Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_GAQ_versus_WT_NA.greenbergcls.cls
#WT_GAQ_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetBMI1_DN.V1_UP
Enrichment Score (ES)0.45193946
Normalized Enrichment Score (NES)1.2166051
Nominal p-value0.03508772
FDR q-value0.16108821
FWER p-Value0.695
Table: GSEA Results Summary



Fig 1: Enrichment plot: BMI1_DN.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1VEGFCvascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]114.8110.0367Yes
2PMEPA1prostate transmembrane protein, androgen induced 1 [Source:HGNC Symbol;Acc:HGNC:14107]264.5300.0712Yes
3EDN1endothelin 1 [Source:HGNC Symbol;Acc:HGNC:3176]514.0810.1020Yes
4C3AR1complement C3a receptor 1 [Source:HGNC Symbol;Acc:HGNC:1319]623.9940.1324Yes
5ITGA5integrin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6141]733.8240.1616Yes
6FURINfurin, paired basic amino acid cleaving enzyme [Source:HGNC Symbol;Acc:HGNC:8568]1093.5520.1880Yes
7LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]1773.1420.2104Yes
8ABCA1ATP binding cassette subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:29]1793.1380.2345Yes
9ACTA2actin alpha 2, smooth muscle [Source:HGNC Symbol;Acc:HGNC:130]1853.1100.2583Yes
10CHST11carbohydrate sulfotransferase 11 [Source:HGNC Symbol;Acc:HGNC:17422]2542.7440.2776Yes
11CRISPLD2cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]3422.4850.2943Yes
12PIEZO1piezo type mechanosensitive ion channel component 1 [Source:HGNC Symbol;Acc:HGNC:28993]3762.4160.3120Yes
13FZD5frizzled class receptor 5 [Source:HGNC Symbol;Acc:HGNC:4043]3942.3810.3299Yes
14FLNBfilamin B [Source:HGNC Symbol;Acc:HGNC:3755]5342.0310.3418Yes
15SLC1A5solute carrier family 1 member 5 [Source:HGNC Symbol;Acc:HGNC:10943]6071.9080.3545Yes
16NRP2neuropilin 2 [Source:HGNC Symbol;Acc:HGNC:8005]7711.6570.3628Yes
17SLC2A1solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]7791.6460.3753Yes
18TAP1transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]8711.5490.3848Yes
19SLC7A5solute carrier family 7 member 5 [Source:HGNC Symbol;Acc:HGNC:11063]9131.5100.3953Yes
20FAPfibroblast activation protein alpha [Source:HGNC Symbol;Acc:HGNC:3590]9951.4370.4041Yes
21LCP1lymphocyte cytosolic protein 1 [Source:HGNC Symbol;Acc:HGNC:6528]11041.3590.4117Yes
22GPRC5AG protein-coupled receptor class C group 5 member A [Source:HGNC Symbol;Acc:HGNC:9836]11541.3240.4205Yes
23HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]11931.2950.4295Yes
24CSF1colony stimulating factor 1 [Source:HGNC Symbol;Acc:HGNC:2432]14041.1460.4326Yes
25TMEM62transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]16831.0340.4330Yes
26SLC1A4solute carrier family 1 member 4 [Source:HGNC Symbol;Acc:HGNC:10942]17680.9980.4384Yes
27GFPT2glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]18930.9470.4424Yes
28CD82CD82 molecule [Source:HGNC Symbol;Acc:HGNC:6210]20850.8630.4439Yes
29SLC52A2solute carrier family 52 member 2 [Source:HGNC Symbol;Acc:HGNC:30224]22090.8160.4468Yes
30DHRS3dehydrogenase/reductase 3 [Source:HGNC Symbol;Acc:HGNC:17693]23760.7620.4482Yes
31FJX1four-jointed box kinase 1 [Source:HGNC Symbol;Acc:HGNC:17166]24760.7320.4511Yes
32TNFAIP6TNF alpha induced protein 6 [Source:HGNC Symbol;Acc:HGNC:11898]26410.6820.4519Yes
33SLC19A1solute carrier family 19 member 1 [Source:HGNC Symbol;Acc:HGNC:10937]28740.6200.4504No
34AGRNagrin [Source:HGNC Symbol;Acc:HGNC:329]31760.5500.4465No
