Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_GAQ_versus_WT_NA.greenbergcls.cls
#WT_GAQ_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetKRAS.LUNG_UP.V1_UP
Enrichment Score (ES)0.4652531
Normalized Enrichment Score (NES)1.2419149
Nominal p-value0.05050505
FDR q-value0.15417905
FWER p-Value0.608
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.LUNG_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]54.8590.0591Yes
2BCL2A1BCL2 related protein A1 [Source:HGNC Symbol;Acc:HGNC:991]394.2650.1102Yes
3TNNT2troponin T2, cardiac type [Source:HGNC Symbol;Acc:HGNC:11949]464.1580.1607Yes
4C3AR1complement C3a receptor 1 [Source:HGNC Symbol;Acc:HGNC:1319]623.9940.2090Yes
5ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]1053.5850.2515Yes
6IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]1763.1430.2879Yes
7DCBLD2discoidin, CUB and LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24627]2872.6330.3171Yes
8POLMDNA polymerase mu [Source:HGNC Symbol;Acc:HGNC:9185]3682.4340.3446Yes
9SLC6A4solute carrier family 6 member 4 [Source:HGNC Symbol;Acc:HGNC:11050]3772.4160.3738Yes
10DOCK4dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:HGNC:19192]4392.2510.3996Yes
11IKZF1IKAROS family zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:13176]7401.6950.4121Yes
12IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]8831.5420.4271Yes
13PRKG2protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]11371.3370.4365Yes
14HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]11931.2950.4508Yes
15NESnestin [Source:HGNC Symbol;Acc:HGNC:7756]12301.2650.4653Yes
16MYH2myosin heavy chain 2 [Source:HGNC Symbol;Acc:HGNC:7572]20070.8970.4552No
17ZBTB48zinc finger and BTB domain containing 48 [Source:HGNC Symbol;Acc:HGNC:4930]25680.7020.4486No
18SLC18A1solute carrier family 18 member A1 [Source:HGNC Symbol;Acc:HGNC:10934]25990.6950.4562No
19ADAM8ADAM metallopeptidase domain 8 [Source:HGNC Symbol;Acc:HGNC:215]28310.6280.4576No
20RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]34590.4870.4466No
21SH2D2ASH2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:10821]40250.3850.4360No
22EVI2Aecotropic viral integration site 2A [Source:HGNC Symbol;Acc:HGNC:3499]40640.3790.4396No
23ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]41010.3730.4432No
24MT3metallothionein 3 [Source:HGNC Symbol;Acc:HGNC:7408]41090.3730.4475No
25FBXO4F-box protein 4 [Source:HGNC Symbol;Acc:HGNC:13583]41730.3600.4502No
26ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]43720.3280.4489No
27HS3ST3A1heparan sulfate-glucosamine 3-sulfotransferase 3A1 [Source:HGNC Symbol;Acc:HGNC:5196]43770.3270.4527No
28IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]48680.2520.4426No
29ASGR2asialoglycoprotein receptor 2 [Source:HGNC Symbol;Acc:HGNC:743]52080.2000.4358No
30CYP4F8cytochrome P450 family 4 subfamily F member 8 [Source:HGNC Symbol;Acc:HGNC:2648]52370.1960.4374No
31INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]53070.1850.4378No
32CFAP69cilia and flagella associated protein 69 [Source:HGNC Symbol;Acc:HGNC:26107]53470.1790.4390No
33LRIG1leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]58670.1040.4262No
34WNT7AWnt family member 7A [Source:HGNC Symbol;Acc:HGNC:12786]63280.0490.4143No
35NAV3neuron navigator 3 [Source:HGNC Symbol;Acc:HGNC:15998]64510.0320.4114No
36NDOR1NADPH dependent diflavin oxidoreductase 1 [Source:HGNC Symbol;Acc:HGNC:29838]65520.0210.4090No
37CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]67800.0000.4028No
38SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]69190.0000.3991No
39CRYAAcrystallin alpha A [Source:HGNC Symbol;Acc:HGNC:2388]70360.0000.3959No
40RNASE1ribonuclease A family member 1, pancreatic [Source:HGNC Symbol;Acc:HGNC:10044]76030.0000.3806No
41SLCO5A1solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]76230.0000.3801No
42CD247CD247 molecule [Source:HGNC Symbol;Acc:HGNC:1677]84570.0000.3576No
43FRMD1FERM domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21240]88670.0000.3465No
44GRIP2glutamate receptor interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:23841]96950.0000.3241No
45CLEC4AC-type lectin domain family 4 member A [Source:HGNC Symbol;Acc:HGNC:13257]97790.0000.3219No
46NDNFneuron derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:26256]98110.0000.3210No
