Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_GAQ_versus_WT_NA.greenbergcls.cls
#WT_GAQ_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetBMI1_DN_MEL18_DN.V1_UP
Enrichment Score (ES)0.5490977
Normalized Enrichment Score (NES)1.4657816
Nominal p-value0.0
FDR q-value0.04863157
FWER p-Value0.125
Table: GSEA Results Summary



Fig 1: Enrichment plot: BMI1_DN_MEL18_DN.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1Ainterleukin 1 alpha [Source:HGNC Symbol;Acc:HGNC:5991]24.9200.0344Yes
2VEGFCvascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]114.8110.0679Yes
3FOSL1FOS like 1, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:13718]204.6800.1005Yes
4PMEPA1prostate transmembrane protein, androgen induced 1 [Source:HGNC Symbol;Acc:HGNC:14107]264.5300.1320Yes
5EDN1endothelin 1 [Source:HGNC Symbol;Acc:HGNC:3176]514.0810.1600Yes
6SLC7A11solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]604.0140.1879Yes
7C3AR1complement C3a receptor 1 [Source:HGNC Symbol;Acc:HGNC:1319]623.9940.2158Yes
8ZC3H12Azinc finger CCCH-type containing 12A [Source:HGNC Symbol;Acc:HGNC:26259]643.9800.2437Yes
9ITGA5integrin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6141]733.8240.2703Yes
10GADD45Agrowth arrest and DNA damage inducible alpha [Source:HGNC Symbol;Acc:HGNC:4095]913.6600.2954Yes
11PIM1Pim-1 proto-oncogene, serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:8986]1443.2970.3171Yes
12LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]1773.1420.3383Yes
13ABCA1ATP binding cassette subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:29]1793.1380.3602Yes
14EHD1EH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:3242]1953.0690.3813Yes
15CHST11carbohydrate sulfotransferase 11 [Source:HGNC Symbol;Acc:HGNC:17422]2542.7440.3989Yes
16CRISPLD2cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]3422.4850.4140Yes
17PIEZO1piezo type mechanosensitive ion channel component 1 [Source:HGNC Symbol;Acc:HGNC:28993]3762.4160.4300Yes
18ATF3activating transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:785]4962.1020.4415Yes
19TNIP3TNFAIP3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:19315]5601.9850.4537Yes
20NRP2neuropilin 2 [Source:HGNC Symbol;Acc:HGNC:8005]7711.6570.4597Yes
21RUSC2RUN and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23625]7981.6310.4704Yes
22CDC42EP2CDC42 effector protein 2 [Source:HGNC Symbol;Acc:HGNC:16263]8281.5910.4807Yes
23SLC7A5solute carrier family 7 member 5 [Source:HGNC Symbol;Acc:HGNC:11063]9131.5100.4890Yes
24FAPfibroblast activation protein alpha [Source:HGNC Symbol;Acc:HGNC:3590]9951.4370.4969Yes
25LCP1lymphocyte cytosolic protein 1 [Source:HGNC Symbol;Acc:HGNC:6528]11041.3590.5035Yes
26HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]11931.2950.5102Yes
27KCNN4potassium calcium-activated channel subfamily N member 4 [Source:HGNC Symbol;Acc:HGNC:6293]12931.2190.5161Yes
28CSF1colony stimulating factor 1 [Source:HGNC Symbol;Acc:HGNC:2432]14041.1460.5211Yes
29APBB2amyloid beta precursor protein binding family B member 2 [Source:HGNC Symbol;Acc:HGNC:582]17311.0110.5194Yes
30SLC1A4solute carrier family 1 member 4 [Source:HGNC Symbol;Acc:HGNC:10942]17680.9980.5254Yes
31NKAIN1sodium/potassium transporting ATPase interacting 1 [Source:HGNC Symbol;Acc:HGNC:25743]18870.9490.5288Yes
32GFPT2glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]18930.9470.5353Yes
