Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_GAQ_versus_WT_NA.greenbergcls.cls
#WT_GAQ_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetKRAS.KIDNEY_UP.V1_DN
Enrichment Score (ES)0.48891357
Normalized Enrichment Score (NES)1.2912378
Nominal p-value0.016393442
FDR q-value0.12114537
FWER p-Value0.469
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.KIDNEY_UP.V1_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PTGER2prostaglandin E receptor 2 [Source:HGNC Symbol;Acc:HGNC:9594]184.6990.0656Yes
2ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]1053.5850.1137Yes
3OAS12'-5'-oligoadenylate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:8086]1333.3640.1603Yes
4MX1MX dynamin like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:7532]1433.2990.2065Yes
5RSAD2radical S-adenosyl methionine domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30908]2202.9340.2457Yes
6PDCD1programmed cell death 1 [Source:HGNC Symbol;Acc:HGNC:8760]2402.8290.2849Yes
7MX2MX dynamin like GTPase 2 [Source:HGNC Symbol;Acc:HGNC:7533]2882.6330.3207Yes
8CD14CD14 molecule [Source:HGNC Symbol;Acc:HGNC:1628]2962.6080.3572Yes
9ACTC1actin alpha cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]3202.5410.3923Yes
10STX11syntaxin 11 [Source:HGNC Symbol;Acc:HGNC:11429]3562.4640.4260Yes
11SRCSRC proto-oncogene, non-receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11283]7701.6580.4381Yes
12EFHD1EF-hand domain family member D1 [Source:HGNC Symbol;Acc:HGNC:29556]8791.5430.4569Yes
13NESnestin [Source:HGNC Symbol;Acc:HGNC:7756]12301.2650.4652Yes
14KCND1potassium voltage-gated channel subfamily D member 1 [Source:HGNC Symbol;Acc:HGNC:6237]12461.2560.4825Yes
15CXCL10C-X-C motif chemokine ligand 10 [Source:HGNC Symbol;Acc:HGNC:10637]15711.0780.4889Yes
16HINFPhistone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]26130.6920.4705No
17DDX51DEAD-box helicase 51 [Source:HGNC Symbol;Acc:HGNC:20082]28450.6250.4730No
18CARD9caspase recruitment domain family member 9 [Source:HGNC Symbol;Acc:HGNC:16391]31690.5520.4720No
19IFI44Linterferon induced protein 44 like [Source:HGNC Symbol;Acc:HGNC:17817]31940.5470.4791No
20LIPElipase E, hormone sensitive type [Source:HGNC Symbol;Acc:HGNC:6621]32130.5410.4862No
21KCNN1potassium calcium-activated channel subfamily N member 1 [Source:HGNC Symbol;Acc:HGNC:6290]36620.4490.4804No
22APBB3amyloid beta precursor protein binding family B member 3 [Source:HGNC Symbol;Acc:HGNC:20708]41910.3570.4711No
23IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]48680.2520.4564No
24IL6interleukin 6 [Source:HGNC Symbol;Acc:HGNC:6018]49600.2370.4573No
25GRM8glutamate metabotropic receptor 8 [Source:HGNC Symbol;Acc:HGNC:4600]55500.1470.4434No
26CBLCbl proto-oncogene [Source:HGNC Symbol;Acc:HGNC:1541]56840.1300.4416No
27RBISribosomal biogenesis factor [Source:HGNC Symbol;Acc:HGNC:32235]57660.1200.4411No
28ABCB11ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]63780.0420.4252No
29CBARPCACN subunit beta associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28617]66380.0090.4183No
30CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]67800.0000.4145No
31CCL27C-C motif chemokine ligand 27 [Source:HGNC Symbol;Acc:HGNC:10626]67970.0000.4140No
