Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_GAQ_versus_WT_NA.greenbergcls.cls
#WT_GAQ_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetGNF2_PCNA
Enrichment Score (ES)-0.8287007
Normalized Enrichment Score (NES)-1.6974561
Nominal p-value0.0
FDR q-value0.0019921358
FWER p-Value0.007
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_PCNA   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PA2G4proliferation-associated 2G4 [Source:HGNC Symbol;Acc:HGNC:8550]14011.148-0.0284No
2CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]17571.003-0.0297No
3HNRNPABheterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:HGNC:5034]19780.907-0.0281No
4CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]61350.073-0.1398No
5ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]261680.000-0.6808No
6SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]30480-0.375-0.7942No
7MT1JPmetallothionein 1J, pseudogene [Source:HGNC Symbol;Acc:HGNC:7402]31674-0.559-0.8218No
8AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]31738-0.568-0.8188No
9DNAJC9DnaJ heat shock protein family (Hsp40) member C9 [Source:HGNC Symbol;Acc:HGNC:19123]31752-0.570-0.8144No
10PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]32153-0.642-0.8199No
11HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]32479-0.717-0.8228Yes
12NSD2nuclear receptor binding SET domain protein 2 [Source:HGNC Symbol;Acc:HGNC:12766]32522-0.726-0.8179Yes
13FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]32680-0.764-0.8158Yes
14RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]32901-0.817-0.8150Yes
15TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]33320-0.929-0.8187Yes
16TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]33395-0.948-0.8128Yes
17GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]33654-1.019-0.8114Yes
18CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]33672-1.025-0.8034Yes
19CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]33831-1.063-0.7988Yes
20ESPL1extra spindle pole bodies like 1, separase [Source:HGNC Symbol;Acc:HGNC:16856]33977-1.108-0.7936Yes
21PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]34110-1.145-0.7877Yes
22VRK1VRK serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:12718]34210-1.183-0.7806Yes
23MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]34716-1.383-0.7828Yes
24CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]34877-1.459-0.7751Yes
25PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]35050-1.543-0.7670Yes
26SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]35085-1.562-0.7550Yes
27SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35127-1.583-0.7430Yes
28BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]35320-1.686-0.7343Yes
29FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]35401-1.734-0.7221Yes
30SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]35408-1.739-0.7079Yes
31PAXIP1PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]35465-1.771-0.6948Yes
32PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]35494-1.788-0.6808Yes
33DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35520-1.803-0.6666Yes
34BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]35551-1.818-0.6524Yes
35GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]35614-1.860-0.6387Yes
36TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35626-1.864-0.6236Yes
37HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]35633-1.871-0.6083Yes
38KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]35656-1.892-0.5932Yes
39MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]35681-1.914-0.5781Yes
40H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]35698-1.925-0.5626Yes
41MCM5minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]35722-1.939-0.5472Yes
42CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]35787-1.989-0.5325Yes
43KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]35789-1.990-0.5161Yes
44RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]35922-2.100-0.5023Yes
45PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35994-2.147-0.4865Yes
46RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35995-2.149-0.4687Yes
47POLE2DNA polymerase epsilon 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9178]35999-2.149-0.4510Yes
48TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36013-2.163-0.4335Yes
49MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36036-2.183-0.4161Yes
50MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]36041-2.186-0.3981Yes
51TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]36104-2.244-0.3813Yes
52CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36192-2.319-0.3645Yes
53KIF15kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]36261-2.395-0.3465Yes
54RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36276-2.406-0.3270Yes
55NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36364-2.499-0.3087Yes
56NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36393-2.540-0.2885Yes
57CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36453-2.630-0.2684Yes
58RAD54LRAD54 like [Source:HGNC Symbol;Acc:HGNC:9826]36522-2.718-0.2477Yes
59MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36625-2.872-0.2268Yes
60MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36636-2.885-0.2032Yes
61MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36648-2.896-0.1796Yes
62ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36673-2.950-0.1558Yes
63RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36676-2.954-0.1315Yes
64FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36680-2.959-0.1071Yes
65MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]36860-3.318-0.0846Yes
66DTLdenticleless E3 ubiquitin protein ligase homolog [Source:HGNC Symbol;Acc:HGNC:30288]36930-3.582-0.0568Yes
67GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]36962-3.693-0.0272Yes
68MSH2mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]36967-3.7030.0033Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_PCNA   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_PCNA: Random ES distribution   
Gene set null distribution of ES for GNF2_PCNA