Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #WT_GAQ_versus_WT_NA.greenbergcls.cls #WT_GAQ_versus_WT_NA_repos |
| Phenotype | greenbergcls.cls#WT_GAQ_versus_WT_NA_repos |
| Upregulated in class | WT_GAQ |
| GeneSet | LIANG_SILENCED_BY_METHYLATION_2 |
| Enrichment Score (ES) | 0.87720525 |
| Normalized Enrichment Score (NES) | 2.0887406 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.0 |
| FWER p-Value | 0.0 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | PTGS2 | prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605] | 3 | 4.907 | 0.0803 | Yes |
| 2 | CCL5 | C-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10632] | 4 | 4.875 | 0.1601 | Yes |
| 3 | SAA1 | serum amyloid A1 [Source:HGNC Symbol;Acc:HGNC:10513] | 17 | 4.706 | 0.2368 | Yes |
| 4 | IFIT1 | interferon induced protein with tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:5407] | 21 | 4.639 | 0.3127 | Yes |
| 5 | IFI44 | interferon induced protein 44 [Source:HGNC Symbol;Acc:HGNC:16938] | 77 | 3.799 | 0.3734 | Yes |
| 6 | IRF7 | interferon regulatory factor 7 [Source:HGNC Symbol;Acc:HGNC:6122] | 85 | 3.724 | 0.4341 | Yes |
| 7 | OAS1 | 2'-5'-oligoadenylate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:8086] | 133 | 3.364 | 0.4879 | Yes |
| 8 | MX1 | MX dynamin like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:7532] | 143 | 3.299 | 0.5417 | Yes |
| 9 | STAT1 | signal transducer and activator of transcription 1 [Source:HGNC Symbol;Acc:HGNC:11362] | 206 | 3.020 | 0.5895 | Yes |
| 10 | TNFAIP3 | TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896] | 231 | 2.880 | 0.6360 | Yes |
| 11 | SOD2 | superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180] | 241 | 2.828 | 0.6820 | Yes |
| 12 | MX2 | MX dynamin like GTPase 2 [Source:HGNC Symbol;Acc:HGNC:7533] | 288 | 2.633 | 0.7239 | Yes |
| 13 | IFIT2 | interferon induced protein with tetratricopeptide repeats 2 [Source:HGNC Symbol;Acc:HGNC:5409] | 397 | 2.367 | 0.7597 | Yes |
| 14 | OAS2 | 2'-5'-oligoadenylate synthetase 2 [Source:HGNC Symbol;Acc:HGNC:8087] | 414 | 2.311 | 0.7971 | Yes |
| 15 | SERPINB2 | serpin family B member 2 [Source:HGNC Symbol;Acc:HGNC:8584] | 580 | 1.960 | 0.8247 | Yes |
| 16 | IL13RA2 | interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975] | 883 | 1.542 | 0.8418 | Yes |
| 17 | CXCL2 | C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603] | 1086 | 1.374 | 0.8589 | Yes |
| 18 | HBEGF | heparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059] | 1193 | 1.295 | 0.8772 | Yes |
| 19 | UCHL1 | ubiquitin C-terminal hydrolase L1 [Source:HGNC Symbol;Acc:HGNC:12513] | 2548 | 0.710 | 0.8523 | No |
| 20 | IFI44L | interferon induced protein 44 like [Source:HGNC Symbol;Acc:HGNC:17817] | 3194 | 0.547 | 0.8438 | No |
| 21 | C3 | complement C3 [Source:HGNC Symbol;Acc:HGNC:1318] | 3931 | 0.401 | 0.8305 | No |
| 22 | IFIT3 | interferon induced protein with tetratricopeptide repeats 3 [Source:HGNC Symbol;Acc:HGNC:5411] | 4881 | 0.250 | 0.8090 | No |
| 23 | IL6 | interleukin 6 [Source:HGNC Symbol;Acc:HGNC:6018] | 4960 | 0.237 | 0.8107 | No |
| 24 | H2AC18 | H2A clustered histone 18 [Source:HGNC Symbol;Acc:HGNC:4736] | 5245 | 0.194 | 0.8063 | No |
| 25 | INHBA | inhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066] | 5307 | 0.185 | 0.8076 | No |
| 26 | CCL20 | C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619] | 6780 | 0.000 | 0.7679 | No |