32IL1RL2interleukin 1 receptor like 2 [Source:HGNC Symbol;Acc:HGNC:5999]72840.0000.4009No
33EPHA5EPH receptor A5 [Source:HGNC Symbol;Acc:HGNC:3389]77940.0000.3871No
34ASPNasporin [Source:HGNC Symbol;Acc:HGNC:14872]81230.0000.3782No
35SGK2serum/glucocorticoid regulated kinase 2 [Source:HGNC Symbol;Acc:HGNC:13900]82200.0000.3756No
36OR7A10olfactory receptor family 7 subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:8356]84320.0000.3699No
37PROP1PROP paired-like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9455]86660.0000.3636No
38SIM1SIM bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10882]87140.0000.3623No
39FOLR2folate receptor beta [Source:HGNC Symbol;Acc:HGNC:3793]98210.0000.3324No
40SERHL2serine hydrolase like 2 [Source:HGNC Symbol;Acc:HGNC:29446]99020.0000.3303No
41KCNF1potassium voltage-gated channel modifier subfamily F member 1 [Source:HGNC Symbol;Acc:HGNC:6246]101030.0000.3248No
42CETPcholesteryl ester transfer protein [Source:HGNC Symbol;Acc:HGNC:1869]101710.0000.3230No
43GRM4glutamate metabotropic receptor 4 [Source:HGNC Symbol;Acc:HGNC:4596]102690.0000.3204No
44AADACarylacetamide deacetylase [Source:HGNC Symbol;Acc:HGNC:17]106630.0000.3098No
45LRRC31leucine rich repeat containing 31 [Source:HGNC Symbol;Acc:HGNC:26261]116550.0000.2830No
46IFI30IFI30 lysosomal thiol reductase [Source:HGNC Symbol;Acc:HGNC:5398]117540.0000.2803No
47EREGepiregulin [Source:HGNC Symbol;Acc:HGNC:3443]117610.0000.2801No
48PRG2proteoglycan 2, pro eosinophil major basic protein [Source:HGNC Symbol;Acc:HGNC:9362]117790.0000.2797No
49LMAN1Llectin, mannose binding 1 like [Source:HGNC Symbol;Acc:HGNC:6632]120850.0000.2714No
50SLC6A20solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]121080.0000.2708No
51RYR2ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]121320.0000.2702No
52CNN1calponin 1 [Source:HGNC Symbol;Acc:HGNC:2155]125140.0000.2599No
53ADAMTSL2ADAMTS like 2 [Source:HGNC Symbol;Acc:HGNC:14631]128620.0000.2505No
54TENM2teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]129810.0000.2473No
55THRBthyroid hormone receptor beta [Source:HGNC Symbol;Acc:HGNC:11799]130360.0000.2459No
56TACR2tachykinin receptor 2 [Source:HGNC Symbol;Acc:HGNC:11527]134200.0000.2355No
57LILRA4leukocyte immunoglobulin like receptor A4 [Source:HGNC Symbol;Acc:HGNC:15503]136430.0000.2295No
58LILRB4leukocyte immunoglobulin like receptor B4 [Source:HGNC Symbol;Acc:HGNC:6608]136500.0000.2293No
59GATA4GATA binding protein 4 [Source:HGNC Symbol;Acc:HGNC:4173]137360.0000.2270No
60IL26interleukin 26 [Source:HGNC Symbol;Acc:HGNC:17119]139700.0000.2207No
61TMEM262transmembrane protein 262 [Source:HGNC Symbol;Acc:HGNC:49389]140500.0000.2186No
62KRT2keratin 2 [Source:HGNC Symbol;Acc:HGNC:6439]143540.0000.2104No
63B3GALT5beta-1,3-galactosyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:920]146670.0000.2019No
64NPC1L1NPC1 like intracellular cholesterol transporter 1 [Source:HGNC Symbol;Acc:HGNC:7898]161000.0000.1632No
65C3orf36chromosome 3 putative open reading frame 36 [Source:HGNC Symbol;Acc:HGNC:26170]161270.0000.1625No
66TTLL2tubulin tyrosine ligase like 2 [Source:HGNC Symbol;Acc:HGNC:21211]162840.0000.1583No
67HYAL4hyaluronidase 4 [Source:HGNC Symbol;Acc:HGNC:5323]163650.0000.1561No