47KCNA5potassium voltage-gated channel subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:6224]100250.0000.3153No
48GRIN2Aglutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]106220.0000.2991No
49ADA2adenosine deaminase 2 [Source:HGNC Symbol;Acc:HGNC:1839]113250.0000.2801No
50CCT8L2chaperonin containing TCP1 subunit 8 like 2 [Source:HGNC Symbol;Acc:HGNC:15553]114110.0000.2778No
51N4BP2L2-IT2N4BPL2 intronic transcript 2 [Source:HGNC Symbol;Acc:HGNC:25038]116840.0000.2705No
52TSPAN1tetraspanin 1 [Source:HGNC Symbol;Acc:HGNC:20657]117750.0000.2680No
53PRG3proteoglycan 3, pro eosinophil major basic protein 2 [Source:HGNC Symbol;Acc:HGNC:9363]117810.0000.2679No
54NPHS1NPHS1 adhesion molecule, nephrin [Source:HGNC Symbol;Acc:HGNC:7908]119130.0000.2644No
55SLC6A11solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]120910.0000.2596No
56SIGLEC15sialic acid binding Ig like lectin 15 [Source:HGNC Symbol;Acc:HGNC:27596]121170.0000.2589No
57GBA3glucosylceramidase beta 3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:19069]129410.0000.2366No
58RBP4retinol binding protein 4 [Source:HGNC Symbol;Acc:HGNC:9922]130800.0000.2329No
59PPP1R14Dprotein phosphatase 1 regulatory inhibitor subunit 14D [Source:HGNC Symbol;Acc:HGNC:14953]132950.0000.2271No
60HOXD11homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]134370.0000.2233No
61LILRB1leukocyte immunoglobulin like receptor B1 [Source:HGNC Symbol;Acc:HGNC:6605]136480.0000.2176No
62OR2B6olfactory receptor family 2 subfamily B member 6 [Source:HGNC Symbol;Acc:HGNC:8241]136830.0000.2167No
63KIAA1549LKIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]138920.0000.2110No
64RELNreelin [Source:HGNC Symbol;Acc:HGNC:9957]140170.0000.2077No
65RETNresistin [Source:HGNC Symbol;Acc:HGNC:20389]141270.0000.2047No
66HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]145710.0000.1928No
67PCDH17protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]147900.0000.1869No
68RGS4regulator of G protein signaling 4 [Source:HGNC Symbol;Acc:HGNC:10000]149060.0000.1837No
69PAX4paired box 4 [Source:HGNC Symbol;Acc:HGNC:8618]149900.0000.1815No
70HTR75-hydroxytryptamine receptor 7 [Source:HGNC Symbol;Acc:HGNC:5302]156550.0000.1635No
71BTCbetacellulin [Source:HGNC Symbol;Acc:HGNC:1121]157700.0000.1604No
72G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]159320.0000.1561No
73FUT5fucosyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4016]177380.0000.1072No
74TAS2R1taste 2 receptor member 1 [Source:HGNC Symbol;Acc:HGNC:14909]179820.0000.1007No
75SEMG2semenogelin 2 [Source:HGNC Symbol;Acc:HGNC:10743]183110.0000.0918No
76MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]190870.0000.0708No
77NKX2-5NK2 homeobox 5 [Source:HGNC Symbol;Acc:HGNC:2488]191850.0000.0682No
78NGFnerve growth factor [Source:HGNC Symbol;Acc:HGNC:7808]192620.0000.0661No
79MIR124-1HGMIR124-1 host gene [Source:HGNC Symbol;Acc:HGNC:27231]194200.0000.0619No
80CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]194290.0000.0617No
81CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]194400.0000.0614No
82TBX3T-box transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11602]196970.0000.0545No
83ADAMTS3ADAM metallopeptidase with thrombospondin type 1 motif 3 [Source:HGNC Symbol;Acc:HGNC:219]199880.0000.0466No
84IGSF1immunoglobulin superfamily member 1 [Source:HGNC Symbol;Acc:HGNC:5948]206220.0000.0295No
85MMP20matrix metallopeptidase 20 [Source:HGNC Symbol;Acc:HGNC:7167]208360.0000.0237No
86ZNF749zinc finger protein 749 [Source:HGNC Symbol;Acc:HGNC:32783]210180.0000.0188No
87SLC16A8solute carrier family 16 member 8 [Source:HGNC Symbol;Acc:HGNC:16270]213880.0000.0088No
88KIR2DL3killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 3 [Source:HGNC Symbol;Acc:HGNC:6331]216150.0000.0027No
89CYP2J2cytochrome P450 family 2 subfamily J member 2 [Source:HGNC Symbol;Acc:HGNC:2634]227070.000-0.0268No
90CD1ACD1a molecule [Source:HGNC Symbol;Acc:HGNC:1634]229760.000-0.0341No
91CD48CD48 molecule [Source:HGNC Symbol;Acc:HGNC:1683]230370.000-0.0357No
92CD80CD80 molecule [Source:HGNC Symbol;Acc:HGNC:1700]230970.000-0.0373No
93DEFA5defensin alpha 5 [Source:HGNC Symbol;Acc:HGNC:2764]235470.000-0.0494No
94NELL2neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]236200.000-0.0514No
