Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_GAQ_versus_WT_NA.greenbergcls.cls
#WT_GAQ_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetKRAS.LUNG.BREAST_UP.V1_UP
Enrichment Score (ES)0.5809393
Normalized Enrichment Score (NES)1.5370439
Nominal p-value0.0
FDR q-value0.076719396
FWER p-Value0.06
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.LUNG.BREAST_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]34.9070.0591Yes
2CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]54.8590.1177Yes
3TRAF1TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]783.7820.1614Yes
4ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]1053.5850.2039Yes
5ISG20interferon stimulated exonuclease gene 20 [Source:HGNC Symbol;Acc:HGNC:6130]1553.2550.2419Yes
6IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]1763.1430.2793Yes
7LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]1773.1420.3172Yes
8TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]2312.8800.3505Yes
9GLRXglutaredoxin [Source:HGNC Symbol;Acc:HGNC:4330]2892.6310.3807Yes
10POLMDNA polymerase mu [Source:HGNC Symbol;Acc:HGNC:9185]3682.4340.4079Yes
11DHRS9dehydrogenase/reductase 9 [Source:HGNC Symbol;Acc:HGNC:16888]3712.4260.4371Yes
12ID2inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]3792.4110.4660Yes
13DOCK4dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:HGNC:19192]4392.2510.4916Yes
14MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]6571.8110.5076Yes
15IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]8831.5420.5201Yes
16CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]10861.3740.5312Yes
17HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]11931.2950.5439Yes
18GPR4G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:4497]13581.1750.5537Yes
19FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]14231.1400.5657Yes
20TNFSF15TNF superfamily member 15 [Source:HGNC Symbol;Acc:HGNC:11931]16181.0580.5732Yes
21MYH2myosin heavy chain 2 [Source:HGNC Symbol;Acc:HGNC:7572]20070.8970.5735Yes
22PRDM1PR/SET domain 1 [Source:HGNC Symbol;Acc:HGNC:9346]24600.7360.5702Yes
23SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]26120.6920.5744Yes
24ADAM8ADAM metallopeptidase domain 8 [Source:HGNC Symbol;Acc:HGNC:215]28310.6280.5761Yes
25OSBP2oxysterol binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8504]29240.6060.5809Yes
26RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]34590.4870.5724No
27SH2D2ASH2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:10821]40250.3850.5617No
28ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]41010.3730.5642No
29ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]43720.3280.5608No
30CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]45250.3040.5604No
31A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]46510.2880.5605No
32IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]48680.2520.5577No
33LAT2linker for activation of T cells family member 2 [Source:HGNC Symbol;Acc:HGNC:12749]50000.2310.5569No
34INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]53070.1850.5509No
35ADAMTS6ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]54900.1550.5478No
36MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]58380.1080.5397No
37TERTtelomerase reverse transcriptase [Source:HGNC Symbol;Acc:HGNC:11730]60090.0860.5362No
38BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]61740.0680.5326No
39NAV3neuron navigator 3 [Source:HGNC Symbol;Acc:HGNC:15998]64510.0320.5255No
40NDOR1NADPH dependent diflavin oxidoreductase 1 [Source:HGNC Symbol;Acc:HGNC:29838]65520.0210.5230No
41CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]67800.0000.5169No
42SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]69190.0000.5131No
43RNASE1ribonuclease A family member 1, pancreatic [Source:HGNC Symbol;Acc:HGNC:10044]76030.0000.4946No
44SLCO5A1solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]76230.0000.4941No
45CD247CD247 molecule [Source:HGNC Symbol;Acc:HGNC:1677]84570.0000.4716No
46SHOXshort stature homeobox [Source:HGNC Symbol;Acc:HGNC:10853]85070.0000.4703No
47CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]90950.0000.4544No