| 27 | AREG | amphiregulin [Source:HGNC Symbol;Acc:HGNC:651] | 7658 | 0.000 | 0.7442 | No |
| 28 | SLPI | secretory leukocyte peptidase inhibitor [Source:HGNC Symbol;Acc:HGNC:11092] | 9607 | 0.000 | 0.6916 | No |
| 29 | LCN2 | lipocalin 2 [Source:HGNC Symbol;Acc:HGNC:6526] | 11202 | 0.000 | 0.6486 | No |
| 30 | TNFSF10 | TNF superfamily member 10 [Source:HGNC Symbol;Acc:HGNC:11925] | 12675 | 0.000 | 0.6088 | No |
| 31 | BIK | BCL2 interacting killer [Source:HGNC Symbol;Acc:HGNC:1051] | 15686 | 0.000 | 0.5275 | No |
| 32 | H19 | H19 imprinted maternally expressed transcript [Source:HGNC Symbol;Acc:HGNC:4713] | 17182 | 0.000 | 0.4872 | No |
| 33 | ICAM1 | intercellular adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5344] | 18269 | 0.000 | 0.4578 | No |
| 34 | GAGE1 | G antigen 1 [Source:HGNC Symbol;Acc:HGNC:4098] | 18789 | 0.000 | 0.4438 | No |
| 35 | MMP1 | matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155] | 19087 | 0.000 | 0.4358 | No |
| 36 | CXCL6 | C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643] | 19425 | 0.000 | 0.4267 | No |
| 37 | CXCL5 | C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642] | 19440 | 0.000 | 0.4263 | No |
| 38 | DHRS2 | dehydrogenase/reductase 2 [Source:HGNC Symbol;Acc:HGNC:18349] | 19942 | 0.000 | 0.4128 | No |
| 39 | PI3 | peptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:8947] | 19971 | 0.000 | 0.4120 | No |
| 40 | IFI6 | interferon alpha inducible protein 6 [Source:HGNC Symbol;Acc:HGNC:4054] | 20659 | 0.000 | 0.3935 | No |
| 41 | KRT17 | keratin 17 [Source:HGNC Symbol;Acc:HGNC:6427] | 21991 | 0.000 | 0.3575 | No |
| 42 | CTAG1B | cancer/testis antigen 1B [Source:HGNC Symbol;Acc:HGNC:2491] | 22373 | 0.000 | 0.3473 | No |
| 43 | CSF2 | colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434] | 24528 | 0.000 | 0.2891 | No |
| 44 | MAGEA12 | MAGE family member A12 [Source:HGNC Symbol;Acc:HGNC:6799] | 26524 | 0.000 | 0.2352 | No |
| 45 | MAGEA2 | MAGE family member A2 [Source:HGNC Symbol;Acc:HGNC:6800] | 26678 | 0.000 | 0.2311 | No |
| 46 | MAGEA4 | MAGE family member A4 [Source:HGNC Symbol;Acc:HGNC:6802] | 26684 | 0.000 | 0.2310 | No |
| 47 | SSX2 | SSX family member 2 [Source:HGNC Symbol;Acc:HGNC:11336] | 27176 | 0.000 | 0.2177 | No |
| 48 | XAF1 | XIAP associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30932] | 27252 | 0.000 | 0.2157 | No |
| 49 | H2AC6 | H2A clustered histone 6 [Source:HGNC Symbol;Acc:HGNC:4733] | 27562 | -0.016 | 0.2076 | No |
| 50 | THBD | thrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784] | 27809 | -0.047 | 0.2017 | No |
| 51 | STC1 | stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373] | 28490 | -0.129 | 0.1855 | No |
| 52 | SP100 | SP100 nuclear antigen [Source:HGNC Symbol;Acc:HGNC:11206] | 28635 | -0.144 | 0.1840 | No |
| 53 | NT5E | 5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021] | 28659 | -0.146 | 0.1857 | No |
| 54 | MAGEA3 | MAGE family member A3 [Source:HGNC Symbol;Acc:HGNC:6801] | 29116 | -0.202 | 0.1767 | No |
| 55 | C1S | complement C1s [Source:HGNC Symbol;Acc:HGNC:1247] | 30184 | -0.335 | 0.1534 | No |
| 56 | S100A4 | S100 calcium binding protein A4 [Source:HGNC Symbol;Acc:HGNC:10494] | 31262 | -0.494 | 0.1324 | No |
| 57 | STX3 | syntaxin 3 [Source:HGNC Symbol;Acc:HGNC:11438] | 31856 | -0.585 | 0.1260 | No |
| 58 | H2BC6 | H2B clustered histone 6 [Source:HGNC Symbol;Acc:HGNC:4753] | 33354 | -0.936 | 0.1009 | No |