95TSPY1testis specific protein Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:12381]237990.000-0.0562No
96ADCYAP1R1ADCYAP receptor type I [Source:HGNC Symbol;Acc:HGNC:242]242710.000-0.0689No
97ALLCallantoicase [Source:HGNC Symbol;Acc:HGNC:17377]243220.000-0.0703No
98IFNA8interferon alpha 8 [Source:HGNC Symbol;Acc:HGNC:5429]247090.000-0.0807No
99PTPRRprotein tyrosine phosphatase receptor type R [Source:HGNC Symbol;Acc:HGNC:9680]250630.000-0.0903No
100ANO1anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]250890.000-0.0910No
101TEX13Atestis expressed 13A [Source:HGNC Symbol;Acc:HGNC:11735]251580.000-0.0928No
102TTC22tetratricopeptide repeat domain 22 [Source:HGNC Symbol;Acc:HGNC:26067]252930.000-0.0964No
103SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]254960.000-0.1019No
104PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]255920.000-0.1045No
105FNDC8fibronectin type III domain containing 8 [Source:HGNC Symbol;Acc:HGNC:25286]258610.000-0.1117No
106ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]264360.000-0.1273No
107MAGEA6MAGE family member A6 [Source:HGNC Symbol;Acc:HGNC:6804]266820.000-0.1339No
108TMEM238Ltransmembrane protein 238 like [Source:HGNC Symbol;Acc:HGNC:44356]268220.000-0.1377No
109CELA2Bchymotrypsin like elastase 2B [Source:HGNC Symbol;Acc:HGNC:29995]270620.000-0.1441No
110TMEM176Btransmembrane protein 176B [Source:HGNC Symbol;Acc:HGNC:29596]27604-0.021-0.1585No
111AKT2AKT serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:392]27894-0.059-0.1656No
112LINC00472long intergenic non-protein coding RNA 472 [Source:HGNC Symbol;Acc:HGNC:21380]28263-0.103-0.1743No
113UGT1A10UDP glucuronosyltransferase family 1 member A10 [Source:HGNC Symbol;Acc:HGNC:12531]28451-0.124-0.1779No
114LDB3LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710]28808-0.164-0.1855No
115HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]29566-0.261-0.2028No
116SARM1sterile alpha and TIR motif containing 1 [Source:HGNC Symbol;Acc:HGNC:17074]29863-0.294-0.2072No
117EGFL7EGF like domain multiple 7 [Source:HGNC Symbol;Acc:HGNC:20594]29961-0.308-0.2061No
118ZNF821zinc finger protein 821 [Source:HGNC Symbol;Acc:HGNC:28043]30294-0.350-0.2108No
119DOCK2dedicator of cytokinesis 2 [Source:HGNC Symbol;Acc:HGNC:2988]30445-0.370-0.2104No
120LAG3lymphocyte activating 3 [Source:HGNC Symbol;Acc:HGNC:6476]30639-0.398-0.2107No
121CLSTN3calsyntenin 3 [Source:HGNC Symbol;Acc:HGNC:18371]30846-0.429-0.2111No
122GPR3G protein-coupled receptor 3 [Source:HGNC Symbol;Acc:HGNC:4484]30878-0.433-0.2067No
123AURKCaurora kinase C [Source:HGNC Symbol;Acc:HGNC:11391]31498-0.530-0.2169No
124OGDHLoxoglutarate dehydrogenase like [Source:HGNC Symbol;Acc:HGNC:25590]31634-0.554-0.2138No
125FABP3fatty acid binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3557]32116-0.635-0.2191No
126ZBTB44zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]32449-0.711-0.2194No
127ABCB1ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]32690-0.765-0.2166No
128B3GNTL1UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]34615-1.337-0.2524No
129SDCCAG8SHH signaling and ciliogenesis regulator SDCCAG8 [Source:HGNC Symbol;Acc:HGNC:10671]34680-1.362-0.2375No
130BANK1B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]34714-1.382-0.2216No
131JAK3Janus kinase 3 [Source:HGNC Symbol;Acc:HGNC:6193]35027-1.533-0.2113No
132ATG10autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]35048-1.542-0.1931No
133KIF5Ckinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]35718-1.937-0.1876No
134TMEM158transmembrane protein 158 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:30293]36007-2.156-0.1691No
135SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]36259-2.394-0.1467No
136ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]36327-2.453-0.1186No
137NRP1neuropilin 1 [Source:HGNC Symbol;Acc:HGNC:8004]36356-2.490-0.0890No
138HROBhomologous recombination factor with OB-fold [Source:HGNC Symbol;Acc:HGNC:28460]36414-2.564-0.0593No
139CYTIPcytohesin 1 interacting protein [Source:HGNC Symbol;Acc:HGNC:9506]36617-2.861-0.0299No
140CX3CR1C-X3-C motif chemokine receptor 1 [Source:HGNC Symbol;Acc:HGNC:2558]36902-3.5030.0051No
Table: GSEA details [plain text format]



Fig 2: KRAS.LUNG_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.LUNG_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.LUNG_UP.V1_UP