33TRIB3tribbles pseudokinase 3 [Source:HGNC Symbol;Acc:HGNC:16228]19810.9070.5393Yes
34TFECtranscription factor EC [Source:HGNC Symbol;Acc:HGNC:11754]19830.9060.5456Yes
35DUSP10dual specificity phosphatase 10 [Source:HGNC Symbol;Acc:HGNC:3065]23970.7530.5397Yes
36ZEB2zinc finger E-box binding homeobox 2 [Source:HGNC Symbol;Acc:HGNC:14881]24000.7520.5450Yes
37FJX1four-jointed box kinase 1 [Source:HGNC Symbol;Acc:HGNC:17166]24760.7320.5481Yes
38TNFAIP6TNF alpha induced protein 6 [Source:HGNC Symbol;Acc:HGNC:11898]26410.6820.5484Yes
39SLC19A1solute carrier family 19 member 1 [Source:HGNC Symbol;Acc:HGNC:10937]28740.6200.5465Yes
40KLF7Kruppel like factor 7 [Source:HGNC Symbol;Acc:HGNC:6350]31650.5520.5425Yes
41MICALL1MICAL like 1 [Source:HGNC Symbol;Acc:HGNC:29804]31740.5510.5461Yes
42TUFT1tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]33200.5180.5458Yes
43RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]34590.4870.5455Yes
44C2CD2C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]35230.4760.5471Yes
45TAGLNtransgelin [Source:HGNC Symbol;Acc:HGNC:11553]36350.4530.5473Yes
46PODXLpodocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]36850.4460.5491Yes
47MT1Fmetallothionein 1F [Source:HGNC Symbol;Acc:HGNC:7398]40050.3880.5432No
48TGFB2transforming growth factor beta 2 [Source:HGNC Symbol;Acc:HGNC:11768]43470.3310.5363No
49ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]43720.3280.5379No
50TNFRSF8TNF receptor superfamily member 8 [Source:HGNC Symbol;Acc:HGNC:11923]45730.2980.5346No
51PIK3CGphosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma [Source:HGNC Symbol;Acc:HGNC:8978]46680.2850.5340No
52F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]48440.2550.5311No
53MAP3K7CLMAP3K7 C-terminal like [Source:HGNC Symbol;Acc:HGNC:16457]50450.2240.5272No
54INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]53070.1850.5215No
55ARL4AADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]53550.1770.5214No
56KRT75keratin 75 [Source:HGNC Symbol;Acc:HGNC:24431]54390.1630.5203No
57SLC22A4solute carrier family 22 member 4 [Source:HGNC Symbol;Acc:HGNC:10968]56380.1360.5159No
58ASPHaspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]56600.1330.5163No
59ARNTL2aryl hydrocarbon receptor nuclear translocator like 2 [Source:HGNC Symbol;Acc:HGNC:18984]57770.1180.5140No
60BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]61740.0680.5037No
61LAMB3laminin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6490]62730.0550.5015No
62GAB2GRB2 associated binding protein 2 [Source:HGNC Symbol;Acc:HGNC:14458]63450.0470.4999No
63FGF21fibroblast growth factor 21 [Source:HGNC Symbol;Acc:HGNC:3678]72690.0000.4749No
64ABLIM3actin binding LIM protein family member 3 [Source:HGNC Symbol;Acc:HGNC:29132]74090.0000.4711No
65GREM1gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001]85730.0000.4396No
66TNFSF9TNF superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11939]91750.0000.4234No
67VLDLRvery low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:12698]98560.0000.4050No
68TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]101080.0000.3982No
69PLATplasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]102230.0000.3951No
70ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]102340.0000.3948No
71ADAM12ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]102360.0000.3948No