35B4GALNT1beta-1,4-N-acetyl-galactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:4117]35670.4670.4396No
36TAGLNtransgelin [Source:HGNC Symbol;Acc:HGNC:11553]36350.4530.4412No
37FKRPfukutin related protein [Source:HGNC Symbol;Acc:HGNC:17997]36820.4460.4434No
38PODXLpodocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]36850.4460.4468No
39TGFB2transforming growth factor beta 2 [Source:HGNC Symbol;Acc:HGNC:11768]43470.3310.4315No
40FGFR1fibroblast growth factor receptor 1 [Source:HGNC Symbol;Acc:HGNC:3688]45660.2990.4279No
41TNFRSF8TNF receptor superfamily member 8 [Source:HGNC Symbol;Acc:HGNC:11923]45730.2980.4300No
42F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]48440.2550.4246No
43CSPG5chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]50720.2200.4202No
44TLCD3ATLC domain containing 3A [Source:HGNC Symbol;Acc:HGNC:29646]51140.2140.4207No
45INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]53070.1850.4170No
46ASPHaspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]56600.1330.4085No
47LRIG1leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]58670.1040.4037No
48ATF6activating transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:791]62260.0610.3945No
49LAMB3laminin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6490]62730.0550.3936No
50CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]67800.0000.3799No
51FGF21fibroblast growth factor 21 [Source:HGNC Symbol;Acc:HGNC:3678]72690.0000.3667No
52VANGL1VANGL planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:15512]83680.0000.3370No
53GREM1gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001]85730.0000.3315No
54PROP1PROP paired-like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9455]86660.0000.3290No
55HOXB1homeobox B1 [Source:HGNC Symbol;Acc:HGNC:5111]91410.0000.3162No
56TNFSF9TNF superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11939]91750.0000.3153No
57VLDLRvery low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:12698]98560.0000.2969No
58TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]101080.0000.2901No
59PLATplasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]102230.0000.2870No
60ADAM12ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]102360.0000.2867No
61ACKR3atypical chemokine receptor 3 [Source:HGNC Symbol;Acc:HGNC:23692]113630.0000.2562No
62LRRC15leucine rich repeat containing 15 [Source:HGNC Symbol;Acc:HGNC:20818]116660.0000.2480No
63PTHLHparathyroid hormone like hormone [Source:HGNC Symbol;Acc:HGNC:9607]118950.0000.2418No
64PSG5pregnancy specific beta-1-glycoprotein 5 [Source:HGNC Symbol;Acc:HGNC:9522]120970.0000.2364No
65IGKCimmunoglobulin kappa constant [Source:HGNC Symbol;Acc:HGNC:5716]127400.0000.2190No
66VNN1vanin 1 [Source:HGNC Symbol;Acc:HGNC:12705]129720.0000.2128No
67TIE1tyrosine kinase with immunoglobulin like and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:11809]132820.0000.2044No
68COL13A1collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]156630.0000.1400No
69DKK1dickkopf WNT signaling pathway inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:2891]164480.0000.1188No
70COL16A1collagen type XVI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2193]165600.0000.1158No
71GALgalanin and GMAP prepropeptide [Source:HGNC Symbol;Acc:HGNC:4114]169580.0000.1050No
72TIMP3TIMP metallopeptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:11822]171900.0000.0988No
