Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_GAQ_versus_WT_NA.greenbergcls.cls
#WT_GAQ_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetGNF2_CCNA2
Enrichment Score (ES)-0.8523716
Normalized Enrichment Score (NES)-1.7411648
Nominal p-value0.0
FDR q-value4.289026E-4
FWER p-Value0.001
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_CCNA2   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]17571.003-0.0390No
2CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]61350.073-0.1566No
3ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]261680.000-0.6977No
4HJURPHolliday junction recognition protein [Source:HGNC Symbol;Acc:HGNC:25444]29642-0.271-0.7892No
5CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]30362-0.359-0.8056No
6MT1JPmetallothionein 1J, pseudogene [Source:HGNC Symbol;Acc:HGNC:7402]31674-0.559-0.8363No
7AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]31738-0.568-0.8332No
8KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]32450-0.711-0.8464Yes
9HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]32479-0.717-0.8411Yes
10FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]32680-0.764-0.8400Yes
11RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]32901-0.817-0.8391Yes
12TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]33320-0.929-0.8425Yes
13TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]33395-0.948-0.8365Yes
14CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]33639-1.014-0.8345Yes
15GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]33654-1.019-0.8263Yes
16CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]33672-1.025-0.8181Yes
17CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]33831-1.063-0.8134Yes
18ESPL1extra spindle pole bodies like 1, separase [Source:HGNC Symbol;Acc:HGNC:16856]33977-1.108-0.8079Yes
19PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]34110-1.145-0.8018Yes
20MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]34716-1.383-0.8065Yes
21UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]34791-1.414-0.7965Yes
22PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]34837-1.440-0.7856Yes
23RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]34852-1.446-0.7737Yes
24CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]34877-1.459-0.7621Yes
25ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]34892-1.469-0.7500Yes
26PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]35050-1.543-0.7412Yes
27SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]35085-1.562-0.7290Yes
28SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35127-1.583-0.7167Yes
29NCAPGnon-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]35314-1.681-0.7075Yes
30BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]35320-1.686-0.6934Yes
31FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]35401-1.734-0.6809Yes
32SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]35408-1.739-0.6664Yes
33KIF4Akinesin family member 4A [Source:HGNC Symbol;Acc:HGNC:13339]35419-1.743-0.6520Yes
34PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]35494-1.788-0.6389Yes
35DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35520-1.803-0.6243Yes
36BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]35551-1.818-0.6098Yes
37TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35626-1.864-0.5960Yes
38HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]35633-1.871-0.5804Yes
39EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]35653-1.889-0.5649Yes
40KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]35656-1.892-0.5490Yes
41MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]35681-1.914-0.5335Yes
42H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]35698-1.925-0.5177Yes
43CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]35787-1.989-0.5033Yes
44KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]35789-1.990-0.4865Yes
45RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]35922-2.100-0.4723Yes
46PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35994-2.147-0.4561Yes
47RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35995-2.149-0.4379Yes
48TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36013-2.163-0.4201Yes
49MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36036-2.183-0.4023Yes
50MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]36041-2.186-0.3839Yes
51KIF14kinesin family member 14 [Source:HGNC Symbol;Acc:HGNC:19181]36082-2.223-0.3662Yes
52TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]36104-2.244-0.3479Yes
53AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36153-2.285-0.3299Yes
54CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36192-2.319-0.3113Yes
55CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]36214-2.336-0.2921Yes
56RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36276-2.406-0.2735Yes
57NCAPD2non-SMC condensin I complex subunit D2 [Source:HGNC Symbol;Acc:HGNC:24305]36323-2.449-0.2540Yes
58NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36364-2.499-0.2340Yes
59NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36393-2.540-0.2133Yes
60CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36453-2.630-0.1927Yes
61MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36625-2.872-0.1730Yes
62MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36636-2.885-0.1489Yes
63ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36673-2.950-0.1250Yes
64RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36676-2.954-0.1001Yes
65FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36680-2.959-0.0752Yes
66E2F8E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]36808-3.196-0.0516Yes
67MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]36860-3.318-0.0250Yes
68GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]36962-3.6930.0035Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_CCNA2   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_CCNA2: Random ES distribution   
Gene set null distribution of ES for GNF2_CCNA2