72ADM2adrenomedullin 2 [Source:HGNC Symbol;Acc:HGNC:28898]114080.0000.3631No
73LRRC15leucine rich repeat containing 15 [Source:HGNC Symbol;Acc:HGNC:20818]116660.0000.3562No
74PTHLHparathyroid hormone like hormone [Source:HGNC Symbol;Acc:HGNC:9607]118950.0000.3500No
75VNN1vanin 1 [Source:HGNC Symbol;Acc:HGNC:12705]129720.0000.3209No
76TACR3tachykinin receptor 3 [Source:HGNC Symbol;Acc:HGNC:11528]134210.0000.3087No
77COL13A1collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]156630.0000.2481No
78HTR1D5-hydroxytryptamine receptor 1D [Source:HGNC Symbol;Acc:HGNC:5289]157190.0000.2466No
79COL16A1collagen type XVI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2193]165600.0000.2239No
80GALgalanin and GMAP prepropeptide [Source:HGNC Symbol;Acc:HGNC:4114]169580.0000.2131No
81TIMP3TIMP metallopeptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:11822]171900.0000.2069No
82MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]172020.0000.2066No
83FAM189A1family with sequence similarity 189 member A1 [Source:HGNC Symbol;Acc:HGNC:29075]173590.0000.2023No
84HAPLN1hyaluronan and proteoglycan link protein 1 [Source:HGNC Symbol;Acc:HGNC:2380]174530.0000.1998No
85MICAMHC class I polypeptide-related sequence A [Source:HGNC Symbol;Acc:HGNC:7090]177100.0000.1929No
86PAPPApappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]178940.0000.1879No
87CDH13cadherin 13 [Source:HGNC Symbol;Acc:HGNC:1753]187220.0000.1656No
88BMP5bone morphogenetic protein 5 [Source:HGNC Symbol;Acc:HGNC:1072]190590.0000.1565No
89MMP7matrix metallopeptidase 7 [Source:HGNC Symbol;Acc:HGNC:7174]190840.0000.1558No
90CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]194290.0000.1465No
91CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]194380.0000.1463No
92TCIMtranscriptional and immune response regulator [Source:HGNC Symbol;Acc:HGNC:1357]198230.0000.1359No
93SCML2Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]202750.0000.1237No
94CPA4carboxypeptidase A4 [Source:HGNC Symbol;Acc:HGNC:15740]235300.0000.0356No
95NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]237020.0000.0310No
96CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]245280.0000.0087No
97LSAMPlimbic system associated membrane protein [Source:HGNC Symbol;Acc:HGNC:6705]247420.0000.0029No
98WNT5BWnt family member 5B [Source:HGNC Symbol;Acc:HGNC:16265]247630.0000.0023No
99CLDN1claudin 1 [Source:HGNC Symbol;Acc:HGNC:2032]248680.000-0.0005No
100HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]249330.000-0.0022No
101PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]255920.000-0.0200No
102PLAURplasminogen activator, urokinase receptor [Source:HGNC Symbol;Acc:HGNC:9053]256860.000-0.0225No
103ITGB8integrin subunit beta 8 [Source:HGNC Symbol;Acc:HGNC:6163]264280.000-0.0426No
104ITGB6integrin subunit beta 6 [Source:HGNC Symbol;Acc:HGNC:6161]264310.000-0.0426No
105ITGA3integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]264340.000-0.0427No
106PAGE1PAGE family member 1 [Source:HGNC Symbol;Acc:HGNC:4107]265230.000-0.0451No
107SIK1salt inducible kinase 1 [Source:HGNC Symbol;Acc:HGNC:11142]27691-0.033-0.0764No
108IL7Rinterleukin 7 receptor [Source:HGNC Symbol;Acc:HGNC:6024]27760-0.040-0.0780No
109STX1Asyntaxin 1A [Source:HGNC Symbol;Acc:HGNC:11433]28050-0.073-0.0853No
110STC2stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]28211-0.096-0.0890No