68HRGhistidine rich glycoprotein [Source:HGNC Symbol;Acc:HGNC:5181]175160.0000.1250No
69SLC9A3solute carrier family 9 member A3 [Source:HGNC Symbol;Acc:HGNC:11073]175860.0000.1231No
70CHRNGcholinergic receptor nicotinic gamma subunit [Source:HGNC Symbol;Acc:HGNC:1967]178380.0000.1163No
71CHRM2cholinergic receptor muscarinic 2 [Source:HGNC Symbol;Acc:HGNC:1951]178480.0000.1161No
72IFNA17interferon alpha 17 [Source:HGNC Symbol;Acc:HGNC:5422]182000.0000.1066No
73PTPRCAPprotein tyrosine phosphatase receptor type C associated protein [Source:HGNC Symbol;Acc:HGNC:9667]182060.0000.1065No
74CXCL11C-X-C motif chemokine ligand 11 [Source:HGNC Symbol;Acc:HGNC:10638]189090.0000.0875No
75DSG3desmoglein 3 [Source:HGNC Symbol;Acc:HGNC:3050]189260.0000.0870No
76MSCmusculin [Source:HGNC Symbol;Acc:HGNC:7321]190410.0000.0839No
77BMP4bone morphogenetic protein 4 [Source:HGNC Symbol;Acc:HGNC:1071]190610.0000.0834No
78EPS8L3EPS8 like 3 [Source:HGNC Symbol;Acc:HGNC:21297]191240.0000.0817No
79NGFnerve growth factor [Source:HGNC Symbol;Acc:HGNC:7808]192620.0000.0780No
80HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]197470.0000.0649No
81NR1I3nuclear receptor subfamily 1 group I member 3 [Source:HGNC Symbol;Acc:HGNC:7969]199160.0000.0604No
82KLHDC8Akelch domain containing 8A [Source:HGNC Symbol;Acc:HGNC:25573]200660.0000.0564No
83TCF21transcription factor 21 [Source:HGNC Symbol;Acc:HGNC:11632]204350.0000.0464No
84KLK1kallikrein 1 [Source:HGNC Symbol;Acc:HGNC:6357]206210.0000.0414No
85EDN2endothelin 2 [Source:HGNC Symbol;Acc:HGNC:3177]211230.0000.0278No
86INSL5insulin like 5 [Source:HGNC Symbol;Acc:HGNC:6088]218560.0000.0080No
87INSL4insulin like 4 [Source:HGNC Symbol;Acc:HGNC:6087]218570.0000.0080No
88KRT17keratin 17 [Source:HGNC Symbol;Acc:HGNC:6427]219910.0000.0044No
89RASGRF1Ras protein specific guanine nucleotide releasing factor 1 [Source:HGNC Symbol;Acc:HGNC:9875]228880.000-0.0198No
90ATP1B4ATPase Na+/K+ transporting family member beta 4 [Source:HGNC Symbol;Acc:HGNC:808]233660.000-0.0327No
91FOXA1forkhead box A1 [Source:HGNC Symbol;Acc:HGNC:5021]236980.000-0.0417No
92NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]237020.000-0.0418No
93TCP10L3t-complex 10 like 3, pseudogene [Source:HGNC Symbol;Acc:HGNC:11656]238510.000-0.0458No
94IGKV3D-15immunoglobulin kappa variable 3D-15 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:5824]238670.000-0.0462No
95NPFFR1neuropeptide FF receptor 1 [Source:HGNC Symbol;Acc:HGNC:17425]242430.000-0.0563No
96CST5cystatin D [Source:HGNC Symbol;Acc:HGNC:2477]247340.000-0.0696No
97CHRNA9cholinergic receptor nicotinic alpha 9 subunit [Source:HGNC Symbol;Acc:HGNC:14079]247980.000-0.0713No
98PRSS21serine protease 21 [Source:HGNC Symbol;Acc:HGNC:9485]252520.000-0.0835No
99CAPN9calpain 9 [Source:HGNC Symbol;Acc:HGNC:1486]259210.000-0.1016No
100PAGE1PAGE family member 1 [Source:HGNC Symbol;Acc:HGNC:4107]265230.000-0.1179No
101MAGEA10MAGE family member A10 [Source:HGNC Symbol;Acc:HGNC:6797]265290.000-0.1180No
102ITIH5inter-alpha-trypsin inhibitor heavy chain 5 [Source:HGNC Symbol;Acc:HGNC:21449]269190.000-0.1285No
103ACEangiotensin I converting enzyme [Source:HGNC Symbol;Acc:HGNC:2707]270950.000-0.1333No
104BAATbile acid-CoA:amino acid N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:932]271170.000-0.1338No