48CLSTN2calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]92020.0000.4515No
49ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]102340.0000.4236No
50FAM174Bfamily with sequence similarity 174 member B [Source:HGNC Symbol;Acc:HGNC:34339]107710.0000.4091No
51PPBPpro-platelet basic protein [Source:HGNC Symbol;Acc:HGNC:9240]112430.0000.3964No
52TFDP3transcription factor Dp family member 3 [Source:HGNC Symbol;Acc:HGNC:24603]114500.0000.3908No
53TSPAN1tetraspanin 1 [Source:HGNC Symbol;Acc:HGNC:20657]117750.0000.3820No
54CLPScolipase [Source:HGNC Symbol;Acc:HGNC:2085]119380.0000.3776No
55IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]120290.0000.3752No
56ESM1endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]121370.0000.3723No
57TAAR5trace amine associated receptor 5 [Source:HGNC Symbol;Acc:HGNC:30236]128350.0000.3534No
58GBA3glucosylceramidase beta 3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:19069]129410.0000.3506No
59RBP4retinol binding protein 4 [Source:HGNC Symbol;Acc:HGNC:9922]130800.0000.3469No
60RBMXL2RBMX like 2 [Source:HGNC Symbol;Acc:HGNC:17886]132040.0000.3435No
61GULP1GULP PTB domain containing engulfment adaptor 1 [Source:HGNC Symbol;Acc:HGNC:18649]133660.0000.3392No
62HOXD11homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]134370.0000.3373No
63OR2B6olfactory receptor family 2 subfamily B member 6 [Source:HGNC Symbol;Acc:HGNC:8241]136830.0000.3306No
64KIAA1549LKIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]138920.0000.3250No
65RELNreelin [Source:HGNC Symbol;Acc:HGNC:9957]140170.0000.3217No
66IL37interleukin 37 [Source:HGNC Symbol;Acc:HGNC:15563]140320.0000.3213No
67RETNresistin [Source:HGNC Symbol;Acc:HGNC:20389]141270.0000.3187No
68HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]145710.0000.3067No
69ZP4zona pellucida glycoprotein 4 [Source:HGNC Symbol;Acc:HGNC:15770]149430.0000.2967No
70SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]155800.0000.2795No
71G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]159320.0000.2700No
72IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]160050.0000.2680No
73AMELYamelogenin Y-linked [Source:HGNC Symbol;Acc:HGNC:462]161040.0000.2654No
74MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]172020.0000.2357No
75GRPgastrin releasing peptide [Source:HGNC Symbol;Acc:HGNC:4605]172040.0000.2357No
76CEACAM3CEA cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:1815]179060.0000.2167No
77IGHV3-48immunoglobulin heavy variable 3-48 [Source:HGNC Symbol;Acc:HGNC:5606]182500.0000.2074No
78BMP6bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073]190580.0000.1856No
79MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]190870.0000.1848No
80NRLneural retina leucine zipper [Source:HGNC Symbol;Acc:HGNC:8002]193650.0000.1773No
81CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]194290.0000.1756No
82CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]194380.0000.1754No
83CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]194400.0000.1754No
84TBX3T-box transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11602]196970.0000.1685No
85HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]197470.0000.1671No
86GABRA3gamma-aminobutyric acid type A receptor subunit alpha3 [Source:HGNC Symbol;Acc:HGNC:4077]199400.0000.1619No
87NR1H4nuclear receptor subfamily 1 group H member 4 [Source:HGNC Symbol;Acc:HGNC:7967]199410.0000.1619No
88PRLprolactin [Source:HGNC Symbol;Acc:HGNC:9445]200720.0000.1584No
89PRYPTPN13 like Y-linked [Source:HGNC Symbol;Acc:HGNC:14024]200790.0000.1582No
90KRT34keratin 34 [Source:HGNC Symbol;Acc:HGNC:6452]219470.0000.1077No
91CRCT1cysteine rich C-terminal 1 [Source:HGNC Symbol;Acc:HGNC:29875]221480.0000.1023No
92RMSTrhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]222330.0000.1000No
93CMKLR1chemerin chemokine-like receptor 1 [Source:HGNC Symbol;Acc:HGNC:2121]223950.0000.0957No
94CD1ACD1a molecule [Source:HGNC Symbol;Acc:HGNC:1634]229760.0000.0800No
95CCR6C-C motif chemokine receptor 6 [Source:HGNC Symbol;Acc:HGNC:1607]230150.0000.0790No
96NELL2neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]236200.0000.0626No
97SLC25A31solute carrier family 25 member 31 [Source:HGNC Symbol;Acc:HGNC:25319]236220.0000.0626No
98NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]237020.0000.0604No
99TSPY1testis specific protein Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:12381]237990.0000.0578No
100SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]241730.0000.0477No
101KCNK15potassium two pore domain channel subfamily K member 15 [Source:HGNC Symbol;Acc:HGNC:13814]242540.0000.0456No
102DNAH9dynein axonemal heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:2953]244230.0000.0410No
103FAM155Bfamily with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]244440.0000.0405No
104CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]245280.0000.0382No
105SNAP91synaptosome associated protein 91 [Source:HGNC Symbol;Acc:HGNC:14986]246930.0000.0338No
106IFNA8interferon alpha 8 [Source:HGNC Symbol;Acc:HGNC:5429]247090.0000.0334No
107CHRNA2cholinergic receptor nicotinic alpha 2 subunit [Source:HGNC Symbol;Acc:HGNC:1956]247880.0000.0313No
108HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]249330.0000.0274No
109PTPRRprotein tyrosine phosphatase receptor type R [Source:HGNC Symbol;Acc:HGNC:9680]250630.0000.0239No
110TTC22tetratricopeptide repeat domain 22 [Source:HGNC Symbol;Acc:HGNC:26067]252930.0000.0177No
111PRSS3serine protease 3 [Source:HGNC Symbol;Acc:HGNC:9486]253630.0000.0158No
112SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]254960.0000.0123No
113PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]255920.0000.0097No
114FNDC8fibronectin type III domain containing 8 [Source:HGNC Symbol;Acc:HGNC:25286]258610.0000.0024No
115ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]264360.000-0.0131No
116CD37CD37 molecule [Source:HGNC Symbol;Acc:HGNC:1666]27844-0.051-0.0506No
117AKT2AKT serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:392]27894-0.059-0.0512No
118CDSNcorneodesmosin [Source:HGNC Symbol;Acc:HGNC:1802]28024-0.070-0.0538No
119SEMA3Bsemaphorin 3B [Source:HGNC Symbol;Acc:HGNC:10724]28286-0.106-0.0596No
120STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]28490-0.129-0.0635No
121TAGLN3transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]28558-0.135-0.0637No
122LDB3LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710]28808-0.164-0.0685No
123OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]28923-0.181-0.0694No
124RPS4Y1ribosomal protein S4 Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:10425]29179-0.210-0.0738No
125KCNJ14potassium inwardly rectifying channel subfamily J member 14 [Source:HGNC Symbol;Acc:HGNC:6260]29387-0.236-0.0765No
126HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]29566-0.261-0.0782No
127MKRN3makorin ring finger protein 3 [Source:HGNC Symbol;Acc:HGNC:7114]30431-0.368-0.0971No
128CTNNA2catenin alpha 2 [Source:HGNC Symbol;Acc:HGNC:2510]33068-0.860-0.1581No
129GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]33288-0.920-0.1529No
130LILRA6leukocyte immunoglobulin like receptor A6 [Source:HGNC Symbol;Acc:HGNC:15495]33589-0.998-0.1490No
131ITPKAinositol-trisphosphate 3-kinase A [Source:HGNC Symbol;Acc:HGNC:6178]33787-1.051-0.1416No
132KCNC1potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]34640-1.344-0.1485No
133GYPCglycophorin C (Gerbich blood group) [Source:HGNC Symbol;Acc:HGNC:4704]34728-1.390-0.1341No
134KCNC2potassium voltage-gated channel subfamily C member 2 [Source:HGNC Symbol;Acc:HGNC:6234]34800-1.418-0.1189No
135PDE2Aphosphodiesterase 2A [Source:HGNC Symbol;Acc:HGNC:8777]34858-1.449-0.1029No
136ATG10autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]35048-1.542-0.0895No
137CCDC181coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]35228-1.640-0.0745No
138KIF5Ckinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]35718-1.937-0.0644No
139SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]36259-2.394-0.0501No
140ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]36327-2.453-0.0223No
141KIF5Akinesin family member 5A [Source:HGNC Symbol;Acc:HGNC:6323]36923-3.5610.0045No
Table: GSEA details [plain text format]



Fig 2: KRAS.LUNG.BREAST_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.LUNG.BREAST_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.LUNG.BREAST_UP.V1_UP