111GDF5growth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]28219-0.098-0.0885No
112CSPG4chondroitin sulfate proteoglycan 4 [Source:HGNC Symbol;Acc:HGNC:2466]28502-0.130-0.0952No
113NT5E5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021]28659-0.146-0.0984No
114VEGFAvascular endothelial growth factor A [Source:HGNC Symbol;Acc:HGNC:12680]28797-0.162-0.1010No
115TEKTEK receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11724]28904-0.178-0.1026No
116KCNN3potassium calcium-activated channel subfamily N member 3 [Source:HGNC Symbol;Acc:HGNC:6292]29927-0.302-0.1281No
117PSAT1phosphoserine aminotransferase 1 [Source:HGNC Symbol;Acc:HGNC:19129]30434-0.369-0.1392No
118BST1bone marrow stromal cell antigen 1 [Source:HGNC Symbol;Acc:HGNC:1118]30522-0.382-0.1389No
119ANXA3annexin A3 [Source:HGNC Symbol;Acc:HGNC:541]30787-0.421-0.1431No
120ADGRE5adhesion G protein-coupled receptor E5 [Source:HGNC Symbol;Acc:HGNC:1711]30976-0.450-0.1450No
121KMT2Alysine methyltransferase 2A [Source:HGNC Symbol;Acc:HGNC:7132]31178-0.479-0.1471No
122INHBEinhibin subunit beta E [Source:HGNC Symbol;Acc:HGNC:24029]31419-0.516-0.1500No
123ADGBandroglobin [Source:HGNC Symbol;Acc:HGNC:21212]32336-0.686-0.1700No
124COL7A1collagen type VII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2214]32373-0.692-0.1661No
125CCND1cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]32413-0.702-0.1623No
126P2RX5purinergic receptor P2X 5 [Source:HGNC Symbol;Acc:HGNC:8536]32573-0.737-0.1614No
127SLC6A9solute carrier family 6 member 9 [Source:HGNC Symbol;Acc:HGNC:11056]33228-0.901-0.1728No
128TRIOtrio Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:12303]33240-0.905-0.1668No
129LHFPL2LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]33961-1.101-0.1785No
130FADS3fatty acid desaturase 3 [Source:HGNC Symbol;Acc:HGNC:3576]34780-1.410-0.1908No
131ARL4CADP ribosylation factor like GTPase 4C [Source:HGNC Symbol;Acc:HGNC:698]34840-1.441-0.1823No
132KIF21Bkinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]34959-1.495-0.1750No
133C2CD2LC2CD2 like [Source:HGNC Symbol;Acc:HGNC:29000]35106-1.572-0.1680No
134JAG1jagged canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:6188]35522-1.803-0.1666No
135ADMadrenomedullin [Source:HGNC Symbol;Acc:HGNC:259]35585-1.837-0.1554No
136TMEM51transmembrane protein 51 [Source:HGNC Symbol;Acc:HGNC:25488]35805-2.003-0.1473No
137OGFRL1opioid growth factor receptor like 1 [Source:HGNC Symbol;Acc:HGNC:21378]36492-2.672-0.1471No
138NAV2neuron navigator 2 [Source:HGNC Symbol;Acc:HGNC:15997]36545-2.744-0.1293No
139CHST3carbohydrate sulfotransferase 3 [Source:HGNC Symbol;Acc:HGNC:1971]36633-2.879-0.1115No
140PLEKHO1pleckstrin homology domain containing O1 [Source:HGNC Symbol;Acc:HGNC:24310]36660-2.925-0.0917No
141WEE1WEE1 G2 checkpoint kinase [Source:HGNC Symbol;Acc:HGNC:12761]36855-3.309-0.0738No
142ATP13A2ATPase cation transporting 13A2 [Source:HGNC Symbol;Acc:HGNC:30213]36872-3.361-0.0507No
143ITGA4integrin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6140]37002-3.881-0.0270No
144ADRB2adrenoceptor beta 2 [Source:HGNC Symbol;Acc:HGNC:286]37048-4.1880.0011No
Table: GSEA details [plain text format]



Fig 2: BMI1_DN_MEL18_DN.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: BMI1_DN_MEL18_DN.V1_UP: Random ES distribution   
Gene set null distribution of ES for BMI1_DN_MEL18_DN.V1_UP