;Acc:HGNC:46814] | 17746 | 0.000 | 0.1178 | No |
| 44 | XKR4 | XK related 4 [Source:HGNC Symbol;Acc:HGNC:29394] | 18406 | 0.000 | 0.1000 | No |
| 45 | RN7SL135P | RNA, 7SL, cytoplasmic 135, pseudogene [Source:HGNC Symbol;Acc:HGNC:46151] | 18412 | 0.000 | 0.0999 | No |
| 46 | RN7SKP97 | RN7SK pseudogene 97 [Source:HGNC Symbol;Acc:HGNC:45821] | 18715 | 0.000 | 0.0917 | No |
| 47 | MIR124-2 | microRNA 124-2 [Source:HGNC Symbol;Acc:HGNC:31503] | 18925 | 0.000 | 0.0861 | No |
| 48 | MOS | MOS proto-oncogene, serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:7199] | 18998 | 0.000 | 0.0841 | No |
| 49 | YTHDF3-AS1 | YTHDF3 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:48728] | 19142 | 0.000 | 0.0803 | No |
| 50 | RNA5SP267 | RNA, 5S ribosomal pseudogene 267 [Source:HGNC Symbol;Acc:HGNC:43167] | 19433 | 0.000 | 0.0724 | No |
| 51 | RNA5SP266 | RNA, 5S ribosomal pseudogene 266 [Source:HGNC Symbol;Acc:HGNC:43166] | 19434 | 0.000 | 0.0724 | No |
| 52 | RNA5SP265 | RNA, 5S ribosomal pseudogene 265 [Source:HGNC Symbol;Acc:HGNC:43165] | 19435 | 0.000 | 0.0724 | No |
| 53 | C1GALT1P3 | C1GALT1 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:51616] | 19670 | 0.000 | 0.0661 | No |
| 54 | AC090152.1 | novel transcript | 19735 | 0.000 | 0.0644 | No |
| 55 | MIR124-2HG | MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723] | 19776 | 0.000 | 0.0633 | No |
| 56 | RN7SKP135 | RN7SK pseudogene 135 [Source:HGNC Symbol;Acc:HGNC:45859] | 20409 | 0.000 | 0.0462 | No |
| 57 | SLC2A13P1 | SLC2A13 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:48929] | 20574 | 0.000 | 0.0418 | No |
| 58 | COX6CP8 | cytochrome c oxidase subunit 6C pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:49360] | 20956 | 0.000 | 0.0315 | No |
| 59 | CYP7B1 | cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652] | 21127 | 0.000 | 0.0269 | No |
| 60 | CYP7A1 | cytochrome P450 family 7 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2651] | 21150 | 0.000 | 0.0263 | No |
| 61 | AC021393.1 | uncharacterized LOC105375861 [Source:NCBI gene (formerly Entrezgene);Acc:105375861] | 21749 | 0.000 | 0.0101 | No |
| 62 | SNORD54 | small nucleolar RNA, C/D box 54 [Source:HGNC Symbol;Acc:HGNC:10204] | 22354 | 0.000 | -0.0062 | No |
| 63 | TTPA | alpha tocopherol transfer protein [Source:HGNC Symbol;Acc:HGNC:12404] | 22408 | 0.000 | -0.0076 | No |
| 64 | RNU6-13P | RNA, U6 small nuclear 13, pseudogene [Source:HGNC Symbol;Acc:HGNC:34257] | 22967 | 0.000 | -0.0227 | No |
| 65 | LINC00588 | long intergenic non-protein coding RNA 588 [Source:HGNC Symbol;Acc:HGNC:24494] | 24241 | 0.000 | -0.0571 | No |
| 66 | MIR4470 | microRNA 4470 [Source:HGNC Symbol;Acc:HGNC:41833] | 25623 | 0.000 | -0.0944 | No |
| 67 | SDR16C6P | short chain dehydrogenase/reductase family 16C member 6, pseudogene [Source:HGNC Symbol;Acc:HGNC:35413] | 26530 | 0.000 | -0.1189 | No |
| 68 | SDR16C5 | short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311] | 27456 | 0.000 | -0.1439 | No |
| 69 | NPM1P21 | nucleophosmin 1 pseudogene 21 [Source:HGNC Symbol;Acc:HGNC:13855] | 27580 | -0.018 | -0.1465 | No |
| 70 | RPL26P26 | ribosomal protein L26 pseudogene 26 [Source:HGNC Symbol;Acc:HGNC:35693] | 30299 | -0.350 | -0.2061 | No |
| 71 | RPL37P6 | ribosomal protein L37 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:31080] | 30643 | -0.398 | -0.1996 | No |
| 72 | BPNT2 | 3'(2'), 5'-bisphosphate nucleotidase 2 [Source:HGNC Symbol;Acc:HGNC:26019] | 30908 | -0.438 | -0.1894 | No |
| 73 | FAM110B | family with sequence similarity 110 member B [Source:HGNC Symbol;Acc:HGNC:28587] | 31111 | -0.469 | -0.1763 | No |
| 74 | PLAG1 | PLAG1 zinc finger [Source:HGNC Symbol;Acc:HGNC:9045] | 32891 | -0.813 | -0.1922 | No |
| 75 | SBF1P1 | SET binding factor 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:31098] | 33191 | -0.890 | -0.1650 | No |
| 76 | XRCC6P4 | X-ray repair cross complementing 6 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:45186] | 34131 | -1.155 | -0.1447 | No |
| 77 | SRPK2P | SRSF protein kinase 2 pseudogene [Source:HGNC Symbol;Acc:HGNC:30303] | 35591 | -1.843 | -0.1112 | No |
| 78 | SEPTIN10P1 | septin 10 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:40018] | 35676 | -1.906 | -0.0381 | No |
| 79 | NSMAF | neutral sphingomyelinase activation associated factor [Source:HGNC Symbol;Acc:HGNC:8017] | 35703 | -1.928 | 0.0375 | No |