105CLEC3BC-type lectin domain family 3 member B [Source:HGNC Symbol;Acc:HGNC:11891]27478-0.000-0.1436No
106THBDthrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784]27809-0.047-0.1518No
107MDFIMyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]27938-0.063-0.1544No
108FCHO1FCH and mu domain containing endocytic adaptor 1 [Source:HGNC Symbol;Acc:HGNC:29002]28020-0.069-0.1556No
109SLC5A5solute carrier family 5 member 5 [Source:HGNC Symbol;Acc:HGNC:11040]28148-0.087-0.1578No
110GRM2glutamate metabotropic receptor 2 [Source:HGNC Symbol;Acc:HGNC:4594]28698-0.150-0.1706No
111BRDTbromodomain testis associated [Source:HGNC Symbol;Acc:HGNC:1105]28769-0.159-0.1703No
112SRD5A3steroid 5 alpha-reductase 3 [Source:HGNC Symbol;Acc:HGNC:25812]28798-0.163-0.1687No
113RPL10P17ribosomal protein L10 pseudogene 17 [Source:HGNC Symbol;Acc:HGNC:52348]28884-0.176-0.1686No
114ZDHHC8P1ZDHHC8 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:26461]28976-0.188-0.1684No
115VILLvillin like [Source:HGNC Symbol;Acc:HGNC:30906]29154-0.207-0.1703No
116AGRPagouti related neuropeptide [Source:HGNC Symbol;Acc:HGNC:330]29287-0.222-0.1707No
117EGFL7EGF like domain multiple 7 [Source:HGNC Symbol;Acc:HGNC:20594]29961-0.308-0.1846No
118HHIPL2HHIP like 2 [Source:HGNC Symbol;Acc:HGNC:25842]30940-0.443-0.2048No
119SEC31BSEC31 homolog B, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:23197]31511-0.532-0.2128No
120GPR35G protein-coupled receptor 35 [Source:HGNC Symbol;Acc:HGNC:4492]31878-0.589-0.2144No
121TYROBPtransmembrane immune signaling adaptor TYROBP [Source:HGNC Symbol;Acc:HGNC:12449]32781-0.788-0.2277No
122CACNA1Scalcium voltage-gated channel subunit alpha1 S [Source:HGNC Symbol;Acc:HGNC:1397]32867-0.808-0.2186No
123DEPDC5DEP domain containing 5, GATOR1 subcomplex subunit [Source:HGNC Symbol;Acc:HGNC:18423]33100-0.866-0.2127No
124SPATA6spermatogenesis associated 6 [Source:HGNC Symbol;Acc:HGNC:18309]33727-1.039-0.2151No
125DRC3dynein regulatory complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25384]34344-1.232-0.2144No
126KIF21Bkinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]34959-1.495-0.2100No
127ECEL1endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]35104-1.571-0.1918No
128SEMA5Asemaphorin 5A [Source:HGNC Symbol;Acc:HGNC:10736]35200-1.625-0.1715No
129KLF3Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]35296-1.674-0.1505No
130PHLDA3pleckstrin homology like domain family A member 3 [Source:HGNC Symbol;Acc:HGNC:8934]35501-1.792-0.1308No
131H2AC13H2A clustered histone 13 [Source:HGNC Symbol;Acc:HGNC:4725]35693-1.922-0.1090No
132LFNGLFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]35917-2.097-0.0855No
133ABCA3ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]36191-2.319-0.0603No
134CSF1Rcolony stimulating factor 1 receptor [Source:HGNC Symbol;Acc:HGNC:2433]36638-2.886-0.0318No
135TREM2triggering receptor expressed on myeloid cells 2 [Source:HGNC Symbol;Acc:HGNC:17761]36765-3.1270.0088No
Table: GSEA details [plain text format]



Fig 2: KRAS.KIDNEY_UP.V1_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.KIDNEY_UP.V1_DN: Random ES distribution   
Gene set null distribution of ES for KRAS.KIDNEY_UP.V1_DN