Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #WT_GAQ_versus_WT_NA.greenbergcls.cls #WT_GAQ_versus_WT_NA_repos |
| Phenotype | greenbergcls.cls#WT_GAQ_versus_WT_NA_repos |
| Upregulated in class | WT_GAQ |
| GeneSet | HINATA_NFKB_IMMU_INF |
| Enrichment Score (ES) | 0.8969079 |
| Normalized Enrichment Score (NES) | 1.5961819 |
| Nominal p-value | 0.006289308 |
| FDR q-value | 0.07333531 |
| FWER p-Value | 0.03 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | IL1B | interleukin 1 beta [Source:HGNC Symbol;Acc:HGNC:5992] | 0 | 4.925 | 0.2468 | Yes |
| 2 | NFKB1 | nuclear factor kappa B subunit 1 [Source:HGNC Symbol;Acc:HGNC:7794] | 102 | 3.599 | 0.4243 | Yes |
| 3 | NFKBIA | NFKB inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:7797] | 107 | 3.570 | 0.6031 | Yes |
| 4 | CD83 | CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703] | 145 | 3.295 | 0.7672 | Yes |
| 5 | TNFAIP2 | TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895] | 720 | 1.721 | 0.8379 | Yes |
| 6 | CXCL2 | C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603] | 1086 | 1.374 | 0.8969 | Yes |
| 7 | RELA | RELA proto-oncogene, NF-kB subunit [Source:HGNC Symbol;Acc:HGNC:9955] | 3899 | 0.407 | 0.8414 | No |
| 8 | CXCL3 | C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604] | 4525 | 0.304 | 0.8398 | No |
| 9 | IL6 | interleukin 6 [Source:HGNC Symbol;Acc:HGNC:6018] | 4960 | 0.237 | 0.8400 | No |
| 10 | PTX3 | pentraxin 3 [Source:HGNC Symbol;Acc:HGNC:9692] | 12578 | 0.000 | 0.6345 | No |
| 11 | OLR1 | oxidized low density lipoprotein receptor 1 [Source:HGNC Symbol;Acc:HGNC:8133] | 16808 | 0.000 | 0.5205 | No |
| 12 | ICAM1 | intercellular adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5344] | 18269 | 0.000 | 0.4811 | No |
| 13 | CXCL6 | C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643] | 19425 | 0.000 | 0.4499 | No |
| 14 | CXCL8 | C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025] | 19429 | 0.000 | 0.4499 | No |
| 15 | IRF1 | interferon regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:6116] | 31490 | -0.528 | 0.1510 | No |