73CDCP1CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]173260.0000.0951No
74GABREgamma-aminobutyric acid type A receptor subunit epsilon [Source:HGNC Symbol;Acc:HGNC:4085]173460.0000.0946No
75HAPLN1hyaluronan and proteoglycan link protein 1 [Source:HGNC Symbol;Acc:HGNC:2380]174530.0000.0917No
76SRPX2sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]175520.0000.0891No
77MICAMHC class I polypeptide-related sequence A [Source:HGNC Symbol;Acc:HGNC:7090]177100.0000.0848No
78MICBMHC class I polypeptide-related sequence B [Source:HGNC Symbol;Acc:HGNC:7091]177110.0000.0848No
79SEMA3Gsemaphorin 3G [Source:HGNC Symbol;Acc:HGNC:30400]178830.0000.0802No
80PAPPApappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]178940.0000.0799No
81BDKRB2bradykinin receptor B2 [Source:HGNC Symbol;Acc:HGNC:1030]179790.0000.0776No
82BMP5bone morphogenetic protein 5 [Source:HGNC Symbol;Acc:HGNC:1072]190590.0000.0484No
83BMP4bone morphogenetic protein 4 [Source:HGNC Symbol;Acc:HGNC:1071]190610.0000.0484No
84MMP7matrix metallopeptidase 7 [Source:HGNC Symbol;Acc:HGNC:7174]190840.0000.0478No
85MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]190910.0000.0477No
86CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]194380.0000.0383No
87TCIMtranscriptional and immune response regulator [Source:HGNC Symbol;Acc:HGNC:1357]198230.0000.0279No
88MMP15matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]208580.000-0.0001No
89KRT17keratin 17 [Source:HGNC Symbol;Acc:HGNC:6427]219910.000-0.0307No
90CCN3cellular communication network factor 3 [Source:HGNC Symbol;Acc:HGNC:7885]229530.000-0.0567No
91FOXP3forkhead box P3 [Source:HGNC Symbol;Acc:HGNC:6106]235060.000-0.0717No
92CPA4carboxypeptidase A4 [Source:HGNC Symbol;Acc:HGNC:15740]235300.000-0.0723No
93CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]245280.000-0.0993No
94LSAMPlimbic system associated membrane protein [Source:HGNC Symbol;Acc:HGNC:6705]247420.000-0.1051No
95CLDN1claudin 1 [Source:HGNC Symbol;Acc:HGNC:2032]248680.000-0.1084No
96HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]249330.000-0.1102No
97MFAP5microfibril associated protein 5 [Source:HGNC Symbol;Acc:HGNC:29673]255080.000-0.1257No
98PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]255920.000-0.1280No
99ITGB8integrin subunit beta 8 [Source:HGNC Symbol;Acc:HGNC:6163]264280.000-0.1506No
100ITGB6integrin subunit beta 6 [Source:HGNC Symbol;Acc:HGNC:6161]264310.000-0.1506No
101ITGA3integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]264340.000-0.1507No
102SLCO2A1solute carrier organic anion transporter family member 2A1 [Source:HGNC Symbol;Acc:HGNC:10955]266080.000-0.1553No
103SLC5A6solute carrier family 5 member 6 [Source:HGNC Symbol;Acc:HGNC:11041]27571-0.018-0.1813No
104IL7Rinterleukin 7 receptor [Source:HGNC Symbol;Acc:HGNC:6024]27760-0.040-0.1860No
105STX1Asyntaxin 1A [Source:HGNC Symbol;Acc:HGNC:11433]28050-0.073-0.1933No
106STC2stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]28211-0.096-0.1969No
107GDF5growth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]28219-0.098-0.1963No
108CSPG4chondroitin sulfate proteoglycan 4 [Source:HGNC Symbol;Acc:HGNC:2466]28502-0.130-0.2030No
109NT5E5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021]28659-0.146-0.2061No
110TEKTEK receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11724]28904-0.178-0.2113No
111ANPEPalanyl aminopeptidase, membrane [Source:HGNC Symbol;Acc:HGNC:500]28999-0.189-0.2124No
112BST1bone marrow stromal cell antigen 1 [Source:HGNC Symbol;Acc:HGNC:1118]30522-0.382-0.2506No
113ANXA3annexin A3 [Source:HGNC Symbol;Acc:HGNC:541]30787-0.421-0.2545No
114ADGRE5adhesion G protein-coupled receptor E5 [Source:HGNC Symbol;Acc:HGNC:1711]30976-0.450-0.2562No
115MFGE8milk fat globule EGF and factor V/VIII domain containing [Source:HGNC Symbol;Acc:HGNC:7036]31127-0.470-0.2566No
116KMT2Alysine methyltransferase 2A [Source:HGNC Symbol;Acc:HGNC:7132]31178-0.479-0.2543No
117SLC2A6solute carrier family 2 member 6 [Source:HGNC Symbol;Acc:HGNC:11011]31222-0.487-0.2517No
118INHBEinhibin subunit beta E [Source:HGNC Symbol;Acc:HGNC:24029]31419-0.516-0.2530No
119EPHA2EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]31660-0.558-0.2552No
120FESFES proto-oncogene, tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3657]32268-0.669-0.2665No
121COL7A1collagen type VII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2214]32373-0.692-0.2640No
122CCND1cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]32413-0.702-0.2597No
123POMT2protein O-mannosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:19743]32613-0.749-0.2593No
124SLC29A2solute carrier family 29 member 2 [Source:HGNC Symbol;Acc:HGNC:11004]32827-0.800-0.2589No
125CTSScathepsin S [Source:HGNC Symbol;Acc:HGNC:2545]33106-0.868-0.2597No
126TRIOtrio Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:12303]33240-0.905-0.2564No
127LHFPL2LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]33961-1.101-0.2674No
128CTNScystinosin, lysosomal cystine transporter [Source:HGNC Symbol;Acc:HGNC:2518]34489-1.289-0.2717No
129FADS3fatty acid desaturase 3 [Source:HGNC Symbol;Acc:HGNC:3576]34780-1.410-0.2687No
130C2CD2LC2CD2 like [Source:HGNC Symbol;Acc:HGNC:29000]35106-1.572-0.2654No
131PANX1pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]35151-1.601-0.2543No
132KCNC4potassium voltage-gated channel subfamily C member 4 [Source:HGNC Symbol;Acc:HGNC:6236]35499-1.790-0.2499No
133JAG1jagged canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:6188]35522-1.803-0.2366No
134SIRPAsignal regulatory protein alpha [Source:HGNC Symbol;Acc:HGNC:9662]35689-1.919-0.2264No
135LRP5LDL receptor related protein 5 [Source:HGNC Symbol;Acc:HGNC:6697]35739-1.953-0.2126No
136TMEM51transmembrane protein 51 [Source:HGNC Symbol;Acc:HGNC:25488]35805-2.003-0.1990No
137LTBP4latent transforming growth factor beta binding protein 4 [Source:HGNC Symbol;Acc:HGNC:6717]36204-2.331-0.1918No
138P3H3prolyl 3-hydroxylase 3 [Source:HGNC Symbol;Acc:HGNC:19318]36251-2.380-0.1748No
139SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]36259-2.394-0.1565No
140CHST3carbohydrate sulfotransferase 3 [Source:HGNC Symbol;Acc:HGNC:1971]36633-2.879-0.1445No
141PLXNA2plexin A2 [Source:HGNC Symbol;Acc:HGNC:9100]36634-2.879-0.1223No
142SLC29A1solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]36645-2.892-0.1003No
143CLSPNclaspin [Source:HGNC Symbol;Acc:HGNC:19715]36783-3.156-0.0797No
144ATP13A2ATPase cation transporting 13A2 [Source:HGNC Symbol;Acc:HGNC:30213]36872-3.361-0.0563No
145ITGA4integrin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6140]37002-3.881-0.0299No
146ADRB2adrenoceptor beta 2 [Source:HGNC Symbol;Acc:HGNC:286]37048-4.1880.0011No
Table: GSEA details [plain text format]



Fig 2: BMI1_DN.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: BMI1_DN.V1_UP: Random ES distribution   
Gene set null distribution of ES for BMI1_DN.V1_UP